>gb|AC131121.4| Mus musculus BAC clone RP24-550I15 from 1, complete sequence
          Length = 127312

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   actaaatacaaggctctgaag 222
             |||||||||||||||||||||
Sbjct: 36516 actaaatacaaggctctgaag 36536

>emb|AL671011.9| Mouse DNA sequence from clone RP23-95O23 on chromosome 4, complete
              sequence
          Length = 226950

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 327    gagggcaggagattcacccag 347
              |||||||||||||||||||||
Sbjct: 138411 gagggcaggagattcacccag 138391

>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    aaagctttccgaagcaaccc 253
              ||||||||||||||||||||
Sbjct: 904388 aaagctttccgaagcaaccc 904369

>gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, complete sequence
          Length = 188997

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   agccatgggttgatgacccc 387
             ||||||||||||||||||||
Sbjct: 86929 agccatgggttgatgacccc 86910

>gb|U50072.1| Caenorhabditis elegans cosmid K06B9, complete sequence
          Length = 31737

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tcttatgattggtacaacaa 68
             ||||||||||||||||||||
Sbjct: 11337 tcttatgattggtacaacaa 11356

>emb|AL358858.19| Human DNA sequence from clone RP11-239I22 on chromosome 1 Contains part
             of the USH2A gene for Usher syndrome 2A (autosomal
             recessive, mild), complete sequence
          Length = 93856

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 41    atatttactcttatgattggtacaacaa 68
             |||||| ||||| |||||||||||||||
Sbjct: 90674 atattttctcttttgattggtacaacaa 90701

>emb|AL133549.11| Human DNA sequence from clone RP11-32F11 on chromosome 9p24.1-24.3
             Contains the 3'end of the RFX3 gene for regulatory factor
             X 3 (influences HLA class II expression), a novel gene and
             a CpG island, complete sequence
          Length = 162237

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    gaatctcaatatttactctt 52
             ||||||||||||||||||||
Sbjct: 24628 gaatctcaatatttactctt 24609

>ref|XM_795237.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC585316 (LOC585316), mRNA
          Length = 3270

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 367  aagccatgggttgatgaccc 386
            ||||||||||||||||||||
Sbjct: 1673 aagccatgggttgatgaccc 1654

>ref|XM_688640.1| PREDICTED: Danio rerio similar to CG7818-PA (LOC573446), mRNA
          Length = 1685

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cagtaaagatgaacaaaaag 282
           ||||||||||||||||||||
Sbjct: 195 cagtaaagatgaacaaaaag 214

>ref|XM_625634.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_260),
            partial mRNA
          Length = 4080

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 17   atatttggaaaaacacgaatctcaatat 44
            ||||||| |||||||||||| |||||||
Sbjct: 2112 atatttgaaaaaacacgaatgtcaatat 2139

>ref|NM_068111.1| Caenorhabditis elegans CYtochrome P450 family member (cyp-25A6)
           (cyp-25A6) mRNA, complete cds
          Length = 753

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 49  tcttatgattggtacaacaa 68
           ||||||||||||||||||||
Sbjct: 187 tcttatgattggtacaacaa 206

>emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in linkage group 1,
              complete sequence
          Length = 194023

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    cagtaaagatgaacaaaaag 282
              ||||||||||||||||||||
Sbjct: 183889 cagtaaagatgaacaaaaag 183870

>emb|BX005024.13| Zebrafish DNA sequence from clone DKEY-211F1, complete sequence
          Length = 171527

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   cagtaaagatgaacaaaaag 282
             ||||||||||||||||||||
Sbjct: 14429 cagtaaagatgaacaaaaag 14448

>ref|NM_207071.1| Danio rerio zgc:77296 (zgc:77296), mRNA
          Length = 1730

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cagtaaagatgaacaaaaag 282
           ||||||||||||||||||||
Sbjct: 200 cagtaaagatgaacaaaaag 219

>gb|BC066377.1| Danio rerio zgc:77296, mRNA (cDNA clone MGC:77296 IMAGE:6965715),
           complete cds
          Length = 1730

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 263 cagtaaagatgaacaaaaag 282
           ||||||||||||||||||||
Sbjct: 200 cagtaaagatgaacaaaaag 219

>emb|Z66495.2|CEC36A4 Caenorhabditis elegans Cosmid C36A4, complete sequence
          Length = 40146

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tcttatgattggtacaacaa 68
             ||||||||||||||||||||
Sbjct: 10654 tcttatgattggtacaacaa 10635

>emb|AL355840.2|CNS05TCV Human chromosome 14 DNA sequence BAC R-382E15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 179937

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    aatatttactcttatgattg 59
             ||||||||||||||||||||
Sbjct: 38724 aatatttactcttatgattg 38705

>emb|AL359236.4|CNS05TEN Human chromosome 14 DNA sequence BAC R-960H4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181833

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     aatatttactcttatgattg 59
              ||||||||||||||||||||
Sbjct: 177718 aatatttactcttatgattg 177699

>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence
          Length = 170723

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   acactatacgttataacaca 144
             ||||||||||||||||||||
Sbjct: 88634 acactatacgttataacaca 88615

>emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 in linkage group 1,
              complete sequence
          Length = 211668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    cagtaaagatgaacaaaaag 282
              ||||||||||||||||||||
Sbjct: 204848 cagtaaagatgaacaaaaag 204829

>emb|AL606742.11| Mouse DNA sequence from clone RP23-70A7 on chromosome 3, complete
             sequence
          Length = 186559

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   acactatacgttataacaca 144
             ||||||||||||||||||||
Sbjct: 15524 acactatacgttataacaca 15543


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,292,965
Number of Sequences: 3902068
Number of extensions: 3292965
Number of successful extensions: 61147
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61110
Number of HSP's gapped (non-prelim): 37
length of query: 395
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 373
effective length of database: 17,147,199,772
effective search space: 6395905514956
effective search space used: 6395905514956
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)