>ECR_AEDAE (P49880) Ecdysone receptor (Ecdysteroid receptor)|
           (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH)
          Length = 675

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 189 HIPQRYMKQQPHQMGHKKSETTHINDNGNGGGS 287
           H  Q    QQ HQ  H + +  H N +G+GGGS
Sbjct: 624 HGQQLTPNQQQHQQQHSQLQQVHANGSGSGGGS 656

>PITX1_DROME (O18400) Pituitary homeobox 1 homolog (D-PTX1)|
          Length = 509

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = +2

Query: 44  GLFTAGIYTLTSLA*PHDSDASIHPSGQDAAISSLKSES--------DLVNEYASHPHST 199
           G  T+G   L S    HDS +S+  S   +++  + S S        DLV  Y+ HPH T
Sbjct: 102 GSSTSGTEHLHSHHSLHDSSSSVSISPAISSLMPISSLSHLHHSAGQDLVGGYSQHPHHT 161

Query: 200 TV 205
            V
Sbjct: 162 VV 163

>YG2K_YEAST (P53253) Protein YGR089W|
          Length = 936

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 98  SDASIHPSGQDAAISSLKSESDLVNEYASHPHSTT 202
           S+ +IHPS Q+ +   L S S+++N  AS+P   T
Sbjct: 328 SNQTIHPSQQNNSPVPLSSHSNILNPAASYPTDAT 362

>IL6RB_RAT (P40190) Interleukin-6 receptor beta chain precursor (IL-6R-beta)|
           (Interleukin 6 signal transducer) (Membrane glycoprotein
           130) (gp130) (CD130 antigen)
          Length = 918

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 331 GAISSEPLHVVLLAGEPPPLPLSLMCVVSD 242
           G I      + +L+G PP +P +L C+V++
Sbjct: 109 GQIEQNVYGITILSGYPPDIPTNLSCIVNE 138

>KCNN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassium channel|
           protein 3 (SK3) (SKCa3)
          Length = 736

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 25/83 (30%), Positives = 30/83 (36%)
 Frame = +3

Query: 57  PVYTR*PPSPNPTTQMHPSIHQDRTRPFRV*NLNLISSMSMLRIHIPQRYMKQQPHQMGH 236
           P   R PPS N T  +HPS  Q          LNL                    H +GH
Sbjct: 110 PTAFRAPPSSNSTAILHPSSRQGS-------QLNL------------------NDHLLGH 144

Query: 237 KKSETTHINDNGNGGGSPARRTT 305
             S T     +G GGGS  R+ +
Sbjct: 145 SPSSTA---TSGPGGGSRHRQAS 164

>DICH_DROME (Q24533) SOX-domain protein dichaete (Protein fish-hook)|
          Length = 382

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 35  SSHGLFTAGIYTLTSLA*PHDSDASIHPSGQDAAISS 145
           ++H    AG+Y  +S + P  S  +I P+G D ++ S
Sbjct: 336 AAHSANAAGLYPSSSTSSPGSSPGTITPNGMDGSMDS 372

>SCN4A_HUMAN (P35499) Sodium channel protein type 4 alpha subunit (Sodium|
           channel protein type IV alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.4) (Sodium channel
           protein, skeletal muscle alpha-subunit) (SkM1)
          Length = 1836

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +3

Query: 198 QRYMKQQPHQMGHKKSETTHINDNGNGGGSPARRTTCRGSEDIAPG 335
           Q   K + HQ   +K++     + G   G PA    C GS D + G
Sbjct: 470 QMLEKFKKHQEELEKAKAAQALEGGEADGDPAHGKDCNGSLDTSQG 515

>CISY_PIG (P00889) Citrate synthase, mitochondrial precursor (EC 2.3.3.1)|
          Length = 464

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +2

Query: 107 SIHPSGQ-DAAISSLKSESDLVNEYASHPHSTTVHE 211
           ++HP  Q  AAI++L SES+    YA   H T   E
Sbjct: 161 NLHPMSQLSAAITALNSESNFARAYAEGIHRTKYWE 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,620,307
Number of Sequences: 219361
Number of extensions: 1060026
Number of successful extensions: 3064
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3058
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)