ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 31 0.77
2Y1742_STRPN (Q97P99) UPF0348 protein SP1742 28 6.5
3Y1587_STRR6 (Q8DNR1) UPF0348 protein spr1587 28 6.5
4ITPK1_HUMAN (Q13572) Inositol-tetrakisphosphate 1-kinase (EC 2.7... 28 8.5
5ITPK1_MOUSE (Q8BYN3) Inositol-tetrakisphosphate 1-kinase (EC 2.7... 28 8.5
6ITPK1_BOVIN (P0C0T1) Inositol-tetrakisphosphate 1-kinase (EC 2.7... 28 8.5

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 15  NGRMRFHSPARLSFNG*IRVHKWCSRVTNPHTSYITDSSTMN 140
           N R  F  P  LS         WCSR+T+P++++    S +N
Sbjct: 600 NARNSFEDPCSLSVENENYARHWCSRLTDPNSAFSRCHSIIN 641



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>Y1742_STRPN (Q97P99) UPF0348 protein SP1742|
          Length = 365

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 20  PNAVSFPCKTELQWVNQSSQMVFEGNQPPHKL 115
           P+++S+P KT+  W  + + + F GN P H L
Sbjct: 125 PDSLSYPQKTQAMW-KEFAGLDFSGNTPNHVL 155



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>Y1587_STRR6 (Q8DNR1) UPF0348 protein spr1587|
          Length = 365

 Score = 28.1 bits (61), Expect = 6.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 20  PNAVSFPCKTELQWVNQSSQMVFEGNQPPHKL 115
           P+++S+P KT+  W  + + + F GN P H L
Sbjct: 125 PDSLSYPQKTQAMW-KEFAGLDFSGNTPNHVL 155



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>ITPK1_HUMAN (Q13572) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)|
           (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-)
           (Inositol 1,3,4-trisphosphate 5/6-kinase)
          Length = 414

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
 Frame = +2

Query: 23  NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 157
           N ++FP  CKT +     S +M    NQ       PP  + N + H+ +L+K++
Sbjct: 148 NGLTFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVF 201



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>ITPK1_MOUSE (Q8BYN3) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)|
           (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-)
           (Inositol 1,3,4-trisphosphate 5/6-kinase)
          Length = 419

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
 Frame = +2

Query: 23  NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 157
           N ++FP  CKT +     S +M    NQ       PP  + N + H+ +L+K++
Sbjct: 148 NGLAFPFICKTRVAHGTNSHEMAIVFNQEGLNAIQPPCVVQNFINHNAVLYKVF 201



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>ITPK1_BOVIN (P0C0T1) Inositol-tetrakisphosphate 1-kinase (EC 2.7.1.134)|
           (Inositol-triphosphate 5/6-kinase) (EC 2.7.1.-)
           (Inositol 1,3,4-trisphosphate 5/6-kinase)
          Length = 419

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
 Frame = +2

Query: 23  NAVSFP--CKTELQWVNQSSQMVFEGNQ-------PPHKLHNRLKHDELLFKLY 157
           N ++FP  CKT +     S +M    NQ       PP  + N + H+ +L+K++
Sbjct: 148 NGLAFPFICKTRVAHGTNSHEMAIVFNQEGLSAIQPPCVVQNFINHNAVLYKVF 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,349,864
Number of Sequences: 219361
Number of extensions: 280658
Number of successful extensions: 662
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 80,573,946
effective HSP length: 45
effective length of database: 70,702,701
effective search space used: 1696864824
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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