ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl45a02 |
|---|---|
| Clone Library Name | barley_pub |
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 63.2 bits (152), Expect = 2e-10 Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 12/70 (17%) Frame = -2 Query: 380 KVREGAGKEVVDPELVAAAAGDE------------EAQMMRFLEMALQCVDDFPSKRPNM 237 K REG EV+D +L+ + + +M+R+LE+AL+CVDDFPSKRPNM Sbjct: 1060 KAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNM 1119 Query: 236 LHVVAVLREI 207 L VVA LRE+ Sbjct: 1120 LQVVASLREL 1129
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 55.8 bits (133), Expect = 2e-08 Identities = 26/62 (41%), Positives = 42/62 (67%) Frame = -2 Query: 374 REGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPS 195 RE G E++DPELV +GD E + +L++A QC+DD P KRP M+ ++A+ +E+ A + Sbjct: 1084 REKRGAEILDPELVTDKSGDVE--LFHYLKIASQCLDDRPFKRPTMIQLMAMFKEMKADT 1141 Query: 194 SQ 189 + Sbjct: 1142 EE 1143
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 54.7 bits (130), Expect = 5e-08 Identities = 25/56 (44%), Positives = 39/56 (69%) Frame = -2 Query: 374 REGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREI 207 RE G E++DPELV +GD E ++ +L++A QC+DD P KRP M+ V+ + +E+ Sbjct: 1082 REKRGAEILDPELVTDKSGDVE--LLHYLKIASQCLDDRPFKRPTMIQVMTMFKEL 1135
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/58 (39%), Positives = 39/58 (67%) Frame = -2 Query: 380 KVREGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREI 207 K+ +G +V+DP LV+ A + + +R L++A+ C+ + P+KRPNML V+ L+EI Sbjct: 1138 KINQGKAVDVIDPLLVSVALKNSQ---LRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/69 (34%), Positives = 39/69 (56%) Frame = -2 Query: 371 EGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSS 192 +G +V D EL+ A E ++++ L++A C+DD KRP M+ V+A+ +EI A S Sbjct: 1110 KGKITDVFDRELLKEDASIE-IELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQAGSG 1168 Query: 191 QPPVTAAGA 165 + GA Sbjct: 1169 MDSTSTIGA 1177
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC 2.7.11.1)| (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 41.6 bits (96), Expect = 5e-04 Identities = 24/69 (34%), Positives = 39/69 (56%) Frame = -2 Query: 371 EGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSS 192 +G +V D EL+ A E ++++ L++A C+DD KRP M+ V+A+ +EI A S Sbjct: 1110 KGKITDVFDRELLKEDASIE-IELLQHLKVACACLDDRHWKRPTMIQVMAMFKEIQAGSG 1168 Query: 191 QPPVTAAGA 165 + GA Sbjct: 1169 MDSTSTIGA 1177
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 39.3 bits (90), Expect = 0.002 Identities = 20/54 (37%), Positives = 35/54 (64%) Frame = -2 Query: 356 EVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPS 195 +V DPEL+ E ++++ L++A+ C+DD +RP M+ V+A+ +EI A S Sbjct: 1110 DVFDPELMKEDPA-LEIELLQHLKVAVACLDDRAWRRPTMVQVMAMFKEIQAGS 1162
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 32.7 bits (73), Expect = 0.22 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = -2 Query: 377 VREGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLRE 210 +R E+VDP + G + R +E+ALQC++ + + RP M+ +V L + Sbjct: 818 IRASKVDEIVDPGI---KGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELED 870
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 32.7 bits (73), Expect = 0.22 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = -2 Query: 377 VREGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLRE 210 +R E+VDP + G + R +E+ALQC++ + + RP M+ +V L + Sbjct: 817 IRASKVDEIVDPGI---KGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELED 869
>PHK2_RHIME (Q92ZA4) Probable phosphoketolase 2 (EC 4.1.2.-)| Length = 779 Score = 30.8 bits (68), Expect = 0.83 Identities = 23/64 (35%), Positives = 31/64 (48%) Frame = -2 Query: 377 VREGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAP 198 V E A + DP+ V A AGD M L + + FPS R +++VV L + AP Sbjct: 593 VWEWASNDEGDPDAVVACAGD--VPTMEALAAVMIVREAFPSLRLRVVNVVD-LMALQAP 649 Query: 197 SSQP 186 S P Sbjct: 650 SQHP 653
>TOPK_BRARE (Q6DHU8) T-lymphokine-activated killer cell-originated protein| kinase homolog (EC 2.7.12.2) (PDZ-binding kinase) Length = 339 Score = 30.0 bits (66), Expect = 1.4 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = -2 Query: 344 PELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSSQ 189 P L A G R +E+ C ++ P KRP+ H+V VL S Q Sbjct: 283 PALDAVTLG---GSYQRMVELFCLCTEEDPQKRPSAAHIVQVLESNSQLSKQ 331
>LRRK1_HUMAN (Q38SD2) Leucine-rich repeat serine/threonine-protein kinase 1 (EC| 2.7.11.1) Length = 2038 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -2 Query: 314 EEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLRE 210 EE Q R + ++C D P KRP L VV+ +++ Sbjct: 1511 EEVQFRRLQALMMECWDTKPEKRPLALSVVSQMKD 1545
>LRRK1_MOUSE (Q3UHC2) Leucine-rich repeat serine/threonine-protein kinase 1 (EC| 2.7.11.1) Length = 2014 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -2 Query: 314 EEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLRE 210 EE Q R + ++C D P KRP L VV+ +++ Sbjct: 1488 EEVQFHRLQALMMECWDTKPEKRPLALSVVSQMKD 1522
>FHL1_YEAST (P39521) Pre-rRNA-processing protein FHL1| Length = 936 Score = 29.3 bits (64), Expect = 2.4 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -2 Query: 380 KVREGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVA 222 KV +G K++V+PE AAAA +AQ + + + P + P+ L A Sbjct: 696 KVTKGEVKQLVNPETTAAAALAAKAQHSKPIRQPIVQTPHVPDRPPSQLSASA 748
>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Length = 859 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/35 (48%), Positives = 17/35 (48%) Frame = +2 Query: 77 SHCNTYRQQLYDTKNHGGLVVTRRGHDHCTHLPPL 181 S C T DT HGG V RR D C LPPL Sbjct: 163 SFCKTLTAS--DTSTHGGFSVLRRHADEC--LPPL 193
>GSC_DROME (P54366) Homeobox protein goosecoid| Length = 419 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/64 (32%), Positives = 25/64 (39%) Frame = -2 Query: 338 LVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSSQPPVTAAGACN 159 L AAAA A FL +P+ PN +H AV A AA + Sbjct: 194 LAAAAASGFAASPSDFLVA-------YPNFYPNYMHAAAVAHVAAAQMQAHVSGAAAGLS 246 Query: 158 GHGH 147 GHGH Sbjct: 247 GHGH 250
>LEPA_LACSS (Q38W39) GTP-binding protein lepA| Length = 612 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = -2 Query: 338 LVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSSQPPVTAA 171 LV AA EAQ + + +A+ DD L +V V+ +ID PS+QP V A Sbjct: 109 LVVDAAQGVEAQTLANVYLAVD--DD--------LEIVPVINKIDLPSAQPDVVKA 154
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 28.5 bits (62), Expect = 4.1 Identities = 17/35 (48%), Positives = 17/35 (48%) Frame = +2 Query: 77 SHCNTYRQQLYDTKNHGGLVVTRRGHDHCTHLPPL 181 S C T DT HGG V RR D C LPPL Sbjct: 123 SFCKTLTAS--DTSTHGGFSVLRRHADDC--LPPL 153
>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC| 2.7.11.1) Length = 817 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 305 QMMRFLEMALQCVDDFPSKRPNMLHVVAVLREID 204 Q +++A+ C+++ SKRP M H V L D Sbjct: 783 QARTLIKLAVSCLEEDRSKRPTMEHAVQTLLSAD 816
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = -2 Query: 359 KEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSSQP 186 K+++D + +M R + L C++ P RP+M VV VL I + P Sbjct: 321 KQIMDKGIKGQYTTKVATEMAR---ITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVP 375
>PYRG_METMA (Q8Q0L8) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 534 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/66 (24%), Positives = 28/66 (42%) Frame = -2 Query: 380 KVREGAGKEVVDPELVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDA 201 K+R+ A + D L+ + + M FLE Q + PS+ +HV V+ ++ Sbjct: 124 KIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQMHREEPSENIVFIHVTLVMEDLQG 183 Query: 200 PSSQPP 183 P Sbjct: 184 EQKTKP 189
>ZN295_HUMAN (Q9ULJ3) Zinc finger protein 295 (Zinc finger and BTB| domain-containing protein 21) Length = 1066 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 3/78 (3%) Frame = -2 Query: 296 RFLEMALQCVDDFPSKRPNMLHVVAVLRE---IDAPSSQPPVTAAGACNGHGHDA*QRGL 126 RFL Q + P ++P ++ VA +E + +P V CN ++G Sbjct: 680 RFLSQFKQHIKMHPGEKPLGVNKVAKPKEHAPLASPVENKEVYQCRLCNAKLSSLLEQGS 739 Query: 125 HGFLCRIIAAYMCCNVMY 72 H LCR A C++ + Sbjct: 740 HERLCRNAAVCPYCSLRF 757
>RL5_ANOGA (O44248) 60S ribosomal protein L5| Length = 327 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 9/35 (25%) Frame = -1 Query: 156 SWPR-RVTTRP--------PWFFVSYNCCLYVLQC 79 SWPR R T++P P+FF S+ C + VL C Sbjct: 287 SWPRSRPTSKPKRLPRRRRPFFFSSWWCIILVLPC 321
>LEPA_THEFY (Q47RQ0) GTP-binding protein lepA| Length = 614 Score = 27.3 bits (59), Expect = 9.2 Identities = 20/56 (35%), Positives = 29/56 (51%) Frame = -2 Query: 338 LVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSSQPPVTAA 171 L+ AA EAQ + L MAL+ + L ++ VL +ID P++QP AA Sbjct: 108 LLVDAAQGIEAQTLANLYMALE----------HDLTIIPVLNKIDLPAAQPEKYAA 153
>LEPA_STRCO (Q9RDC9) GTP-binding protein lepA| Length = 622 Score = 27.3 bits (59), Expect = 9.2 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = -2 Query: 338 LVAAAAGDEEAQMMRFLEMALQCVDDFPSKRPNMLHVVAVLREIDAPSSQPPVTAAGACN 159 L+ AA EAQ + L +A++ N L ++ VL +ID P++QP A N Sbjct: 117 LLVDAAQGIEAQTLANLYLAME----------NDLTIIPVLNKIDLPAAQPEKFAEELAN 166 Query: 158 GHGHD 144 G D Sbjct: 167 LVGCD 171
>HT1_ARATH (Q2MHE4) Serine/threonine-protein kinase HT1 (EC 2.7.11.1) (High| leaf temperature protein 1) Length = 390 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -2 Query: 275 QCVDDFPSKRPNMLHVVAVLREID 204 +C + PSKRP+ ++VAVL + D Sbjct: 321 RCWSENPSKRPDFSNIVAVLEKYD 344 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,871,715 Number of Sequences: 219361 Number of extensions: 899368 Number of successful extensions: 2466 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 2399 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2463 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
