>RNFD_VIBPA (Q87MX1) Electron transport complex protein rnfD|
          Length = 348

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +2

Query: 8   IIFLALIDFIVIVNYIYNVTGSNLFSHSMV 97
           II + LI  IVI  ++Y   G NLF+ +MV
Sbjct: 97  IIVIGLIFAIVIAKHLYGGIGQNLFNPAMV 126

>SYK_BRUSU (P59225) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 551

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 171 RFLSSFGFTFPTSSLTHAYTYGR--PITIECEKRFDPVTLYM 52
           RFL +FGF +  +S T  Y  GR   + ++  +R+D +   M
Sbjct: 143 RFLDTFGFDYEFASATEYYRSGRFDTVLLKAVERYDDIMKVM 184

>SYK_BRUME (Q8YCM8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 551

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 171 RFLSSFGFTFPTSSLTHAYTYGR--PITIECEKRFDPVTLYM 52
           RFL +FGF +  +S T  Y  GR   + ++  +R+D +   M
Sbjct: 143 RFLDTFGFDYEFASATEYYRSGRFDTVLLKAVERYDDIMKVM 184

>PURL_CORGL (Q8NMI5) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 762

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 56  YNVTGSNLFSHSMVMGRPYVYACVRDEVGNVNPKEERNLFIL 181
           YN TG      + V+G   V   V   +GNV P E+ +L++L
Sbjct: 555 YNQTGDEPILPTPVVGVLGVLDNVEQSIGNVLPSEDNDLYLL 596

>SYK_RHILO (Q98BC8) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 548

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -2

Query: 171 RFLSSFGFTFPTSSLTHAYTYGR--PITIECEKRFDPVTLYM 52
           RFL +FGF +  +S T  Y  GR   + +   +R+D +   M
Sbjct: 141 RFLDTFGFDYEFASATQYYKSGRFDAMLLRAAERYDKIMAVM 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,567,125
Number of Sequences: 219361
Number of extensions: 538527
Number of successful extensions: 1153
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)