Clone Name | rbastl45a09 |
---|---|
Clone Library Name | barley_pub |
>COPA_BOVIN (Q27954) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 51.2 bits (121), Expect = 6e-07 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -1 Query: 324 VCGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICELSVVGADASGLLCSPTQSR 154 +C A++ PIYRG+ CP + + P +GQ+C + ++ +G D GL SP Q R Sbjct: 1168 ICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICKVTTVTEIGKDVIGLRISPLQFR 1224
>COPA_HUMAN (P53621) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| (HEPCOP) (HEP-COP) [Contains: Xenin (Xenopsin-related peptide); Proxenin] Length = 1224 Score = 50.8 bits (120), Expect = 8e-07 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = -1 Query: 324 VCGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICELSVVGADASGLLCSPTQSR 154 +C A++ PIYRG+ CP + + P +GQ+C + ++ +G D GL SP Q R Sbjct: 1168 ICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR 1224
>COPA_YEAST (P53622) Coatomer subunit alpha (Alpha-coat protein) (Alpha-COP)| Length = 1201 Score = 39.7 bits (91), Expect = 0.002 Identities = 19/49 (38%), Positives = 29/49 (59%) Frame = -1 Query: 324 VCGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICELSVVGADASGL 178 +C AT+ PIY VS P S++V + + ++ I +S +GA ASGL Sbjct: 1149 ICAATYKPIYEDTPSVSDPLTGSKYVITEKDKIDRIAMISKIGAPASGL 1197
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 33.5 bits (75), Expect = 0.14 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%) Frame = -2 Query: 293 AGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGR--------TPQASSAPLHNRDKISGD 138 AGR P P + GSCP +R+ A +R GR TP+A ++P R G+ Sbjct: 522 AGRCLLPRPKSLAGSCPSTRLLTLEEAQARTQGRLGTPTEPTTPKAPASPAERRKGERGE 581
>SYFM_DROME (O16129) Probable phenylalanyl-tRNA synthetase, mitochondrial| precursor (EC 6.1.1.20) (Phenylalanine--tRNA ligase) (PheRS) Length = 453 Score = 33.1 bits (74), Expect = 0.18 Identities = 17/43 (39%), Positives = 23/43 (53%) Frame = -2 Query: 302 RSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASS 174 +ST +S AP P S PQ VS + YA+ W+ TP+ S Sbjct: 15 KSTRCLASSAAPAKSPSSPPQLEVSGSTYATDGWTNVTPKILS 57
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 31.6 bits (70), Expect = 0.52 Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 12/61 (19%) Frame = -2 Query: 314 QPLSRSTAGRRTSPA------PTARPGSCP------QSRVSCAAYASSRWSGRTPQASSA 171 QP +RSTA + PA PT PG P + S A + GR PQA SA Sbjct: 3817 QPTTRSTAPAASHPAGKPQPGPTTAPGPQPAGLPRAEQAGSSKPAAKAPQQGRAPQAQSA 3876 Query: 170 P 168 P Sbjct: 3877 P 3877
>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130| (Serine-arginine-rich splicing regulatory protein 130) (SRrp130) (SR-rich protein) (SR-related protein) Length = 805 Score = 31.2 bits (69), Expect = 0.68 Identities = 20/49 (40%), Positives = 27/49 (55%) Frame = -2 Query: 314 QPLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSAP 168 Q SRS + SP+ +R S S VS ++Y+SS S RT SS+P Sbjct: 505 QGRSRSGSSSSGSPSSNSRTSST-SSTVSSSSYSSSSGSSRTSSRSSSP 552
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -2 Query: 317 GQPLSRSTAGRRTSPAPTARPGSC-PQSRVSCAAYASSR 204 G P + AGR P P PG C P + + +AYAS+R Sbjct: 641 GSPGAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASAR 679
>CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 985 Score = 30.4 bits (67), Expect = 1.2 Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTAR-PGSCPQSRVSCAAYASSRWSGRTPQASSAPL 165 S+A + SR+T R+T PAP ++ P P A +SR S + A PL Sbjct: 4 SAARRASSRATPARKTPPAPASQTPAPSPGGTAGTALGPTSRRSSGSAAAKDQPL 58
>SEM4D_MOUSE (O09126) Semaphorin-4D precursor (Semaphorin J) (Sema J)| (Semaphorin C-like 2) (M-Sema G) Length = 861 Score = 30.0 bits (66), Expect = 1.5 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 287 RRTSPAPTARPGSCPQSRVSCAAYASS 207 R P PT RPG+C S A Y SS Sbjct: 357 RYNGPVPTPRPGACIDSEARAANYTSS 383
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -2 Query: 320 AGQPLSRSTAGRRTSPAPTARPG 252 AG+P R G R SP PT RPG Sbjct: 595 AGEPGPRGLLGPRGSPGPTGRPG 617
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSA 171 SSA S+A +SP+ +A S P S S ++ SS S + +SSA Sbjct: 480 SSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSA 531 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSA 171 SS+ S S++ +SP+ +A S P S S ++ SS S + +SSA Sbjct: 470 SSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSA 521
>ACH10_CHICK (Q9I8C7) Neuronal acetylcholine receptor protein, alpha-10 subunit| precursor (Nicotinic acetylcholine receptor subunit alpha 10) (NACHR alpha 10) (Alpha 10 nAChR) Length = 452 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -2 Query: 323 SAGQPLSRSTAGR--RTSPAPTARPGSCPQSRVSCAAYA 213 S G+P T G R P PG CP+SR C +A Sbjct: 358 SCGRPQREGTGGMGPRDPPGEGVEPGLCPRSRCLCHHHA 396
>CHD9_HUMAN (Q3L8U1) Chromodomain-helicase-DNA-binding protein 9 (EC 3.6.1.-)| (ATP-dependent helicase CHD9) (CHD-9) (Chromatin-related mesenchymal modulator) (CReMM) (Chromatin remodeling factor CHROM1) (Peroxisomal proliferator-activated receptor A-inter Length = 2897 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/58 (27%), Positives = 31/58 (53%) Frame = -2 Query: 305 SRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSAPLHNRDKISGDDD 132 SRS++ +S +R GS S SC++ +SS S + +SS+ + + S +++ Sbjct: 2145 SRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSSSEESDSDEEE 2202
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 29.3 bits (64), Expect = 2.6 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -2 Query: 317 GQPLSRSTAGRRTSPAPTARPGSC-PQSRVSCAAYASSR 204 G P + AGR P P PG C P + + +AY S+R Sbjct: 640 GSPGAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSAR 678
>ZN710_MOUSE (Q3U288) Zinc finger protein 710| Length = 666 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 16/75 (21%) Frame = -1 Query: 324 VCGATFVPIYR---------GQKDVSCPYCASRFVPSVEGQLC-------SICELSVVGA 193 VCG +F +Y G K CPYC+S+F +++G L + ++S+ Sbjct: 553 VCGKSFNRMYNLLGHMHLHAGSKPFKCPYCSSKF--NLKGNLSRHMKVKHGVMDISLDSQ 610 Query: 192 DASGLLCSPTQSR*D 148 D L P S D Sbjct: 611 DPMMELAGPDPSELD 625
>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1305 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Frame = -2 Query: 293 AGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGR--------TPQASSAPLHNRDK 150 AGR P P + GS P +R+ A +R GR TP+ ++P+ R + Sbjct: 546 AGRCLLPRPKSLAGSSPSTRLLTLEEAQARTQGRLGTPTEPTTPKTPASPVERRKR 601
>NMDE3_RAT (Q00961) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1237 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 5/50 (10%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTARPGSC-----PQSRVSCAAYASSRWSGR 192 S G P T R +P P ARP +C SR SC + +RW R Sbjct: 951 SGWGPPGGGRTPLARRAPQPPARPATCGPPLPDVSRPSCRHASDARWPVR 1000
>Y215_ADE02 (P03291) Hypothetical protein F-215| Length = 215 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTAR-PGSCPQSRVSCAAYASSR 204 S G RSTA SPA +AR SCP++ +C S R Sbjct: 95 SRRGARFRRSTAASSRSPATSARSTSSCPRAAPTCPCPLSRR 136
>ZN710_HUMAN (Q8N1W2) Zinc finger protein 710| Length = 664 Score = 28.5 bits (62), Expect = 4.4 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 9/34 (26%) Frame = -1 Query: 324 VCGATFVPIYR---------GQKDVSCPYCASRF 250 VCG +F +Y G K CPYC+S+F Sbjct: 551 VCGKSFNRMYNLLGHMHLHAGSKPFKCPYCSSKF 584
>PI2R_MOUSE (P43252) Prostacyclin receptor (Prostanoid IP receptor) (PGI| receptor) (Prostaglandin I2 receptor) Length = 415 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -2 Query: 311 PLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSAPLHNRDKIS 144 PLSR +GRR PAPT+ Q++ SS +G+ ++ PL D S Sbjct: 349 PLSRPASGRRDPPAPTSL-----QAKEGSWVPLSSWGTGQVAPLTAVPLTGGDGCS 399
>EPIPL_HUMAN (P58107) Epiplakin (450 kDa epidermal antigen)| Length = 5065 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/40 (45%), Positives = 20/40 (50%) Frame = +1 Query: 166 RGAEEA*GVRPDHRELAYAAQLTLD*GHEPGRAVGAGDVL 285 R EA RPD RE AA + + G GRAV DVL Sbjct: 4612 RAEAEAGSPRPDPREALRAATMEVKVGRLRGRAVPVWDVL 4651 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/40 (45%), Positives = 20/40 (50%) Frame = +1 Query: 166 RGAEEA*GVRPDHRELAYAAQLTLD*GHEPGRAVGAGDVL 285 R EA RPD RE AA + + G GRAV DVL Sbjct: 4078 RAEAEAGSPRPDPREALRAATMEVKVGRLRGRAVPVWDVL 4117 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/40 (45%), Positives = 20/40 (50%) Frame = +1 Query: 166 RGAEEA*GVRPDHRELAYAAQLTLD*GHEPGRAVGAGDVL 285 R EA RPD RE AA + + G GRAV DVL Sbjct: 3544 RAEAEAGSPRPDPREALRAATMEVKVGRLRGRAVPVWDVL 3583 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/40 (45%), Positives = 20/40 (50%) Frame = +1 Query: 166 RGAEEA*GVRPDHRELAYAAQLTLD*GHEPGRAVGAGDVL 285 R EA RPD RE AA + + G GRAV DVL Sbjct: 3010 RAEAEAGSPRPDPREALRAATMEVKVGRLRGRAVPVWDVL 3049 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/40 (45%), Positives = 20/40 (50%) Frame = +1 Query: 166 RGAEEA*GVRPDHRELAYAAQLTLD*GHEPGRAVGAGDVL 285 R EA RPD RE AA + + G GRAV DVL Sbjct: 2476 RAEAEAGSPRPDPREALRAATMEVKVGRLRGRAVPVWDVL 2515
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 13/62 (20%) Frame = -2 Query: 314 QPLSRSTAGRRTSPA------PTARPGSCP-------QSRVSCAAYASSRWSGRTPQASS 174 QP +R TA + PA PT PG P Q+ S A + GR PQA + Sbjct: 3818 QPTTRGTAPAASQPAGKPQPGPTTAPGPQPAGPPRAEQASSSKPPAAKAPQQGRAPQAQT 3877 Query: 173 AP 168 P Sbjct: 3878 TP 3879
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 28.5 bits (62), Expect = 4.4 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTS----PAPTARPGSCPQ---SRVSCAAYASSRWSGRTPQASSAP 168 ++A + +TAG R P PTARPG P + + AA A++ W T + S AP Sbjct: 108 AAAAAAAATATAGPRGEAPPPPPPTARPGERPDGAGAAAAAAAAAAAAWD--TLKISQAP 165
>RGYR1_SULTO (Q971T7) Reverse gyrase 1 [Includes: Helicase (EC 3.6.1.-);| Topoisomerase (EC 5.99.1.3)] Length = 1156 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 321 CGATFVPIYRGQKDVSCPYCASRFVPSVEGQLCSICELS 205 CG TF K +CPYC S F+ S E + ++ +LS Sbjct: 661 CGKTFTI-----KSNTCPYCGSVFISSSEKVVSALRKLS 694
>VE7_BPV5 (Q8BDG6) Protein E7| Length = 124 Score = 28.5 bits (62), Expect = 4.4 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -1 Query: 321 CGATFVPIYRGQKDVSCPYCASR 253 C + F + RG D+ CP+CASR Sbjct: 98 CISQFEQLLRGPLDLLCPHCASR 120
>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21| Length = 348 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWS 198 S + PLS S + R SP+ + P C SR A+ R S Sbjct: 289 SRSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPAHRPRRHS 331
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = -2 Query: 323 SAGQPLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASS 207 SA PL A ++P+PT PGS P V + A S Sbjct: 560 SASPPLPLPLARPPSTPSPTLNPGSPPGRSVDSCSQAQS 598
>MBD1_MOUSE (Q9Z2E2) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding| protein MBD1) Length = 636 Score = 27.7 bits (60), Expect = 7.5 Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = -1 Query: 321 CGATFVPIYRGQ---KDVSCPYCASRFVPSVEGQLCSICELSVVGADASGLLCSPTQSR 154 C A + R Q K V C CA+ V G +CS C L + ASGL C + R Sbjct: 175 CRAQRIAFNREQRMFKRVGCGDCAACLVKEDCG-VCSTCRLQLPSDVASGLYCKCERRR 232
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 27.7 bits (60), Expect = 7.5 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 19/90 (21%) Frame = -2 Query: 326 SSAGQPLSRSTAGRR-----TSPAPTARPGSCP--------QSRVSCAA---YA---SSR 204 SSA + +++TA T+P T+ PGSCP Q++ +C A YA + Sbjct: 324 SSATKTTTKTTATSTKTTTTTAPTATSTPGSCPVANQPCSTQNQYACTADGKYAVCDHGK 383 Query: 203 WSGRTPQASSAPLHNRDKISGDDDYCGFTS 114 W + +++ + D G YCG+ + Sbjct: 384 WVASSCPSNTVCIPTTD---GASIYCGYAT 410
>SEM4D_HUMAN (Q92854) Semaphorin-4D precursor (Leukocyte activation antigen| CD100) (BB18) (A8) (GR3) Length = 862 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/27 (44%), Positives = 13/27 (48%) Frame = -2 Query: 287 RRTSPAPTARPGSCPQSRVSCAAYASS 207 R P P RPG+C S A Y SS Sbjct: 357 RYNGPVPKPRPGACIDSEARAANYTSS 383
>NMDE3_MOUSE (Q01098) Glutamate [NMDA] receptor subunit epsilon 3 precursor| (N-methyl D-aspartate receptor subtype 2C) (NR2C) (NMDAR2C) Length = 1239 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 6/43 (13%) Frame = -2 Query: 284 RTSPAPTARPGSC---PQ---SRVSCAAYASSRWSGRTPQASS 174 R +P P ARP +C PQ SR SC +RW R S Sbjct: 965 RRAPQPPARPATCAGSPQPDVSRASCRHAWDARWPVRVGHQGS 1007
>H5_CAIMO (P06513) Histone H5| Length = 193 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTARP--GSCPQSRVSCAAYASSRWSGRTPQASSAP 168 S AG+ + A R TSP ARP P + AA + + S +P+ + P Sbjct: 105 SPAGRKKKKKAARRSTSPRKAARPRKARSPAKKPKAAARKARKKSRASPKKAKKP 159
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 27.3 bits (59), Expect = 9.8 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = -2 Query: 311 PLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSAPL 165 PLS S +G SP PT++P PQ + + G+ P + PL Sbjct: 38 PLSPSGSGSGPSPTPTSQPPPEPQGQ-------GQQVLGQVPDSDQQPL 79
>DUT_HUMAN (P33316) Deoxyuridine 5'-triphosphate nucleotidohydrolase,| mitochondrial precursor (EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase) Length = 252 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/49 (24%), Positives = 20/49 (40%) Frame = -2 Query: 314 QPLSRSTAGRRTSPAPTARPGSCPQSRVSCAAYASSRWSGRTPQASSAP 168 +P R A + P P + G Q + ++ W G P+A +P Sbjct: 41 RPAPRPPAAQHGIPRPLSSAGRLSQGCRGASTVGAAGWKGELPKAGGSP 89
>IL2RG_MOUSE (P34902) Cytokine receptor common gamma chain precursor (Gamma-C)| (Interleukin-2 receptor gamma chain) (IL-2R gamma chain) (p64) (CD132 antigen) Length = 369 Score = 27.3 bits (59), Expect = 9.8 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%) Frame = -2 Query: 326 SSAGQPLSRSTAGRRTSPAPTARPGSCPQSRVSCAA----YASSRW-SGRTPQASSAPLH 162 SSA + + T+P + P + P V C Y + W S PQA++ LH Sbjct: 30 SSANEDIKADLILTSTAPEHLSAP-TLPLPEVQCFVFNIEYMNCTWNSSSEPQATNLTLH 88 Query: 161 NRDKISGDDDY 129 R K+S ++ + Sbjct: 89 YRYKVSDNNTF 99
>PCQAP_MOUSE (Q924H2) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = -2 Query: 275 PAPTARPGSCPQSRVSC--AAYASSRWSGRTPQASSAPLHNR 156 P P+ +PGS P S VS A SS +PQ S +P+ R Sbjct: 456 PQPSPQPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTAR 497 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,664,630 Number of Sequences: 219361 Number of extensions: 759828 Number of successful extensions: 3121 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 2918 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3115 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)