ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, ... 609 e-171
2gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (U... 428 e-117
3gb|BT019213.1| Zea mays clone Contig886.F mRNA sequence 226 5e-56
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
6dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
7dbj|AK111741.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
8dbj|AK104898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
10gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
11emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 168 1e-38
12emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa... 168 1e-38
13emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 168 1e-38
14gb|BT019260.1| Zea mays clone Contig933.F mRNA sequence 74 4e-10
15gb|BT018436.1| Zea mays clone EL01N0372B11.d mRNA sequence 74 4e-10
16gb|AY103697.1| Zea mays PCO090876 mRNA sequence 66 1e-07
17gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, ... 58 3e-05
18ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
20dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
21dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
22ref|NM_128566.3| Arabidopsis thaliana ATUBA1; ubiquitin activati... 46 0.100
23gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 ma... 46 0.100
24gb|AY090248.1| Arabidopsis thaliana At2g30110/T27E13.15 mRNA, co... 46 0.100
25dbj|AK220705.1| Arabidopsis thaliana mRNA for putative ubiquitin... 46 0.100
26gb|BT006363.1| Arabidopsis thaliana At2g30110/T27E13.15 gene, co... 46 0.100
27gb|U80808.1|ATU80808 Arabidopsis thaliana ubiquitin activating e... 46 0.100
28emb|BX821151.1|CNS0AAA1 Arabidopsis thaliana Full-length cDNA Co... 46 0.100
29emb|BX820519.1|CNS0A9M5 Arabidopsis thaliana Full-length cDNA Co... 46 0.100
30emb|BX820277.1|CNS0A9OY Arabidopsis thaliana Full-length cDNA Co... 46 0.100
31gb|BC076655.1| Xenopus tropicalis matrin 3, mRNA (cDNA clone MGC... 44 0.39
32gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete se... 44 0.39
33ref|NM_001006791.1| Xenopus tropicalis matrin 3 (matr3), mRNA 44 0.39
34emb|AJ299395.1|CAR299395 Cicer arietinum partial mRNA for ubiqui... 44 0.39
35emb|CR761638.2| Xenopus tropicalis finished cDNA, clone TGas107n11 44 0.39
36dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, com... 40 6.1
39ref|XM_752686.1| Ustilago maydis 521 hypothetical protein (UM016... 40 6.1
40ref|XM_753433.1| Ustilago maydis 521 hypothetical protein (UM023... 40 6.1
41gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.1
42gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.1
43emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on ch... 40 6.1
44dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010 40 6.1
45gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Can... 40 6.1
46gb|AF231794.1|AF231794 Pinus taeda clone LC15b2 microsatellite s... 40 6.1
47emb|Z65094.1|HS19B9F H.sapiens CpG island DNA genomic Mse1 fragm... 40 6.1
48emb|AM236324.1| Escherichia coli genome fragment containing the ... 40 6.1 
>gb|M90663.1|WHTE1A Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3695

 Score =  609 bits (307), Expect = e-171
 Identities = 408/439 (92%), Gaps = 2/439 (0%)
 Strand = Plus / Minus

                                                                        
Query: 19   agatgatgttgtgcgt-gtcttgtgaatcgtgatgtctggtaacaactccagatcagccc 77
            |||||||||||||| | |||| |||||| || ||||||||||||||| | ||||||||||
Sbjct: 3653 agatgatgttgtgcctagtctcgtgaatagttatgtctggtaacaacccgagatcagccc 3594

                                                                        
Query: 78   ccaatgatccaatcgacatcgagatggtagaaaggaaaa-tcagtcagtaatgtggctta 136
            |||||||||| ||||||||| |||||||||||||||||| ||||||  ||||||||||||
Sbjct: 3593 ccaatgatccgatcgacatcaagatggtagaaaggaaaaatcagtcgataatgtggctta 3534

                                                                        
Query: 137  agcccccactcagcttacagtcactaatgcaactcatgacttgtcagtcgatcaggcatg 196
            ||||||||||||||||||| |||||||||| ||||||||| ||||||||||||  |||||
Sbjct: 3533 agcccccactcagcttacaatcactaatgcgactcatgacatgtcagtcgatccagcatg 3474

                                                                        
Query: 197  accaaccacaagatcatgtgaacacagatgaagcgcttcttcagcggaagtagacagaca 256
            ||||||||||||||||||| ||| |||| | |||||||||||||||||||||||| ||||
Sbjct: 3473 accaaccacaagatcatgtaaacgcagaaggagcgcttcttcagcggaagtagaccgaca 3414

                                                                        
Query: 257  caagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccaccacgacgtcgagat 316
            |||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 3413 caagtgggatgtcgacatcgttgtcgtcgtcatcctcacaggccaccacaacgtcgagat 3354

                                                                        
Query: 317  gacgccggtaagagggcacctccatcttggccacctccctggcaacatcaactacctttc 376
            |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
Sbjct: 3353 gacgccggtaagagggcacctccatcttagccacctccctggcaacatcaacaaccttcc 3294

                                                                        
Query: 377  tgtcaagccgttccttgtgcctggggaacatagagttgtagagcagcgaggtgccacagg 436
            ||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||
Sbjct: 3293 tgtcaagccgttccttgtgcctggggaacatggagttgtacagcagagaggtgccacagg 3234

                               
Query: 437  atatgctgtaagcgttcag 455
            |||||||||||||||||||
Sbjct: 3233 atatgctgtaagcgttcag 3215
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>gb|M55604.1|WHTUBA1 T.aestivum ubiquitin activating enzyme E1 (UBA1) gene, complete cds
          Length = 3586

 Score =  428 bits (216), Expect = e-117
 Identities = 261/276 (94%)
 Strand = Plus / Minus

                                                                        
Query: 180  tcagtcgatcaggcatgaccaaccacaagatcatgtgaacacagatgaagcgcttcttca 239
            ||||| ||||| |||||||||||||||||||||| | ||| |||| | ||||||||||||
Sbjct: 3395 tcagtagatcaagcatgaccaaccacaagatcatttaaacgcagaaggagcgcttcttca 3336

                                                                        
Query: 240  gcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggc 299
            |||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||| ||
Sbjct: 3335 gcggaagtagaccgacacaagtgggatgtcgacatcattgtcgtcgtcatcctcacacgc 3276

                                                                        
Query: 300  caccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctccctggc 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3275 caccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctccctggc 3216

                                                                        
Query: 360  aacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttgtagag 419
            ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 3215 aacatcaactaccttcctgtcaagccgttccttgtgcctggggaacatggagttgtacag 3156

                                                
Query: 420  cagcgaggtgccacaggatatgctgtaagcgttcag 455
            ||||||||||||||||||||||||||||||||||||
Sbjct: 3155 cagcgaggtgccacaggatatgctgtaagcgttcag 3120



 Score =  167 bits (84), Expect = 4e-38
 Identities = 122/132 (92%), Gaps = 2/132 (1%)
 Strand = Plus / Minus

                                                                        
Query: 19   agatgatgttgtgcgt-gtcttgtgaatcgtgatgtctggtaacaactccagatcagccc 77
            |||||||||||||| | |||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 3534 agatgatgttgtgcctagtctcgtgaatcatgatgtctggtaacaacccgagatcagccc 3475

                                                                        
Query: 78   ccaatgatccaatcgacatcga-gatggtagaaaggaaaatcagtcagtaatgtggctta 136
            |||||||||| ||||||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct: 3474 ccaatgatccgatcgacatcaaagatggtagaaaggaaaatcagtcggtaatgtggctta 3415

                        
Query: 137  agcccccactca 148
            ||||||||||||
Sbjct: 3414 agcccccactca 3403
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>gb|BT019213.1| Zea mays clone Contig886.F mRNA sequence
          Length = 836

 Score =  226 bits (114), Expect = 5e-56
 Identities = 189/214 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggcc 300
           |||||||| | ||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 779 cggaagtaaatagacacaagcgggatgtcgacgtcattgtcatcgtcatcctcacaggcc 720

                                                                       
Query: 301 accacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctccctggca 360
           ||||| ||||| ||||| || ||||| || |||||||||| |||||||||||||||||| 
Sbjct: 719 accacaacgtccagatggcggcggtaggaaggcacctccaccttggccacctccctggcc 660

                                                                       
Query: 361 acatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttgtagagc 420
           ||||| || |||||  |||| ||||| |||||||| || |||||||| |||||||| |||
Sbjct: 659 acatccaccaccttcttgtccagccgctccttgtgtctcgggaacatggagttgtacagc 600

                                             
Query: 421 agcgaggtgccacaggatatgctgtaagcgttca 454
           |||||||| || |||||||||||||| |||||||
Sbjct: 599 agcgaggtcccgcaggatatgctgtacgcgttca 566
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                          
Query: 235    cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
              ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 312150 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 312209

                                                                          
Query: 295    caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
              || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 312210 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 312269

                                                                          
Query: 355    ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
              || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 312270 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 312329

                                                       
Query: 415    tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
              || |||||||||||||| || ||||||||||| || |||||
Sbjct: 312330 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 312370



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 121    tcagtaatgtggcttaagcccccactcagcttacag 156
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 312039 tcagtaatgtggcttaaacccccacttagtttacag 312074
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                          
Query: 235    cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
              ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 295048 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 295107

                                                                          
Query: 295    caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
              || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 295108 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 295167

                                                                          
Query: 355    ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
              || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 295168 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 295227

                                                       
Query: 415    tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
              || |||||||||||||| || ||||||||||| || |||||
Sbjct: 295228 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 295268



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 121    tcagtaatgtggcttaagcccccactcagcttacag 156
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 294937 tcagtaatgtggcttaaacccccacttagtttacag 294972
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>dbj|AK111781.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083B12, full
            insert sequence
          Length = 3724

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
            ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 3469 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 3410

                                                                        
Query: 295  caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
            || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 3409 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 3350

                                                                        
Query: 355  ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
            || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 3349 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 3290

                                                     
Query: 415  tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
            || |||||||||||||| || ||||||||||| || |||||
Sbjct: 3289 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 3249



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 121  tcagtaatgtggcttaagcccccactcagcttacag 156
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 3580 tcagtaatgtggcttaaacccccacttagtttacag 3545
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>dbj|AK111741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049I12, full
            insert sequence
          Length = 1533

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
            ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 1362 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 1303

                                                                        
Query: 295  caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
            || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 1302 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 1243

                                                                        
Query: 355  ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
            || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 1242 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 1183

                                                     
Query: 415  tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
            || |||||||||||||| || ||||||||||| || |||||
Sbjct: 1182 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 1142



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 121  tcagtaatgtggcttaagcccccactcagcttacag 156
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 1473 tcagtaatgtggcttaaacccccacttagtttacag 1438
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>dbj|AK104898.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C03, full
            insert sequence
          Length = 1510

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
            ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 1253 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 1194

                                                                        
Query: 295  caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
            || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 1193 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 1134

                                                                        
Query: 355  ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
            || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 1133 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 1074

                                                     
Query: 415  tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
            || |||||||||||||| || ||||||||||| || |||||
Sbjct: 1073 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 1033



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 121  tcagtaatgtggcttaagcccccactcagcttacag 156
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 1364 tcagtaatgtggcttaaacccccacttagtttacag 1329
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                          
Query: 235    cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
              ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 295048 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 295107

                                                                          
Query: 295    caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
              || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 295108 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 295167

                                                                          
Query: 355    ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
              || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 295168 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 295227

                                                       
Query: 415    tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
              || |||||||||||||| || ||||||||||| || |||||
Sbjct: 295228 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 295268



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 121    tcagtaatgtggcttaagcccccactcagcttacag 156
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 294937 tcagtaatgtggcttaaacccccacttagtttacag 294972
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                          
Query: 235    cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
              ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 312150 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 312209

                                                                          
Query: 295    caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
              || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 312210 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 312269

                                                                          
Query: 355    ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
              || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 312270 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 312329

                                                       
Query: 415    tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
              || |||||||||||||| || ||||||||||| || |||||
Sbjct: 312330 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 312370



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 121    tcagtaatgtggcttaagcccccactcagcttacag 156
              ||||||||||||||||| |||||||| || ||||||
Sbjct: 312039 tcagtaatgtggcttaaacccccacttagtttacag 312074
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>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 160673

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Minus

                                                                        
Query: 235  cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
            ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 9945 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 9886

                                                                        
Query: 295  caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
            || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 9885 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 9826

                                                                        
Query: 355  ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
            || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 9825 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 9766

                                                     
Query: 415  tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
            || |||||||||||||| || ||||||||||| || |||||
Sbjct: 9765 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 9725



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 121   tcagtaatgtggcttaagcccccactcagcttacag 156
             ||||||||||||||||| |||||||| || ||||||
Sbjct: 10056 tcagtaatgtggcttaaacccccacttagtttacag 10021
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>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152222

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                         
Query: 235   cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
             ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 45201 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 45260

                                                                         
Query: 295   caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
             || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 45261 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 45320

                                                                         
Query: 355   ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
             || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 45321 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 45380

                                                      
Query: 415   tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
             || |||||||||||||| || ||||||||||| || |||||
Sbjct: 45381 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 45421



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 121   tcagtaatgtggcttaagcccccactcagcttacag 156
             ||||||||||||||||| |||||||| || ||||||
Sbjct: 45090 tcagtaatgtggcttaaacccccacttagtttacag 45125
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa
            from chromosome 11 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 164143

 Score =  168 bits (85), Expect = 1e-38
 Identities = 187/221 (84%)
 Strand = Plus / Plus

                                                                        
Query: 235  cttcagcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctca 294
            ||||| ||||||||||  || || || |||||||| || ||||||||||| || ||||||
Sbjct: 2366 cttcaccggaagtagattgataccagtgggatgtcaacgtcgttgtcatcatcgtcctca 2425

                                                                        
Query: 295  caggccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctcc 354
            || |||||||| ||||| ||||| |||||||| | ||||||||||| ||| |||||||||
Sbjct: 2426 caagccaccaccacgtcaagatggcgccggtatgggggcacctccacctttgccacctcc 2485

                                                                        
Query: 355  ctggcaacatcaactacctttctgtcaagccgttccttgtgcctggggaacatagagttg 414
            || || ||||| || |||||  |||| || || ||||||||||| |||||||| ||||||
Sbjct: 2486 ctcgccacatcgaccaccttcttgtctagacgctccttgtgcctcgggaacattgagttg 2545

                                                     
Query: 415  tagagcagcgaggtgccacaggatatgctgtaagcgttcag 455
            || |||||||||||||| || ||||||||||| || |||||
Sbjct: 2546 tacagcagcgaggtgccgcaagatatgctgtatgcattcag 2586



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 121  tcagtaatgtggcttaagcccccactcagcttacag 156
            ||||||||||||||||| |||||||| || ||||||
Sbjct: 2255 tcagtaatgtggcttaaacccccacttagtttacag 2290
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>gb|BT019260.1| Zea mays clone Contig933.F mRNA sequence
          Length = 771

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                       
Query: 334 acctccatcttggccacctccctggcaacatcaactacctttctgtcaagccgttccttg 393
           ||||||| |||||||||||||||||| |||||||| ||||| || |  ||||  ||||||
Sbjct: 307 acctccaccttggccacctccctggcgacatcaaccaccttcctctgcagcctctccttg 366

                                                                
Query: 394 tgcctggggaacatagagttgtagagcagcgaggtgccacaggatatgctgta 446
           ||||| | ||||||   |||||| |||||  ||||||| ||||| ||||||||
Sbjct: 367 tgcctcgcgaacatgctgttgtacagcagacaggtgccgcaggacatgctgta 419
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>gb|BT018436.1| Zea mays clone EL01N0372B11.d mRNA sequence
          Length = 1726

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                        
Query: 334  acctccatcttggccacctccctggcaacatcaactacctttctgtcaagccgttccttg 393
            ||||||| |||||||||||||||||| |||||||| ||||| || |  ||||  ||||||
Sbjct: 1463 acctccaccttggccacctccctggcgacatcaaccaccttcctctgcagcctctccttg 1404

                                                                 
Query: 394  tgcctggggaacatagagttgtagagcagcgaggtgccacaggatatgctgta 446
            ||||| | ||||||   |||||| |||||  ||||||| ||||| ||||||||
Sbjct: 1403 tgcctcgcgaacatgctgttgtacagcagacaggtgccgcaggacatgctgta 1351
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>gb|AY103697.1| Zea mays PCO090876 mRNA sequence
          Length = 1314

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 111/135 (82%), Gaps = 2/135 (1%)
 Strand = Plus / Minus

                                                                        
Query: 313  agatgacgccggtaagagggcacctccatcttggcca-cctccctggcaacatcaactac 371
            ||||| || ||||| || ||||| |||| |||||||| | |||||||| | |||||| ||
Sbjct: 1188 agatggcggcggtaggaaggcacntccaacttggccaacntccctggccaaatcaaccac 1129

                                                                        
Query: 372  ctttctgtcaagccgttccttgtgcctggggaacatagagttgtagagcagcgaggtgcc 431
             | | |||| ||||| |||||||| || |||||||| |||||||| |||| |||||| ||
Sbjct: 1128 ttct-tgtccagccgctccttgtgtctcgggaacatggagttgtacagcatcgaggtccc 1070

                           
Query: 432  acaggatatgctgta 446
             || |||||||||||
Sbjct: 1069 gcatgatatgctgta 1055
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>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds
          Length = 3588

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 98/121 (80%)
 Strand = Plus / Minus

                                                                        
Query: 239  agcggaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacagg 298
            |||||||||| || ||||| || ||||||||||| ||||| || || || ||||| ||||
Sbjct: 3345 agcggaagtaaaccgacacgagggggatgtcgacgtcgttctcgtcctcgtcctcgcagg 3286

                                                                        
Query: 299  ccaccacgacgtcgagatgacgccggtaagagggcacctccatcttggccacctccctgg 358
            ||||  ||| ||| || || | ||||||   ||| || |||| |||||||||||||||||
Sbjct: 3285 ccacgccgatgtccaggtgcctccggtactcggggacgtccaccttggccacctccctgg 3226

             
Query: 359  c 359
            |
Sbjct: 3225 c 3225
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>ref|NM_185567.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3522

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 411  gttgtagagcagcgaggtgccacaggatatgctgtaagcg 450
            |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 3186 gttgtacagcagcgaagtgccacaggaaatgctgtaagcg 3147
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 411      gttgtagagcagcgaggtgccacaggatatgctgtaagcg 450
                |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 29429685 gttgtacagcagcgaagtgccacaggaaatgctgtaagcg 29429646



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 420      cagcgaggtgccacaggatat 440
                |||||||||||||||||||||
Sbjct: 28149367 cagcgaggtgccacaggatat 28149387
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>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0034A04
          Length = 151263

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 411   gttgtagagcagcgaggtgccacaggatatgctgtaagcg 450
             |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 92607 gttgtacagcagcgaagtgccacaggaaatgctgtaagcg 92568
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>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full
            insert sequence
          Length = 3522

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 418  agcagcgaggtgccacaggatatgctgtaagcg 450
            |||||||| ||||||||||| ||||||||||||
Sbjct: 3179 agcagcgaagtgccacaggaaatgctgtaagcg 3147
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>ref|NM_128566.3| Arabidopsis thaliana ATUBA1; ubiquitin activating enzyme AT2G30110
            (ATUBA1) mRNA, complete cds
          Length = 3626

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
            |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 3360 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3301

               
Query: 303  cac 305
            |||
Sbjct: 3300 cac 3298
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>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete
             sequence
          Length = 83796

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 243   gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
             |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 53002 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 52943

                
Query: 303   cac 305
             |||
Sbjct: 52942 cac 52940
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>gb|AY090248.1| Arabidopsis thaliana At2g30110/T27E13.15 mRNA, complete cds
          Length = 3561

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
            |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 3321 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3262

               
Query: 303  cac 305
            |||
Sbjct: 3261 cac 3259
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>dbj|AK220705.1| Arabidopsis thaliana mRNA for putative ubiquitin activating enzyme,
           complete cds, clone: RAFL22-01-B01
          Length = 474

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 243 gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
           |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 208 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 149

              
Query: 303 cac 305
           |||
Sbjct: 148 cac 146
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>gb|BT006363.1| Arabidopsis thaliana At2g30110/T27E13.15 gene, complete cds
          Length = 3243

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
            |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 3237 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3178

               
Query: 303  cac 305
            |||
Sbjct: 3177 cac 3175
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>gb|U80808.1|ATU80808 Arabidopsis thaliana ubiquitin activating enzyme (UBA1) gene,
            complete cds
          Length = 3346

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
            |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 3334 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 3275

               
Query: 303  cac 305
            |||
Sbjct: 3274 cac 3272
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>emb|BX821151.1|CNS0AAA1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL1ZD10 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 646

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 243 gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
           |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 390 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 331

              
Query: 303 cac 305
           |||
Sbjct: 330 cac 328
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>emb|BX820519.1|CNS0A9M5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH43ZE11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1375

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
            |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 1167 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 1108

               
Query: 303  cac 305
            |||
Sbjct: 1107 cac 1105
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>emb|BX820277.1|CNS0A9OY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH16ZF09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 930

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                       
Query: 243 gaagtagacagacacaagcgggatgtcgacatcgttgtcatcgtcatcctcacaggccac 302
           |||||||| ||| || || || || ||||| || |||||||| ||||||||||| |||||
Sbjct: 673 gaagtagatagagacgagaggaatatcgacgtcattgtcatcttcatcctcacaagccac 614

              
Query: 303 cac 305
           |||
Sbjct: 613 cac 611
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>gb|BC076655.1| Xenopus tropicalis matrin 3, mRNA (cDNA clone MGC:79524
            IMAGE:6977687), complete cds
          Length = 3174

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 334  acctccatcttggccacctccc 355
            ||||||||||||||||||||||
Sbjct: 1307 acctccatcttggccacctccc 1286
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>gb|AC151307.2| Xenopus tropicalis clone CH216-61M14, complete sequence
          Length = 164963

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 334   acctccatcttggccacctccc 355
             ||||||||||||||||||||||
Sbjct: 87684 acctccatcttggccacctccc 87705
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>ref|NM_001006791.1| Xenopus tropicalis matrin 3 (matr3), mRNA
          Length = 3174

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 334  acctccatcttggccacctccc 355
            ||||||||||||||||||||||
Sbjct: 1307 acctccatcttggccacctccc 1286
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>emb|AJ299395.1|CAR299395 Cicer arietinum partial mRNA for ubiquitin activating enzyme E1
           (ORF), clone CanUBC-1
          Length = 807

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 277 ttgtcatcgtcatcctcacaggccac 302
           ||||||||||||||||| ||||||||
Sbjct: 484 ttgtcatcgtcatcctcgcaggccac 459
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>emb|CR761638.2| Xenopus tropicalis finished cDNA, clone TGas107n11
          Length = 1855

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 334  acctccatcttggccacctccc 355
            ||||||||||||||||||||||
Sbjct: 1179 acctccatcttggccacctccc 1158
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>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0625E02
          Length = 153921

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 420  cagcgaggtgccacaggatat 440
            |||||||||||||||||||||
Sbjct: 4912 cagcgaggtgccacaggatat 4932
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>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0450A04
          Length = 162545

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 420    cagcgaggtgccacaggatat 440
              |||||||||||||||||||||
Sbjct: 132663 cagcgaggtgccacaggatat 132683
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>gb|AC115722.12| Mus musculus chromosome 5, clone RP23-16N23, complete sequence
          Length = 194380

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    acatcgttgtcatcgtcatc 290
              ||||||||||||||||||||
Sbjct: 158321 acatcgttgtcatcgtcatc 158340
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>ref|XM_752686.1| Ustilago maydis 521 hypothetical protein (UM01632.1) partial mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 267 gtcgacatcgttgtcatcgtcatc 290
           |||| |||||||||||||||||||
Sbjct: 585 gtcgtcatcgttgtcatcgtcatc 562
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>ref|XM_753433.1| Ustilago maydis 521 hypothetical protein (UM02379.1) partial mRNA
          Length = 3270

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  tcacaggccaccacgacgtc 311
            ||||||||||||||||||||
Sbjct: 2191 tcacaggccaccacgacgtc 2210
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 37      cttgtgaatcgtgatgtctg 56
               ||||||||||||||||||||
Sbjct: 2258336 cttgtgaatcgtgatgtctg 2258355
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 37      cttgtgaatcgtgatgtctg 56
               ||||||||||||||||||||
Sbjct: 2109514 cttgtgaatcgtgatgtctg 2109533
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>emb|AL591845.27| Human DNA sequence from clone RP11-268J15 on chromosome 1 Contains the
             3' end of a novel gene for thyroid hormone
             receptor-associated protein, 150 kDa subunit (TRAP150)
             (FLJ22082), a novel transcript (FLJ22938), a gene for a
             novel protein (FLJ10647), the 3' end of a gene for
             Ser/Thr-like kinase (MGC4796) and two CpG islands,
             complete sequence
          Length = 104307

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   ccacctccctggcaacatca 366
             ||||||||||||||||||||
Sbjct: 67335 ccacctccctggcaacatca 67354
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>dbj|AP007175.1| Aspergillus oryzae RIB40 genomic DNA, SC010
          Length = 2039961

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 225     tgaagcgcttcttcagcgga 244
               ||||||||||||||||||||
Sbjct: 1983686 tgaagcgcttcttcagcgga 1983705
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>gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 189286

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     gagatggtagaaaggaaaat 117
              ||||||||||||||||||||
Sbjct: 153914 gagatggtagaaaggaaaat 153933
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>gb|AF231794.1|AF231794 Pinus taeda clone LC15b2 microsatellite sequence
          Length = 254

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 267 gtcgacatcgttgtcatcgtcatcctca 294
           |||| |||||| ||||||||||||||||
Sbjct: 231 gtcgtcatcgtcgtcatcgtcatcctca 204
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>emb|Z65094.1|HS19B9F H.sapiens CpG island DNA genomic Mse1 fragment, clone 19b9, forward
           read cpg19b9.ft1a
          Length = 264

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 107 gaaaggaaaatcagtcagta 126
           ||||||||||||||||||||
Sbjct: 169 gaaaggaaaatcagtcagta 188
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>emb|AM236324.1| Escherichia coli genome fragment containing the yersiniabactin, cob and
             pdu gene clusters, strain A0 34/86
          Length = 84189

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    cttgtgaatcgtgatgtctg 56
             ||||||||||||||||||||
Sbjct: 54791 cttgtgaatcgtgatgtctg 54810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,222,726
Number of Sequences: 3902068
Number of extensions: 3222726
Number of successful extensions: 63015
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62809
Number of HSP's gapped (non-prelim): 201
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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