Clone Name | rbastl45a07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RT22_HUMAN (P82650) Mitochondrial 28S ribosomal protein S22 (S22... | 32 | 0.83 | 2 | VG54_BPT4 (P13341) Tail-tube assembly protein Gp54 | 28 | 9.2 | 3 | TLK2_HUMAN (Q86UE8) Serine/threonine-protein kinase tousled-like... | 28 | 9.2 | 4 | TLK2_MOUSE (O55047) Serine/threonine-protein kinase tousled-like... | 28 | 9.2 | 5 | GERKB_BACSU (P49940) Spore germination protein KB | 28 | 9.2 |
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>RT22_HUMAN (P82650) Mitochondrial 28S ribosomal protein S22 (S22mt) (MRP-S22)| Length = 360 Score = 31.6 bits (70), Expect = 0.83 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -3 Query: 380 LAQPVSCSQTIKHQRTRFRKFCATYRVPEKRQPVFLYEKVEIVETR 243 L QP+ CS + R RF A PE ++P F+ E+V+ + T+ Sbjct: 36 LLQPLPCSFEMGLPRRRFSSEAAESGSPETKKPTFMDEEVQSILTK 81
>VG54_BPT4 (P13341) Tail-tube assembly protein Gp54| Length = 320 Score = 28.1 bits (61), Expect = 9.2 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +1 Query: 181 FKRSFIYLCYFPFVSLRMVLRLVSTISTFSYKNTG 285 F+R+ ++ C F L+S+IS FSY N G Sbjct: 16 FQRNNMFSCVFATTPSTKSSSLISSISNFSYNNLG 50
>TLK2_HUMAN (Q86UE8) Serine/threonine-protein kinase tousled-like 2 (EC| 2.7.11.1) (Tousled-like kinase 2) (PKU-alpha) Length = 772 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 Query: 331 DSESFVPPTVYLRNDNLYFYMRK*KLLRQDEAPS*ATQMEN 209 D++SF Y ++L FY+++ KL+ + EA S Q+ N Sbjct: 536 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVN 576
>TLK2_MOUSE (O55047) Serine/threonine-protein kinase tousled-like 2 (EC| 2.7.11.1) (Tousled-like kinase 2) Length = 718 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 Query: 331 DSESFVPPTVYLRNDNLYFYMRK*KLLRQDEAPS*ATQMEN 209 D++SF Y ++L FY+++ KL+ + EA S Q+ N Sbjct: 482 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVN 522
>GERKB_BACSU (P49940) Spore germination protein KB| Length = 373 Score = 28.1 bits (61), Expect = 9.2 Identities = 10/31 (32%), Positives = 20/31 (64%) Frame = +1 Query: 190 SFIYLCYFPFVSLRMVLRLVSTISTFSYKNT 282 SF+Y+ YF +++ R++ + TF+Y +T Sbjct: 83 SFLYILYFAYIAARVLRDFGEMLLTFAYHDT 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,062,993 Number of Sequences: 219361 Number of extensions: 1124162 Number of successful extensions: 2057 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2038 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2057 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)