ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl45a02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194591.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0092N12.12), mRNA Length = 3333 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 198 cggcgcgtcgatctctctgagcacggcgaccacatgtagcatgttaggccgcttggacgg 257 ||||||||||| ||| ||||||| ||||||||| || |||||||| || ||||| || || Sbjct: 3312 cggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggg 3253 Query: 258 gaagtcgtccacgcactgcagcgccatctccaggaacct 296 ||||||||| ||||||||||||||||| |||| |||||| Sbjct: 3252 gaagtcgtcgacgcactgcagcgccatgtccatgaacct 3214 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 332 cgacgagctccgggtccacgacctccttcccggcgccttccctgaccttc 381 |||||||||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 3184 cgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttc 3135
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 198 cggcgcgtcgatctctctgagcacggcgaccacatgtagcatgttaggccgcttggacgg 257 ||||||||||| ||| ||||||| ||||||||| || |||||||| || ||||| || || Sbjct: 96837 cggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggg 96778 Query: 258 gaagtcgtccacgcactgcagcgccatctccaggaacct 296 ||||||||| ||||||||||||||||| |||| |||||| Sbjct: 96777 gaagtcgtcgacgcactgcagcgccatgtccatgaacct 96739 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 332 cgacgagctccgggtccacgacctccttcccggcgccttccctgaccttc 381 |||||||||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 96709 cgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttc 96660
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 198 cggcgcgtcgatctctctgagcacggcgaccacatgtagcatgttaggccgcttggacgg 257 ||||||||||| ||| ||||||| ||||||||| || |||||||| || ||||| || || Sbjct: 905717 cggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggg 905776 Query: 258 gaagtcgtccacgcactgcagcgccatctccaggaacct 296 ||||||||| ||||||||||||||||| |||| |||||| Sbjct: 905777 gaagtcgtcgacgcactgcagcgccatgtccatgaacct 905815 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 332 cgacgagctccgggtccacgacctccttcccggcgccttccctgaccttc 381 |||||||||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 905845 cgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttc 905894
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 198 cggcgcgtcgatctctctgagcacggcgaccacatgtagcatgttaggccgcttggacgg 257 ||||||||||| ||| ||||||| ||||||||| || |||||||| || ||||| || || Sbjct: 30465 cggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggg 30406 Query: 258 gaagtcgtccacgcactgcagcgccatctccaggaacct 296 ||||||||| ||||||||||||||||| |||| |||||| Sbjct: 30405 gaagtcgtcgacgcactgcagcgccatgtccatgaacct 30367 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 332 cgacgagctccgggtccacgacctccttcccggcgccttccctgaccttc 381 |||||||||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 30337 cgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttc 30288
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 198 cggcgcgtcgatctctctgagcacggcgaccacatgtagcatgttaggccgcttggacgg 257 ||||||||||| ||| ||||||| ||||||||| || |||||||| || ||||| || || Sbjct: 905717 cggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggg 905776 Query: 258 gaagtcgtccacgcactgcagcgccatctccaggaacct 296 ||||||||| ||||||||||||||||| |||| |||||| Sbjct: 905777 gaagtcgtcgacgcactgcagcgccatgtccatgaacct 905815 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 332 cgacgagctccgggtccacgacctccttcccggcgccttccctgaccttc 381 |||||||||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 905845 cgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttc 905894 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 15157503 cgcctcctcgtcgccggccg 15157522 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 4584693 cgcctcctcgtcgccggccg 4584712
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 101 bits (51), Expect = 2e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 198 cggcgcgtcgatctctctgagcacggcgaccacatgtagcatgttaggccgcttggacgg 257 ||||||||||| ||| ||||||| ||||||||| || |||||||| || ||||| || || Sbjct: 905714 cggcgcgtcgagctccctgagcatggcgaccacctgcagcatgtttgggcgctttgaggg 905773 Query: 258 gaagtcgtccacgcactgcagcgccatctccaggaacct 296 ||||||||| ||||||||||||||||| |||| |||||| Sbjct: 905774 gaagtcgtcgacgcactgcagcgccatgtccatgaacct 905812 Score = 60.0 bits (30), Expect = 5e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 332 cgacgagctccgggtccacgacctccttcccggcgccttccctgaccttc 381 |||||||||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 905842 cgacgagctccgggtcgagcacctccttcccggcgccgtccccgaccttc 905891 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 15165744 cgcctcctcgtcgccggccg 15165763 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 4585514 cgcctcctcgtcgccggccg 4585533
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccgcggccgc 332 ||||||||||||||||||||| ||||| Sbjct: 18739057 cgcctcctcgtcgccggccgccgccgc 18739031 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 11258952 cgcctcctcgtcgccggccg 11258971 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 9538349 cgcctcctcgtcgccggccg 9538368 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 9415592 cgcctcctcgtcgccggccg 9415573 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 8502568 cgcctcctcgtcgccggccg 8502587 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 5239123 cgcctcctcgtcgccggccg 5239142
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcggcc 330 ||||||||||||||||||||||| Sbjct: 11446582 cctcctcgtcgccggccgcggcc 11446560 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccgcggccgcgacga 337 |||||||||||||| |||||| ||||| |||| Sbjct: 22889051 cgcctcctcgtcgctggccgccgccgccacga 22889082 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 7065282 cgcctcctcgtcgccggccg 7065301 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 7033152 cgcctcctcgtcgccggccg 7033171 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 6771616 cgcctcctcgtcgccggccg 6771635 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 6762779 cgcctcctcgtcgccggccg 6762798
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccgcggccgc 332 ||||||||||||||||||||| ||||| Sbjct: 11450631 cgcctcctcgtcgccggccgccgccgc 11450605 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tcctcgtcgccggccgcggc 329 |||||||||||||||||||| Sbjct: 16157258 tcctcgtcgccggccgcggc 16157239 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13760017 cgcctcctcgtcgccggccg 13760036 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 9590337 cgcctcctcgtcgccggccg 9590318 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gcgcgtcgatctctctgagc 219 |||||||||||||||||||| Sbjct: 4002485 gcgcgtcgatctctctgagc 4002466
>emb|AL662977.3|OSJN00176 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D21, complete sequence Length = 160456 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccgcggccgc 332 ||||||||||||||||||||| ||||| Sbjct: 88195 cgcctcctcgtcgccggccgccgccgc 88169
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcggcc 330 ||||||||||||||||||||||| Sbjct: 716 cctcctcgtcgccggccgcggcc 694
>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1120F06 Length = 186712 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccgcggccgc 332 ||||||||||||||||||||| ||||| Sbjct: 14289 cgcctcctcgtcgccggccgccgccgc 14263
>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446G09 Length = 146898 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccgcggccgc 332 ||||||||||||||||||||| ||||| Sbjct: 60151 cgcctcctcgtcgccggccgccgccgc 60125
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcggcc 330 ||||||||||||||||||||||| Sbjct: 60571 cctcctcgtcgccggccgcggcc 60549
>ref|XM_463492.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2037 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ctgcgcctcctcgtcgccggccgcgg 328 ||||||||||||||||||||| |||| Sbjct: 1183 ctgcgcctcctcgtcgccggcagcgg 1158
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 tccacgcactgcagcgccatct 286 |||||||||||||||||||||| Sbjct: 64202 tccacgcactgcagcgccatct 64181
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 tccacgcactgcagcgccatct 286 |||||||||||||||||||||| Sbjct: 16740092 tccacgcactgcagcgccatct 16740071 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 17122778 cgcctcctcgtcgccggccg 17122759 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13965573 cgcctcctcgtcgccggccg 13965592 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13961209 cgcctcctcgtcgccggccg 13961228 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13956856 cgcctcctcgtcgccggccg 13956875 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tcctcgtcgccggccgcggc 329 |||||||||||||||||||| Sbjct: 1644858 tcctcgtcgccggccgcggc 1644877 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 1519856 cgcctcctcgtcgccggccg 1519837
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ctgcgcctcctcgtcgccggccgcgg 328 ||||||||||||||||||||| |||| Sbjct: 37823966 ctgcgcctcctcgtcgccggcagcgg 37823941 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 36313226 cgcctcctcgtcgccggccg 36313207 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13049605 cgcctcctcgtcgccggccg 13049624 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13045114 cgcctcctcgtcgccggccg 13045133
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ctgcgcctcctcgtcgccggccgcgg 328 ||||||||||||||||||||| |||| Sbjct: 45322 ctgcgcctcctcgtcgccggcagcgg 45297
>dbj|AK063096.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-C01, full insert sequence Length = 818 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 265 tccacgcactgcagcgccatct 286 |||||||||||||||||||||| Sbjct: 352 tccacgcactgcagcgccatct 331
>gb|AF119361.1|AF119361 Frankia sp. EuIK1 NifK (nifK), NifE (nifE), NifN (nifN), NifX (nifX), NifW (nifW), NifZ (nifZ), NifB (nifB), NifV (nifV), NifS (nifS), ferredoxin oxidoreductase a-subunit, ferredoxin oxidoreductase b-subunit, and ferredoxin I (fdxI) genes, complete cds; and unknown genes Length = 15056 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 307 gcctcctcgtcgccggccgcggccgcgacg 336 |||||||||||||||||| | ||||||||| Sbjct: 5138 gcctcctcgtcgccggcccccgccgcgacg 5167
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ctgcgcctcctcgtcgccggccgcgg 328 ||||||||||||||||||||| |||| Sbjct: 83214 ctgcgcctcctcgtcgccggcagcgg 83189
>ref|XM_528233.1| PREDICTED: Pan troglodytes similar to potassium voltage-gated channel KQT-like protein 3; potassium channel, voltage-gated, subfamily Q, member 3 (LOC472861), mRNA Length = 615 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcggccgcg 333 |||||||||||||||||| |||||| Sbjct: 345 ctcctcgtcgccggccgccgccgcg 321
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 319 ccggccgcggccgcgacgagctccg 343 |||||||||||||||||| |||||| Sbjct: 1314860 ccggccgcggccgcgacgggctccg 1314884
>gb|AF071478.1|AH007067S01 Homo sapiens potassium channel (KCNQ3) gene, exon 1 Length = 807 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcggccgcg 333 |||||||||||||||||| |||||| Sbjct: 345 ctcctcgtcgccggccgccgccgcg 321
>gb|AC123925.4| Mus musculus BAC clone RP24-292N2 from chromosome 15, complete sequence Length = 166696 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gcactgcagcgccatctccag 290 ||||||||||||||||||||| Sbjct: 8835 gcactgcagcgccatctccag 8855
>gb|AF325548.1|AF325548 Bos taurus potassium voltage-gated channel (KCNQ3) mRNA, complete cds Length = 2671 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcggccgcg 333 |||||||||||||||||| |||||| Sbjct: 145 ctcctcgtcgccggccgctgccgcg 121
>ref|NM_004519.2| Homo sapiens potassium voltage-gated channel, KQT-like subfamily, member 3 (KCNQ3), mRNA Length = 3097 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcggccgcg 333 |||||||||||||||||| |||||| Sbjct: 345 ctcctcgtcgccggccgccgccgcg 321
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 gcgcctcctcgtcgccggccg 325 ||||||||||||||||||||| Sbjct: 2686143 gcgcctcctcgtcgccggccg 2686163 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gtcgccggccgcggccgcga 334 |||||||||||||||||||| Sbjct: 4357848 gtcgccggccgcggccgcga 4357829
>gb|AC018540.13| Homo sapiens chromosome 8, clone RP11-399G1, complete sequence Length = 179614 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcggccgcg 333 |||||||||||||||||| |||||| Sbjct: 88304 ctcctcgtcgccggccgccgccgcg 88280
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 gtcgccggccgcggccgcgac 335 ||||||||||||||||||||| Sbjct: 4310418 gtcgccggccgcggccgcgac 4310398
>ref|NM_174374.2| Bos taurus potassium voltage-gated channel, KQT-like subfamily, member 3 (KCNQ3), mRNA Length = 2671 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcggccgcg 333 |||||||||||||||||| |||||| Sbjct: 145 ctcctcgtcgccggccgctgccgcg 121
>ref|XM_475116.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 381 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 132 cgcctcctcgtcgccggccg 113
>ref|NM_190582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 549 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 495 cgcctcctcgtcgccggccg 514
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 66913 cgcctcctcgtcgccggccg 66894
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tcctcgtcgccggccgcggc 329 |||||||||||||||||||| Sbjct: 97018 tcctcgtcgccggccgcggc 97037
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 45650 cgcctcctcgtcgccggccg 45669 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 41286 cgcctcctcgtcgccggccg 41305 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 36933 cgcctcctcgtcgccggccg 36952
>gb|AY359575.1| Zea mays W64A acc oxidase (ACO20) mRNA, complete cds Length = 1262 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cctcgtcgccggccgcggcc 330 |||||||||||||||||||| Sbjct: 307 cctcgtcgccggccgcggcc 288
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgacgacggcgcgtcgatct 211 |||||||||||||||||||| Sbjct: 779921 cgacgacggcgcgtcgatct 779902
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 116145 cgcctcctcgtcgccggccg 116126
>ref|XM_676172.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7995.2), mRNA Length = 1140 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tccttcccggcgccttccct 374 |||||||||||||||||||| Sbjct: 990 tccttcccggcgccttccct 971
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cctcctcgtcgccggccgcg 327 |||||||||||||||||||| Sbjct: 2206112 cctcctcgtcgccggccgcg 2206131
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 305 gcgcctcctcgtcgccggccgcggccgcgacg 336 |||||||| || |||||||| ||||||||||| Sbjct: 66078 gcgcctccacggcgccggccacggccgcgacg 66047
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 305 gcgcctcctcgtcgccggccgcggccgcgacg 336 |||||||| || |||||||| ||||||||||| Sbjct: 64945 gcgcctccacggcgccggccacggccgcgacg 64914
>gb|AC124518.4| Mus musculus BAC clone RP23-392E7 from chromosome 18, complete sequence Length = 222376 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 atcacattgcaacacatata 95 |||||||||||||||||||| Sbjct: 136030 atcacattgcaacacatata 136011
>gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0050G15, complete sequence Length = 152556 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 35482 cgcctcctcgtcgccggccg 35463
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cctcctcgtcgccggccgcg 327 |||||||||||||||||||| Sbjct: 96406 cctcctcgtcgccggccgcg 96425
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgacgacggcgcgtcgatct 211 |||||||||||||||||||| Sbjct: 2100183 cgacgacggcgcgtcgatct 2100164 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 tcgccggccgcggccgcgacgagc 339 |||||| ||||||||||||||||| Sbjct: 162991 tcgccgcccgcggccgcgacgagc 162968
>emb|AL663014.3|OSJN00212 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0067G11, complete sequence Length = 156983 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 20143 cgcctcctcgtcgccggccg 20162
>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09, complete sequence Length = 123375 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 115943 cgcctcctcgtcgccggccg 115962
>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12, complete sequence Length = 138715 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 136467 cgcctcctcgtcgccggccg 136486 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13713 cgcctcctcgtcgccggccg 13694
>emb|AL606996.3|OSJN00123 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0071D01, complete sequence Length = 78794 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 35137 cgcctcctcgtcgccggccg 35156
>gb|AC113337.2| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0061H20, from chromosome 10, complete sequence Length = 135876 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 10737 cgcctcctcgtcgccggccg 10756
>gb|AC074355.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071I20, complete sequence Length = 145510 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 132056 cgcctcctcgtcgccggccg 132075
>gb|BC114123.1| Bos taurus cDNA clone MGC:137260 IMAGE:8166197, complete cds Length = 2552 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 tccttcccggcgccttccct 374 |||||||||||||||||||| Sbjct: 30 tccttcccggcgccttccct 11
>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17, complete sequence Length = 141041 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 11202 cgcctcctcgtcgccggccg 11221
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gtcgccggccgcggccgcga 334 |||||||||||||||||||| Sbjct: 1512268 gtcgccggccgcggccgcga 1512249
>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 Length = 1725576 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 15 ctgctttatttagtacagtagtccaact 42 ||||||||||||||||| || ||||||| Sbjct: 1400842 ctgctttatttagtacactactccaact 1400815
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 305 gcgcctcctcgtcgccggccgcggccgcgacg 336 |||||||| || |||||||| ||||||||||| Sbjct: 65317 gcgcctccacggcgccggccacggccgcgacg 65286
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcg 327 |||||||||||||||||||| Sbjct: 119944 cctcctcgtcgccggccgcg 119925
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgacgacggcgcgtcgatct 211 |||||||||||||||||||| Sbjct: 1674571 cgacgacggcgcgtcgatct 1674552
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 26840636 cgcctcctcgtcgccggccg 26840655 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 20250532 cgcctcctcgtcgccggccg 20250513 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 16490826 cgcctcctcgtcgccggccg 16490807 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 16482456 cgcctcctcgtcgccggccg 16482437 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13287709 cgcctcctcgtcgccggccg 13287690 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 cctcctcgtcgccggccgcggccg 331 ||||||||||||||||||| |||| Sbjct: 3437500 cctcctcgtcgccggccgccgccg 3437523
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 6093492 cgcctcctcgtcgccggccg 6093473
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 5165346 cgcctcctcgtcgccggccg 5165327 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 1387910 cgcctcctcgtcgccggccg 1387929
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 15747320 cgcctcctcgtcgccggccg 15747339
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cctcctcgtcgccggccgcg 327 |||||||||||||||||||| Sbjct: 2206124 cctcctcgtcgccggccgcg 2206143
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 18427228 cgcctcctcgtcgccggccg 18427247
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 66116 cgcctcctcgtcgccggccg 66135
>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4, complete sequence Length = 160565 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cacaaaaaaccatggaggcc 131 |||||||||||||||||||| Sbjct: 46158 cacaaaaaaccatggaggcc 46139
>gb|AC097347.6| Homo sapiens X BAC RP11-1M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160325 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gctttatttagtacagtagt 36 |||||||||||||||||||| Sbjct: 33904 gctttatttagtacagtagt 33885
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 63103 cgcctcctcgtcgccggccg 63084
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 tcctcgtcgccggccgcggc 329 |||||||||||||||||||| Sbjct: 127591 tcctcgtcgccggccgcggc 127572
>gb|AC173833.2| Pan troglodytes chromosome X clone CH251-45A9 map human ortholog p11.4, complete sequence Length = 162519 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 cacaaaaaaccatggaggcc 131 |||||||||||||||||||| Sbjct: 159948 cacaaaaaaccatggaggcc 159929
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 25326 cgcctcctcgtcgccggccg 25345 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 20835 cgcctcctcgtcgccggccg 20854
>dbj|AP004320.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1008_F01 Length = 128472 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 88573 cgcctcctcgtcgccggccg 88592 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 84082 cgcctcctcgtcgccggccg 84101
>dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G04 Length = 144644 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 286 cgcctcctcgtcgccggccg 267
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 167463 cgcctcctcgtcgccggccg 167444
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 82958 cgcctcctcgtcgccggccg 82977
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 6023 cgcctcctcgtcgccggccg 6042
>dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1059D01 Length = 158792 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 98067 cgcctcctcgtcgccggccg 98048
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409D09 Length = 150485 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 111009 cgcctcctcgtcgccggccg 111028
>dbj|AP005690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0052I14 Length = 168285 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 45181 cgcctcctcgtcgccggccg 45200
>dbj|AP003843.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1656_E11 Length = 116211 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gcgcgtcgatctctctgagc 219 |||||||||||||||||||| Sbjct: 105211 gcgcgtcgatctctctgagc 105192
>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0001A11 Length = 153252 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 90152 cgcctcctcgtcgccggccg 90171
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 22335 cgcctcctcgtcgccggccg 22354 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13498 cgcctcctcgtcgccggccg 13517
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0104B02 Length = 169588 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccgcggccgcgacga 337 |||||||||||||| |||||| ||||| |||| Sbjct: 62889 cgcctcctcgtcgctggccgccgccgccacga 62920
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1165C09 Length = 202985 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 183330 cgcctcctcgtcgccggccg 183349 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 151200 cgcctcctcgtcgccggccg 151219
>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0089L03 Length = 172106 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 124018 cgcctcctcgtcgccggccg 124037 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 115181 cgcctcctcgtcgccggccg 115200
>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0674B07 Length = 192191 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 110768 cgcctcctcgtcgccggccg 110787 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 78638 cgcctcctcgtcgccggccg 78657
>dbj|AK107532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-G12, full insert sequence Length = 1935 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcg 327 |||||||||||||||||||| Sbjct: 703 cctcctcgtcgccggccgcg 684
>dbj|AK107125.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-B10, full insert sequence Length = 1521 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcggccg 331 ||||||||||||||||||| |||| Sbjct: 461 cctcctcgtcgccggccgccgccg 438
>gb|AY108383.1| Zea mays PCO085007 mRNA sequence Length = 1245 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 ggaggctgcgacgacggcgcgtcg 207 |||| ||||||||||||||||||| Sbjct: 77 ggagcctgcgacgacggcgcgtcg 54
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cgacgacggcgcgtcgatct 211 |||||||||||||||||||| Sbjct: 968609 cgacgacggcgcgtcgatct 968628 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 tcgccggccgcggccgcgacgagc 339 |||||| ||||||||||||||||| Sbjct: 234540 tcgccgcccgcggccgcgacgagc 234517
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcggccg 331 ||||||||||||||||| |||||| Sbjct: 2126689 cctcctcgtcgccggcctcggccg 2126666
>gb|U83910.1|MBU83910 Microbispora bispora partial ribosomal RNA operon B including 16S ribosomal RNA gene, complete sequence Length = 2751 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 ctcctcgtcgccggccgcgg 328 |||||||||||||||||||| Sbjct: 250 ctcctcgtcgccggccgcgg 231
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 6159959 cgcctcctcgtcgccggccg 6159940
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 26768806 cgcctcctcgtcgccggccg 26768825 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 20176746 cgcctcctcgtcgccggccg 20176727 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 16444059 cgcctcctcgtcgccggccg 16444040 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 16435689 cgcctcctcgtcgccggccg 16435670 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 13241983 cgcctcctcgtcgccggccg 13241964 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 cctcctcgtcgccggccgcggccg 331 ||||||||||||||||||| |||| Sbjct: 3437445 cctcctcgtcgccggccgccgccg 3437468
>emb|AL731637.2|OSJN00278 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I09, complete sequence Length = 141580 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 127576 cgcctcctcgtcgccggccg 127595
>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09, complete sequence Length = 160462 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 20455 cgcctcctcgtcgccggccg 20474
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 44603 cgcctcctcgtcgccggccg 44622
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 91334 cgcctcctcgtcgccggccg 91353 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 82964 cgcctcctcgtcgccggccg 82983
>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152862 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 114766 cgcctcctcgtcgccggccg 114747
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 43034 cgcctcctcgtcgccggccg 43053
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 308 cctcctcgtcgccggccgcggccg 331 ||||||||||||||||||| |||| Sbjct: 94415 cctcctcgtcgccggccgccgccg 94392
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 cctcctcgtcgccggccgcggccg 331 ||||||||||||||||||| |||| Sbjct: 116553 cctcctcgtcgccggccgccgccg 116576
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cgcctcctcgtcgccggccg 325 |||||||||||||||||||| Sbjct: 113936 cgcctcctcgtcgccggccg 113917 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,586,797 Number of Sequences: 3902068 Number of extensions: 2586797 Number of successful extensions: 57867 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54438 Number of HSP's gapped (non-prelim): 3429 length of query: 381 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 359 effective length of database: 17,147,199,772 effective search space: 6155844718148 effective search space used: 6155844718148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
