ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl45a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chr... 48 0.016
2emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch... 48 0.016
3gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, comp... 48 0.016
4gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, comp... 48 0.016
5emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chr... 46 0.063
6gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome... 42 0.98
7gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 42 0.98
8gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome... 42 0.98
9gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complet... 42 0.98
10gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, comple... 42 0.98
11gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds 40 3.9
12emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chr... 40 3.9
13emb|AL589733.20| Human DNA sequence from clone RP11-164L23 on ch... 40 3.9
14emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on ch... 40 3.9
15emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chr... 40 3.9
16emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chro... 40 3.9
17emb|AL136166.6| Human DNA sequence from clone RP11-36B23 on chro... 40 3.9
18emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G... 40 3.9
19emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P1... 40 3.9
20emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 ... 40 3.9
21emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 40 3.9
22gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 3.9
23emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B... 40 3.9
24gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Canc... 40 3.9
25gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 3.9
26gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, com... 40 3.9
27emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in... 40 3.9
28gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, p... 40 3.9
29dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 3.9
30gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complet... 40 3.9
31gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5,... 40 3.9
32gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, compl... 40 3.9
33gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clon... 40 3.9
34emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMW... 40 3.9
35dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 3.9
36dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 3.9
37dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 3.9
38emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from... 40 3.9
39emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4... 40 3.9
40gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Can... 40 3.9
41emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chr... 40 3.9
42dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 3.9
43dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, compl... 40 3.9
44dbj|AB011399.1| Homo sapiens gene for AF-6, complete cds 40 3.9

>emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 115551

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 88    tcaaaactcaactgtatttctata 111
             ||||||||||||||||||||||||
Sbjct: 81214 tcaaaactcaactgtatttctata 81237



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>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the
             5' end of a novel gene (CGI-67), a novel gene, a novel
             gene (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||||||||||||||||||||||
Sbjct: 99133 caaaactcaactgtatttctatac 99110



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>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence
          Length = 209754

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||||||||||||||||||||||
Sbjct: 72435 caaaactcaactgtatttctatac 72412



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>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence
          Length = 199004

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 89     caaaactcaactgtatttctatac 112
              ||||||||||||||||||||||||
Sbjct: 126557 caaaactcaactgtatttctatac 126580



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>emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chromosome 1 Contains the 5'
              end of the XPR1 gene for xenotropic and polytropic
              retrovirus receptor, complete sequence
          Length = 178375

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 89     caaaactcaactgtatttctata 111
              |||||||||||||||||||||||
Sbjct: 153626 caaaactcaactgtatttctata 153604



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>gb|AC155276.3| Mus musculus BAC clone RP23-26E18 from chromosome 8, complete sequence
          Length = 234359

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 116   agaactatatctgccctgcccaatt 140
             |||||||||||||||||||| ||||
Sbjct: 86941 agaactatatctgccctgccaaatt 86917



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>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 88    tcaaaactcaactgtatttctatac 112
             ||||||||||| |||||||||||||
Sbjct: 35876 tcaaaactcaattgtatttctatac 35852



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>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence
          Length = 207128

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 116    agaactatatctgccctgcccaatt 140
              |||||||||||||||||||| ||||
Sbjct: 192219 agaactatatctgccctgccaaatt 192195



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>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence
          Length = 138778

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 88    tcaaaactcaactgtatttctatac 112
             |||||| ||||||||||||||||||
Sbjct: 14323 tcaaaaatcaactgtatttctatac 14347



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>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence
          Length = 202029

 Score = 42.1 bits (21), Expect = 0.98
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 89     caaaactcaactgtatttctatactgtag 117
              ||||| |||||||||||||||||| ||||
Sbjct: 131285 caaaaatcaactgtatttctatacagtag 131313



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>gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds
          Length = 3102

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   caaaactcaactgtatttctatac 112
            ||||| ||||||||||||||||||
Sbjct: 1838 caaaaatcaactgtatttctatac 1861



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>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete
             sequence
          Length = 129844

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 222   tgtgcagaggccctgtcatg 241
             ||||||||||||||||||||
Sbjct: 81163 tgtgcagaggccctgtcatg 81182



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>emb|AL589733.20| Human DNA sequence from clone RP11-164L23 on chromosome 6 Contains
            the 5' end of a novel gene, the gene for HGC6.1.1
            protein, the KNSL3 gene for kinesin-like 3, the gene for
            a novel protein and 5 CpG islands, complete sequence
          Length = 201088

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  tgtatttctatactgtagaa 119
            ||||||||||||||||||||
Sbjct: 6990 tgtatttctatactgtagaa 7009



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>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3
             histone, family 3B (H3F3B) pseudogene, the BMP15 gene for
             bone morphogenetic protein 15, and a high-mobility group
             box 1 (HMGB1) pseudogene, complete sequence
          Length = 125495

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||||||||||| ||||||||||
Sbjct: 74522 caaaactcaactgaatttctatac 74545



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>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two
             CpG islands, complete sequence
          Length = 123887

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    tcaaaactcaactgtatttctata 111
             |||||| |||||||||||||||||
Sbjct: 50834 tcaaaagtcaactgtatttctata 50811



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>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel
              gene, the 5' end of the CHAC gene for chorea acanthocytosis
              and a CpG island, complete sequence
          Length = 110633

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 89     caaaactcaactgtatttctatac 112
              |||||||||| |||||||||||||
Sbjct: 109107 caaaactcaattgtatttctatac 109084



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>emb|AL136166.6| Human DNA sequence from clone RP11-36B23 on chromosome X Contains part
             of a novel gene, complete sequence
          Length = 102105

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 90    aaaactcaactgtatttctatactgtag 117
             |||| |||||||||||||||||| ||||
Sbjct: 46909 aaaagtcaactgtatttctatacagtag 46882



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>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3
             Contains the gene for NTF2-related export protein (NXT1),
             the ZNF336 gene for zinc finger protein 336, two putative
             novel genes, the NAPB gene for N-ethylmaleimide-sensitive
             factor attachment protein beta, the CSTL1 gene for
             cystatin-like 1, the CST11 gene for cystatin 11 and six
             CpG islands, complete sequence
          Length = 112180

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||| ||||||||||||||||||
Sbjct: 42775 caaaattcaactgtatttctatac 42798



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>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1
             Contains a zinc finger protein 208 (ZNF208) pseudogene,
             complete sequence
          Length = 103367

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             |||||||||| |||||||||||||
Sbjct: 67212 caaaactcaattgtatttctatac 67235



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>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains
             the MAFB gene for v-maf musculoaponeurotic fibrosarcoma
             oncogene homolog B (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 145593

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||| ||||||||||||||||||
Sbjct: 13232 caaaaatcaactgtatttctatac 13255



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>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    tcaaaactcaactgtatttctata 111
             |||||| |||||||||||||||||
Sbjct: 20058 tcaaaaatcaactgtatttctata 20081



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>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||| ||||||||||||||||||
Sbjct: 56889 caaaaatcaactgtatttctatac 56866



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>emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B18 on chromosome Xq22.2-23
            Contains part of a novel gene for a protein similar to
            nuclear cap binding protein and the 5' end of the MID1
            gene for midline 1 (Opitz/BBB syndrome) protein, complete
            sequence
          Length = 94081

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   caaaactcaactgtatttctatac 112
            ||||| ||||||||||||||||||
Sbjct: 9071 caaaaatcaactgtatttctatac 9094



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>gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 20925

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   caaaaaattcttcctcaaaa 93
            ||||||||||||||||||||
Sbjct: 8262 caaaaaattcttcctcaaaa 8243



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>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 89   caaaactcaactgtatttctatac 112
            ||||| ||||||||||||||||||
Sbjct: 5161 caaaaatcaactgtatttctatac 5184



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>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence
          Length = 175967

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||| ||||||||||||||||||
Sbjct: 65642 caaaaatcaactgtatttctatac 65619



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>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1,
             complete sequence
          Length = 188290

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    aaaaaattcttcctcaaaac 94
             ||||||||||||||||||||
Sbjct: 61397 aaaaaattcttcctcaaaac 61416



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>gb|AF137160.1| Ostracion sp. IMCB-2002 dystrophin (Dyst) gene, partial cds
          Length = 378

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 4  acatacatcaggtcgacaca 23
          ||||||||||||||||||||
Sbjct: 82 acatacatcaggtcgacaca 63



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>dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810431G11 product:glutathione
           S-transferase, alpha 4, full insert sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 69  tgtgtcaaaaaattcttcctcaaa 92
           |||||||| |||||||||||||||
Sbjct: 205 tgtgtcaagaaattcttcctcaaa 182



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>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence
          Length = 131085

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    aaaactcaactgtatttcta 109
             ||||||||||||||||||||
Sbjct: 85055 aaaactcaactgtatttcta 85036



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>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||| ||||||||||||||||||
Sbjct: 40483 caaaaatcaactgtatttctatac 40506



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>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    caaaactcaactgtatttctatac 112
             ||||| ||||||||||||||||||
Sbjct: 55239 caaaaatcaactgtatttctatac 55216



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>gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clone B845I12, complete sequence
          Length = 178237

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aaaaaattcttcctcaaaac 94
              ||||||||||||||||||||
Sbjct: 139920 aaaaaattcttcctcaaaac 139939



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>emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMWG0704
          Length = 521

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  ttacgatgacacatcaccag 51
           ||||||||||||||||||||
Sbjct: 347 ttacgatgacacatcaccag 328



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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aaaaaattcttcctcaaaac 94
              ||||||||||||||||||||
Sbjct: 276715 aaaaaattcttcctcaaaac 276734



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>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete
              sequence
          Length = 152472

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 89     caaaactcaactgtatttctatac 112
              ||||| ||||||||||||||||||
Sbjct: 113042 caaaaatcaactgtatttctatac 113065



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>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7
          Length = 150708

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    attcttcctcaaaactcaactgta 103
             |||||||| |||||||||||||||
Sbjct: 90541 attcttccacaaaactcaactgta 90518



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>emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from PAC RP4-646P19 map 21q21
            region D21S189-LA297, complete sequence
          Length = 121360

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   aaaaaattcttcctcaaaac 94
            ||||||||||||||||||||
Sbjct: 1095 aaaaaattcttcctcaaaac 1076



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>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE
          Length = 136545

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aaaaattcttcctcaaaactcaac 99
             |||||||||||||| |||||||||
Sbjct: 58235 aaaaattcttcctctaaactcaac 58212



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>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 154271

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ctgtatttctatactgtaga 118
              ||||||||||||||||||||
Sbjct: 103915 ctgtatttctatactgtaga 103934



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>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
             sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aattcttcctcaaaactcaa 98
             ||||||||||||||||||||
Sbjct: 23072 aattcttcctcaaaactcaa 23053



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>dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1967D12, complete
            sequence
          Length = 160952

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 80   attcttcctcaaaactcaactgta 103
            |||||||| |||||||||||||||
Sbjct: 8941 attcttccacaaaactcaactgta 8918



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>dbj|AB016897.1| Homo sapiens genomic DNA, chromosome 6q27, complete sequence
          Length = 331211

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tgtatttctatactgtagaa 119
              ||||||||||||||||||||
Sbjct: 288518 tgtatttctatactgtagaa 288537



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>dbj|AB011399.1| Homo sapiens gene for AF-6, complete cds
          Length = 163974

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    tgtatttctatactgtagaa 119
              ||||||||||||||||||||
Sbjct: 158089 tgtatttctatactgtagaa 158108


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,706,861
Number of Sequences: 3902068
Number of extensions: 2706861
Number of successful extensions: 53361
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53302
Number of HSP's gapped (non-prelim): 59
length of query: 296
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 274
effective length of database: 17,147,199,772
effective search space: 4698332737528
effective search space used: 4698332737528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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