ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl45b02 |
|---|---|
| Clone Library Name | barley_pub |
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 112 bits (281), Expect = 2e-25 Identities = 54/97 (55%), Positives = 75/97 (77%), Gaps = 1/97 (1%) Frame = -3 Query: 383 AVNPATLEQIFGLSSLAGAPNLLALEQFDNALSRKVNEVVNEIRRQRCSYLRLRLCRKGD 204 +VN L+++F + S A P+ L+++DN LS+K N+VVNEIRRQR SYLR++LC+KGD Sbjct: 1000 SVNSDILQKLFNVRSAAELPSQYVLQKYDNQLSKKFNDVVNEIRRQRSSYLRIKLCKKGD 1059 Query: 203 PSGD-FFRSLLVEDKAPGGLSYVEFLVHVHRQIQSKM 96 P+G+ F+S +VED+ GG SYV+FLV VHRQIQ K+ Sbjct: 1060 PAGNMLFQSYMVEDRGSGGASYVDFLVSVHRQIQHKL 1096
>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)| Length = 1094 Score = 65.1 bits (157), Expect = 4e-11 Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 2/99 (2%) Frame = -3 Query: 383 AVNPATLEQIFGLSSLAGAPN-LLALEQFDNALSRKVNEVVNEIRRQRCSYLRLRLCRKG 207 +V ++ +F +SS + + L L DN LS+KV +++ +R QR Y++L + ++ Sbjct: 996 SVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQE 1055 Query: 206 DPSGDFFRSLLVEDKA-PGGLSYVEFLVHVHRQIQSKMT 93 D F+ LVEDK+ GG SYV+FL H+H++I+ ++ Sbjct: 1056 DKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS 1094
>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640| Length = 1069 Score = 63.2 bits (152), Expect = 2e-10 Identities = 29/52 (55%), Positives = 39/52 (75%) Frame = -3 Query: 383 AVNPATLEQIFGLSSLAGAPNLLALEQFDNALSRKVNEVVNEIRRQRCSYLR 228 +V+ L+++F +SS A PN L+Q+DN LS+K N+ VNEIRRQRCSYLR Sbjct: 984 SVDSDILQKLFAVSSAAEIPNQFVLQQYDNQLSKKFNDAVNEIRRQRCSYLR 1035
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 45.8 bits (107), Expect = 2e-05 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = -3 Query: 365 LEQIFGLSSLAGAPNLLA-LEQFDNALSRKVNEVVNEIRRQRCSYLRLRLCRKGDPSGDF 189 L Q+ G+ + A P + L + D S ++ ++ +R QR + L + R+ Sbjct: 1002 LSQVLGVQNYASIPQTMTDLPELDTPESARIAAFISWLREQRPFFPVLYVIREESLMKAA 1061 Query: 188 FRSLLVEDKAPGGLSYVEFLVHVHRQI 108 F LVED+ LSY EFL+H+ +Q+ Sbjct: 1062 FLQSLVEDRTESALSYYEFLLHIQQQV 1088
>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)| (Fragment) Length = 1078 Score = 45.8 bits (107), Expect = 2e-05 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = -3 Query: 365 LEQIFGLSSLAGAPNLLA-LEQFDNALSRKVNEVVNEIRRQRCSYLRLRLCRKGDPSGDF 189 L Q+ G+ + A P + L + D S ++ ++ +R QR + L + R P Sbjct: 990 LSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPMKAN 1049 Query: 188 FRSLLVEDKAPGGLSYVEFLVHVHRQI 108 F ++ED+ LSY EFL+H+ +Q+ Sbjct: 1050 FLQNMIEDRTESALSYYEFLLHIQQQV 1076
>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)| Length = 1032 Score = 44.7 bits (104), Expect = 6e-05 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 2/91 (2%) Frame = -3 Query: 374 PATLEQIFGLSSLAGA-PNLLALEQFDNALSRKVNEVVNEIRRQRCSYLRLRLCRKGDPS 198 P ++ IF + S A ++ L + N S+++ ++ I+++R ++L + ++ + Sbjct: 937 PELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQP 996 Query: 197 GDFFRSLLVEDKAP-GGLSYVEFLVHVHRQI 108 FR LVEDK GG SYV+FL VH++I Sbjct: 997 EMVFRQFLVEDKGLYGGSSYVDFLCCVHKEI 1027
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 43.9 bits (102), Expect = 9e-05 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%) Frame = -3 Query: 377 NPATLEQIFGLSSLAGAPNLLALE--QFDNALSRKVNEVVNEIRRQRCSY-LRLRLCRKG 207 +P L+ + G+ SL +L ALE D LS +V +++ +R Q S L ++ R+G Sbjct: 792 SPLLLQDLLGVESLEDIDSLKALELPTLDTVLSVQVRNLLSSLRMQFPSMALHPQIVRQG 851 Query: 206 --DPSGDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQSK 99 G+ F S LVED G Y++FL +H + ++ Sbjct: 852 LDGSEGEIF-STLVEDNTREGFGYLDFLTKIHESLHTQ 888
>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)| Length = 1268 Score = 42.0 bits (97), Expect = 4e-04 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%) Frame = -3 Query: 365 LEQIFGLSSLAGAPNLLA-LEQFDNALSRKVNEVVNEIRRQRCSYLRLRLCRKGDPSGDF 189 +E + G ++ A P + L + D S + + +R R L + + P+ Sbjct: 1180 IEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAE 1239 Query: 188 FRSLLVEDKAPGGLSYVEFLVHVHRQI 108 F L+ED+ SY EFL+HV +QI Sbjct: 1240 FFQHLIEDRTEAAFSYYEFLLHVQQQI 1266
>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100| Length = 1038 Score = 42.0 bits (97), Expect = 4e-04 Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 3/95 (3%) Frame = -3 Query: 380 VNPATLEQIFGLSSLAGAPNLLALEQFDNALSRKVNEVVNEIRRQRCSYLRLR-LCRKGD 204 ++P + + G+ A + EQ +N +S+K+ +V ++R SY + L R+G+ Sbjct: 943 LSPDIAKNLLGVDFAADLSRVTFQEQ-ENGMSKKLMRLVKKLRESDPSYHPMCFLVRQGE 1001 Query: 203 PSGDFFRSL--LVEDKAPGGLSYVEFLVHVHRQIQ 105 + F L L+ED+ G YV++++ +HRQ+Q Sbjct: 1002 QPREGFLLLRNLIEDQMGGSSGYVDWILQLHRQVQ 1036
>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I| Length = 926 Score = 32.0 bits (71), Expect = 0.37 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%) Frame = -3 Query: 374 PATLEQIFGLSSLAGAP-NLLALEQFDNALSRKVNEVVNEIR---RQRCSYLRLRLCR-K 210 P L FG++SLA + DN L+ ++N ++ ++R + L L R Sbjct: 830 PQLLIDAFGVNSLADLKAGRFTMPVIDNPLNVRINAILGKLRSLDKGSTIMPSLYLVRGD 889 Query: 209 GDPS-GDFFRSLLVEDKAPGGLSYVEFLVHVHRQIQ 105 GDP +F S VED++ SY++FL + +++ Sbjct: 890 GDPQLRSWFFSHFVEDRSENSPSYLQFLQTLKEKVR 925
>SODC_PHOLE (P00446) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 173 Score = 31.6 bits (70), Expect = 0.48 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +2 Query: 152 HQVLCPPPTANGRNLQTGRPFGTVSVSSKSISVALFHSRLHSLSWTMH 295 HQ L T +LQTG+P GT+ +S V +F L L+ MH Sbjct: 18 HQALAQDLTVKMTDLQTGKPVGTIELSQNKYGV-VFTPELADLTPGMH 64
>YCF1_ADICA (Q85FG7) Hypothetical 199.0 kDa protein ycf1| Length = 1691 Score = 30.8 bits (68), Expect = 0.83 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%) Frame = +3 Query: 45 GIDNLYQPKYHTNEASGHLALDLPVNMYEEL---HIGKATRCFVLHQQRTEE--ISRRVA 209 G+ NLYQPK + + H L + E+ H+ T CF +T+E +VA Sbjct: 1170 GVSNLYQPKMYEKQTPVHYNLIATKFLSPEIRNNHVNDLTMCFDTETGKTDEEFFDEKVA 1229 Query: 210 LSAQS 224 S ++ Sbjct: 1230 RSIEN 1234
>SYNE1_HUMAN (Q8NF91) Nesprin-1 (Nuclear envelope spectrin repeat protein 1)| (Synaptic nuclear envelope protein 1) (Syne-1) (Myocyte nuclear envelope protein 1) (Myne-1) (Enaptin) Length = 8797 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%) Frame = +3 Query: 93 GHLALDLPVNMYEELHI--GKATRCFVLHQQRTEEISRR-VALSAQSQ-SQVRASLS 251 GHLA + E+LH+ GKA CF L ++ ++ + RR +ALS ++ Q ASLS Sbjct: 1825 GHLAKLGSLGRAEDLHLLQGKAEDCFQLFEEASQVVERRQLALSHLAEFLQSHASLS 1881
>ATG5_NEUCR (Q872C6) Autophagy protein 5| Length = 397 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/72 (30%), Positives = 31/72 (43%) Frame = +2 Query: 155 QVLCPPPTANGRNLQTGRPFGTVSVSSKSISVALFHSRLHSLSWTMHYQIAPMPTDLVHQ 334 Q L PP N R QT + + KS+ ALF S + ++ AP+P + Sbjct: 324 QTLVPPRGPNNRTPQT------LGQALKSLLPALFPSSRDPVLASVILHGAPVPFSAPLE 377 Query: 335 PRMRDQIFAPGW 370 MRD + GW Sbjct: 378 ELMRDASYPDGW 389
>SRFAA_BACSU (P27206) Surfactin synthetase subunit 1| Length = 3588 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -3 Query: 347 LSSLAGAPNLLALEQFDNALSRKVNEVVNE-IRRQRCSYLRLRLCRKGDP 201 +S+LAG L++ + D L V + + E IRR LRLRL G+P Sbjct: 27 ISNLAGIGKLVSADAIDYVL---VEQAIQEFIRRNDAMRLRLRLDENGEP 73
>RARG2_MOUSE (P20787) Retinoic acid receptor gamma-B (RAR-gamma-B)| Length = 447 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = -3 Query: 353 FGLSSLAGAPNLLALEQFDNAL---SRKVNEVVNEIRRQRCSYLRLRLC 216 +G+SS G N + R N ++N++ R RC Y RL+ C Sbjct: 91 YGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKC 139
>RARG1_HUMAN (P13631) Retinoic acid receptor gamma-1 (RAR-gamma-1)| Length = 454 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = -3 Query: 353 FGLSSLAGAPNLLALEQFDNAL---SRKVNEVVNEIRRQRCSYLRLRLC 216 +G+SS G N + R N ++N++ R RC Y RL+ C Sbjct: 102 YGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKC 150
>RARA_FUGRU (Q9W5Z3) Retinoic acid receptor alpha (RAR-alpha)| Length = 447 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R+ N ++N++ R RC Y RL+ C Sbjct: 118 REKNCIINKVTRNRCQYCRLQKC 140
>RARG1_MOUSE (P18911) Retinoic acid receptor gamma-A (RAR-gamma-A)| Length = 458 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = -3 Query: 353 FGLSSLAGAPNLLALEQFDNAL---SRKVNEVVNEIRRQRCSYLRLRLC 216 +G+SS G N + R N ++N++ R RC Y RL+ C Sbjct: 102 YGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKC 150
>RARG2_HUMAN (P22932) Retinoic acid receptor gamma-2 (RAR-gamma-2)| Length = 443 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = -3 Query: 353 FGLSSLAGAPNLLALEQFDNAL---SRKVNEVVNEIRRQRCSYLRLRLC 216 +G+SS G N + R N ++N++ R RC Y RL+ C Sbjct: 91 YGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKC 139
>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)| Length = 939 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -3 Query: 293 ALSRKVNEVVNEIRRQRCSYLRLRL---CRKGDPSGDFFRSLLVEDKAPGGL 147 +LS+++NE E R +R L +L C GDPS + + + A GG+ Sbjct: 583 SLSKELNEKKREERERRKKQLYAKLNEICSDGDPSTKYANLVKIGQGASGGV 634
>RARB_HUMAN (P10826) Retinoic acid receptor beta (RAR-beta) (RAR-epsilon)| (HBV-activated protein) Length = 455 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N V+N++ R RC Y RL+ C Sbjct: 126 RDKNCVINKVTRNRCQYCRLQKC 148
>RARB_COTJA (Q9W6B3) Retinoic acid receptor beta (RAR-beta)| Length = 455 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N V+N++ R RC Y RL+ C Sbjct: 126 RDKNCVINKVTRNRCQYCRLQKC 148
>RARB_CHICK (P22448) Retinoic acid receptor beta (RAR-beta)| Length = 455 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N V+N++ R RC Y RL+ C Sbjct: 126 RDKNCVINKVTRNRCQYCRLQKC 148
>RARB_MOUSE (P22605) Retinoic acid receptor beta (RAR-beta)| Length = 482 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N V+N++ R RC Y RL+ C Sbjct: 153 RDKNCVINKVTRNRCQYCRLQKC 175
>RARB_NOTVI (P18515) Retinoic acid receptor beta (RAR-beta) (Fragment)| Length = 158 Score = 28.5 bits (62), Expect = 4.1 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N V+N++ R RC Y RL+ C Sbjct: 72 RDKNCVINKVTRNRCQYCRLQRC 94
>V70K_TYMVA (P20131) 69 kDa protein| Length = 628 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +2 Query: 179 ANGRNLQTGRPFGTVSVSSKSISVALFHSRLHSLSWT----MHYQIAPMPTDLVHQPRM 343 +NG + GRP S S S S + HSR SL T +H + PT L+ P + Sbjct: 2 SNGLPISIGRPCTHDSQRSLSASDSRIHSRFDSLLDTDLPMVHSEGTSAPTQLLRHPNI 60
>RARA_XENLA (P51126) Retinoic acid receptor alpha (RAR-alpha)| Length = 458 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N ++N++ R RC Y RL+ C Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKC 148
>Y1076_METJA (Q58476) Hypothetical ATP-binding protein MJ1076| Length = 337 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 232 K*EHLCRLISFTTSFTFLDNALSNCS 309 K EHLC +I T+ F+DN N S Sbjct: 163 KMEHLCHVICLTSDTLFIDNVYRNSS 188
>RARA_MOUSE (P11416) Retinoic acid receptor alpha (RAR-alpha)| Length = 462 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N ++N++ R RC Y RL+ C Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKC 148
>RARA_HUMAN (P10276) Retinoic acid receptor alpha (RAR-alpha)| Length = 462 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N ++N++ R RC Y RL+ C Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKC 148
>RARA_CHICK (Q90966) Retinoic acid receptor alpha (RAR-alpha)| Length = 460 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N ++N++ R RC Y RL+ C Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKC 148
>RARA_CANFA (Q5FBR4) Retinoic acid receptor alpha (RAR-alpha)| Length = 462 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -3 Query: 284 RKVNEVVNEIRRQRCSYLRLRLC 216 R N ++N++ R RC Y RL+ C Sbjct: 126 RDKNCIINKVTRNRCQYCRLQKC 148
>MA2B2_MOUSE (O54782) Epididymis-specific alpha-mannosidase precursor (EC| 3.2.1.24) (Mannosidase alpha class 2B member 2) Length = 1018 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = +2 Query: 206 RPFGTVSVSSKSISVALFHSRLHSLSWTMHYQIAPMPTDLVH 331 RP G S + + V L ++L+W + Y + T +VH Sbjct: 787 RPHGVSSQGNGQVEVMLHRRLWNNLAWDLKYNLTLNDTSIVH 828
>DLTA_STAXY (Q9X2N4) D-alanine--poly(phosphoribitol) ligase subunit 1 (EC| 6.1.1.13) (D-alanine-activating enzyme) (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) Length = 487 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = +3 Query: 33 YPHAGIDNLYQPKYHTNEASGHLALDLPVNMYEELHIGKATRCFVLHQQRTEEI 194 +P A I N Y P T + L + +N Y L +GKA L EE+ Sbjct: 277 FPSAYIYNTYGPTEATVAVTSILITEAVINQYNPLPVGKARPGTQLSLAENEEL 330
>PIFA_ECOLI (P96329) Phage T7 exclusion protein| Length = 741 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = +3 Query: 75 HTNEASGHLALDLPVNMYEELHIGKATRCFVLHQQRTEEISRRVALSAQSQSQVRASLSP 254 HT+E S ++ P E+ I + R + H Q +E +R + L + + SP Sbjct: 531 HTDEVSTRFSIRNPWFSLREMAINEVVRHLLKHMQDIDE-TRTITL---MEKLIVTGASP 586 Query: 255 YFIHDFI 275 ++I DF+ Sbjct: 587 FWIADFM 593
>KTNB1_CHICK (Q5ZIU8) Katanin p80 WD40-containing subunit B1 (Katanin p80| subunit B1) (p80 katanin) Length = 657 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 143 RKGHQVLCPPPTANGRNLQTGRPFGTVSVSSKSISVAL 256 RKGH+ +C T+ +NL T R + S S+ A+ Sbjct: 494 RKGHKTVCMVLTSRHKNLDTVRAVWSTSDMKNSVDAAV 531
>MYCLA_XENLA (Q05404) L-myc A protein (L-myc 1 protein)| Length = 344 Score = 27.3 bits (59), Expect = 9.1 Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 1/70 (1%) Frame = +2 Query: 176 TANGRNLQTGRPFGTVSVSSKSISVALFHSRLHSLSWTMHYQIAPMPTDLVHQPRMRDQI 355 T R GR T++V + + LFH +H ++ P P + QP I Sbjct: 166 TIEKRKSYGGRQPVTITVRADPTATKLFHISIHQQQHNYAARLPPEPNSMSPQPNFHSPI 225 Query: 356 -FAPGWPGSP 382 PG SP Sbjct: 226 KEEPGEVTSP 235
>LON_MYCPN (P78025) ATP-dependent protease La (EC 3.4.21.53)| Length = 795 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/30 (46%), Positives = 22/30 (73%) Frame = -3 Query: 308 EQFDNALSRKVNEVVNEIRRQRCSYLRLRL 219 ++ DN ++RKVNE ++ R+QR YLR +L Sbjct: 230 DKIDNRITRKVNEQLS--RQQRDFYLREKL 257
>DHSL_CAUCR (Q9AB72) Deoxyhypusine synthase-like protein (EC 2.5.-.-)| Length = 367 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/44 (29%), Positives = 21/44 (47%) Frame = -3 Query: 299 DNALSRKVNEVVNEIRRQRCSYLRLRLCRKGDPSGDFFRSLLVE 168 DN + R + ++E Q C + L +C K +P G R + E Sbjct: 143 DNYIDRIYDTYIDEEELQACDHTILEICNKLEPRGYSSREFIWE 186
>RS16_LEPIN (Q8F3L1) 30S ribosomal protein S16| Length = 88 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -3 Query: 233 LRLRLCRKGDPSGDFFRSLLVEDKAPGGLSYVEFLVHVH-RQIQSKMT*SFIGVIFWL 63 ++LRL R G +R + + ++P +V+ + H H QI+ + T + ++ WL Sbjct: 2 VKLRLQRTGTKHDPHYRIVAADSRSPRDGKFVDIVGHYHPAQIKEQTTFNKEKILTWL 59
>RS16_LEPIC (P62232) 30S ribosomal protein S16| Length = 88 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -3 Query: 233 LRLRLCRKGDPSGDFFRSLLVEDKAPGGLSYVEFLVHVH-RQIQSKMT*SFIGVIFWL 63 ++LRL R G +R + + ++P +V+ + H H QI+ + T + ++ WL Sbjct: 2 VKLRLQRTGTKHDPHYRIVAADSRSPRDGKFVDIVGHYHPAQIKEQTTFNKEKILTWL 59
>HAM1_WIGBR (Q8D3C3) HAM1 protein homolog| Length = 199 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 Query: 277 TFLDNALSNCSNANRFGAPA 336 TFL+NAL NA+++G PA Sbjct: 45 TFLENALIKARNASKYGFPA 64
>BRO1_NEUCR (Q7SAN9) Vacuolar protein-sorting protein bro-1 (BRO| domain-containing protein 1) Length = 1012 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = +3 Query: 138 HIGKATRCFVLHQQRTEEISRRVALSAQSQSQVRASLSPYFIHDFIHFP 284 +I C HQ RTEE + +A Q A + Y +F+H P Sbjct: 117 NISAVLSCHAAHQLRTEEAGLK---TAYHSFQASAGMFTYINENFLHAP 162
>CP2CR_MESAU (P33264) Cytochrome P450 2C27 (EC 1.14.14.1) (CYPIIC27) (P450 HSM3)| Length = 490 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 352 LVSHPWLVHQICWHWSNLIMHCPG 281 ++S PWL Q+C ++ +LI +CPG Sbjct: 207 ILSSPWL--QVCNNFPSLIDYCPG 228
>CP2CP_MESAU (Q08078) Cytochrome P450 2C25 (EC 1.14.14.1) (CYPIIC25) (P450 HSM1)| Length = 490 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 352 LVSHPWLVHQICWHWSNLIMHCPG 281 ++S PWL Q+C ++ +LI +CPG Sbjct: 207 ILSSPWL--QVCNNFPSLIDYCPG 228
>K0323_MOUSE (Q80U38) Protein KIAA0323| Length = 671 Score = 27.3 bits (59), Expect = 9.1 Identities = 21/61 (34%), Positives = 29/61 (47%) Frame = +3 Query: 90 SGHLALDLPVNMYEELHIGKATRCFVLHQQRTEEISRRVALSAQSQSQVRASLSPYFIHD 269 S HL LP + L I T FV+ Q R EE+ +R++ Q QS A + + D Sbjct: 108 SAHLVPLLPGS----LMISGLTEAFVMAQSRVEELVQRLSWDLQLQSCPGAPDNGGVLRD 163 Query: 270 F 272 F Sbjct: 164 F 164 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,610,670 Number of Sequences: 219361 Number of extensions: 1418724 Number of successful extensions: 4229 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4227 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
