ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TAOK3_PONPY (Q5R4F3) Serine/threonine-protein kinase TAO3 (EC 2.... 29 2.3
2TAOK3_HUMAN (Q9H2K8) Serine/threonine-protein kinase TAO3 (EC 2.... 29 2.3
3RAPD_BACSU (P94583) Response regulator aspartate phosphatase D (... 28 4.0
4MYSA_DROME (P05661) Myosin heavy chain, muscle 28 5.2
5FA18_ARATH (Q8LEK2) FAM18-like protein At1g09330 28 6.8

>TAOK3_PONPY (Q5R4F3) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)|
           (Thousand and one amino acid protein 3)
          Length = 898

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 229 EPMELLQAHNITKGALHGFGYIRT--TIRRQLRQGLEL*YQPG 351
           +P++ ++   IT GALHG  Y+ +   I R ++ G  L  +PG
Sbjct: 117 KPLQEVEIAAITHGALHGLAYLHSHALIHRDIKAGNILLTEPG 159



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>TAOK3_HUMAN (Q9H2K8) Serine/threonine-protein kinase TAO3 (EC 2.7.11.1)|
           (Thousand and one amino acid protein 3) (Jun
           kinase-inhibitory kinase) (JNK/SAPK-inhibitory kinase)
           (Dendritic cell-derived protein kinase) (Cutaneous
           T-cell lymphoma tumor antigen H
          Length = 898

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 229 EPMELLQAHNITKGALHGFGYIRT--TIRRQLRQGLEL*YQPG 351
           +P++ ++   IT GALHG  Y+ +   I R ++ G  L  +PG
Sbjct: 117 KPLQEVEIAAITHGALHGLAYLHSHALIHRDIKAGNILLTEPG 159



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>RAPD_BACSU (P94583) Response regulator aspartate phosphatase D (EC 3.1.-.-)|
          Length = 354

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
 Frame = +1

Query: 58  ELQQYKYMFSSLFVIIRVGVL**MTHIKGGIRLFLLVYNEINLKPTLKSQAE*GYFPEPM 237
           EL+ Y Y FS L+ +++      + H K   +    ++N       L  Q    Y+    
Sbjct: 87  ELKYYLYFFSGLYEMVKTAPKHAVHHFKKAEQYLAAIHNTFE-AADLYYQTAGAYYLMKS 145

Query: 238 ELLQAHNITKGA---LHGFGYIRTTIRRQL 318
             L    + K     LH FGYI+  I  +L
Sbjct: 146 PPLSVQYVKKALHIYLHQFGYIKKVITCKL 175



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>MYSA_DROME (P05661) Myosin heavy chain, muscle|
          Length = 1962

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 13  LDCPDERADQFIHCTELQQYKYMFSSLFVIIRVGVL 120
           LDCP + +   I  TEL +  Y      V  R GVL
Sbjct: 734 LDCPKKASKVLIESTELNEDLYRLGHTKVFFRAGVL 769



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>FA18_ARATH (Q8LEK2) FAM18-like protein At1g09330|
          Length = 186

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = -2

Query: 387 WC*WWTHHF*IGSWLIL*LKALTQLSSDGGSYISEAMQCPLGNVVSLEK 241
           W  WWT +    +W IL + +L +  +D    +   +   + N++   K
Sbjct: 106 WLFWWTLYLAAAAWFILGVFSLIRFQADYLLVVGVCLSLNVANIIGFTK 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,808,641
Number of Sequences: 219361
Number of extensions: 1239399
Number of successful extensions: 2470
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2470
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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