ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl45a05 |
|---|---|
| Clone Library Name | barley_pub |
>GUX1_NEUCR (P38676) Exoglucanase 1 precursor (EC 3.2.1.91)| (Exocellobiohydrolase 1) (1,4-beta-cellobiohydrolase) Length = 516 Score = 30.8 bits (68), Expect = 0.86 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = -3 Query: 350 SSTPVHTPYISASQKPKTQELSSSTKLQHPS--YALHARSDDGMSMSESFACMHAYACAR 177 S TP P SAS T + SS++ +PS A H G+ S C Y CA+ Sbjct: 448 SGTPPSNPSSSASPTSSTAKPSSTSTASNPSGTGAAHWAQCGGIGFSGPTTCPEPYTCAK 507
>DPP10_RAT (Q6Q629) Inactive dipeptidyl peptidase 10 (Dipeptidyl peptidase X)| (Kv4 potassium channel auxiliary subunit) Length = 796 Score = 30.8 bits (68), Expect = 0.86 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 36 DHHFFHCNTVINTATNQETDAAA-SLEYLGRDMEREGVYRSSNV 164 D FF C TV+ ++ + A+A S YLG + E Y++S+V Sbjct: 664 DEKFFKCGTVVAPISDMKLYASAFSERYLGMPSKEESTYQASSV 707
>LIP1_GEOCN (P17573) Lipase 1 precursor (EC 3.1.1.3) (Lipase I) (GCL I)| Length = 563 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +1 Query: 121 DGTWRGRVCIGVATSTTTMRAHAYACMQANDSDMDMPSSLRACNAYEGCWS 273 +GT V I T+ + Y C +A+D+ +D R + Y G WS Sbjct: 373 EGTILAPVAINATTTPHVKKWLKYICSEASDASLD-----RVLSLYPGSWS 418
>UDPE_NPVMB (Q83140) Ecdysteroid UDP-glucosyltransferase precursor (EC 2.4.1.-)| Length = 528 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +3 Query: 87 ETDAAASLEYLGRDMEREGVYRSSNVDDDDA 179 E DA+ S EY GR M GV+R + D + Sbjct: 87 EIDASLSQEYYGRLMRHAGVFRKRGIVADSS 117
>YQV5_CAEEL (Q09554) Probable G-protein coupled receptor F27E5.5| Length = 377 Score = 27.7 bits (60), Expect = 7.3 Identities = 17/63 (26%), Positives = 29/63 (46%) Frame = -3 Query: 215 ESFACMHAYACARIVVVDVATPIHTLPLHVPSQILQASSCIRFLIRCCVNYSVTVKKMVV 36 E F C A+ ++ +A +T LH +IL S+C+ I Y + + +V Sbjct: 34 ELFFCFIAFPLNIFFIIIIA---NTTTLHRNLRILLISTCVADAIYAISRYMILIPLLVA 90 Query: 35 WLF 27 +LF Sbjct: 91 YLF 93
>KPCL_RAT (Q64617) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)| (PKC-L) Length = 683 Score = 27.7 bits (60), Expect = 7.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 259 HMHCMHVATTACPCQNH 209 H C H+ TAC CQN+ Sbjct: 211 HKRCHHLIVTACTCQNN 227
>KPCL_MOUSE (P23298) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)| (PKC-L) Length = 683 Score = 27.7 bits (60), Expect = 7.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 259 HMHCMHVATTACPCQNH 209 H C H+ TAC CQN+ Sbjct: 211 HKRCHHLIVTACTCQNN 227
>KPCL_HUMAN (P24723) Protein kinase C eta type (EC 2.7.11.13) (nPKC-eta)| (PKC-L) Length = 682 Score = 27.7 bits (60), Expect = 7.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 259 HMHCMHVATTACPCQNH 209 H C H+ TAC CQN+ Sbjct: 210 HKRCHHLIVTACTCQNN 226
>SAP_ARATH (Q9FKH1) Transcriptional regulator STERILE APETALA| Length = 446 Score = 27.7 bits (60), Expect = 7.3 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Frame = +1 Query: 97 QLLAWSIW------DGTWRGRVCIGVATSTT-TMRAHAYACMQANDSDMDMPSSL 240 QLL+ +W TWR T+ R H Y +Q + SD+D P SL Sbjct: 85 QLLSRQVWARTHLMHDTWRDEFIYRHRTARNFRTRTHTYFTLQFDPSDVDEPDSL 139
>BASI_CHICK (P17790) Basigin precursor (Blood-brain barrier HT7 antigen)| (Neurothelin) (5A11 antigen) Length = 388 Score = 27.3 bits (59), Expect = 9.5 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 11/46 (23%) Frame = +1 Query: 115 IWDGTWRGRVCIGV-----ATST------TTMRAHAYACMQANDSD 219 +WDG W+ RV I +TST T+ + Y C +ND D Sbjct: 75 LWDGAWQDRVQINATYNLHSTSTIYIANLTSDDSGTYECRASNDPD 120
>MASY_RICCO (P17815) Malate synthase, glyoxysomal (EC 2.3.3.9)| Length = 567 Score = 27.3 bits (59), Expect = 9.5 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +2 Query: 212 ILTWTCRRRYVHAM 253 +L WTC RR VHAM Sbjct: 333 LLVWTCHRRGVHAM 346
>OR6K2_HUMAN (Q8NGY2) Olfactory receptor 6K2| Length = 324 Score = 27.3 bits (59), Expect = 9.5 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = -3 Query: 137 PLHVPSQILQASSCIRFLIRCCVNYSVTVKKMVVWL 30 PLH PS I+ C + + CCV +T + W+ Sbjct: 128 PLHYPS-IMTPKLCTQLTLSCCVCGFITPLPEIAWI 162
>DDL_BUCBP (P59435) D-alanine--D-alanine ligase (EC 6.3.2.4) (D-alanylalanine| synthetase) (D-Ala-D-Ala ligase) Length = 309 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = +1 Query: 88 KRMQLLAWSIWDGTWRGRVCIGVATSTTTMRAHAYACMQANDSDMDMPSSLRACNAYE 261 K++ L AW+I DGT GRV + + A C D + S+ +A +Y+ Sbjct: 241 KKITLTAWNIIDGTGWGRVDVIMDYKNKFWLLEANTCPGMTDHSLFPMSAKKAGISYQ 298
>AA3R_MOUSE (Q61618) Adenosine A3 receptor (A3AR)| Length = 319 Score = 27.3 bits (59), Expect = 9.5 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Frame = -3 Query: 200 MHAYACARIVVVDVATPIHTLPLHVPSQILQASSCIRFL-IRCCVNYSVTVKKMVVWLFI 24 MH YAC + + I T H L A + R+L ++ V Y + +WLF+ Sbjct: 79 MHFYAC---LFMSCVLLIFT---HASIMSLLAIAVHRYLRVKLTVRYRTVTTQRRIWLFL 132 Query: 23 DLSW 12 L W Sbjct: 133 GLCW 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,112,389 Number of Sequences: 219361 Number of extensions: 776270 Number of successful extensions: 2020 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1977 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2020 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
