>VMP_CAMVW (Q01089) Movement protein (Cell-to-cell transport protein)|
          Length = 327

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +2

Query: 125 HTRKDCIIGASSGRL----YMYTTYP 190
           ++RKDC++GA+ G L    +M+T YP
Sbjct: 158 NSRKDCLLGAAKGNLAYGKFMFTVYP 183

>Y1942_ARCFU (O28337) Hypothetical protein AF1942|
          Length = 184

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 59  YIHMKEGDCFREFTKSQVAGTNHTRKDCIIGASSGRLYMYTTYP 190
           Y+H  +GD       +   G +   KDC I +SSG    +TTYP
Sbjct: 62  YLHTNDGDLSSNSGATISPGKSIFVKDCFIASSSGE---WTTYP 102

>VMP_CAMVS (P03545) Movement protein (Cell-to-cell transport protein)|
          Length = 327

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +2

Query: 125 HTRKDCIIGASSGRL----YMYTTYP 190
           ++R+DC++GA+ G L    +M+T YP
Sbjct: 158 NSRRDCLLGAAKGNLAYGKFMFTVYP 183

>VMP_CAMVN (Q00966) Movement protein (Cell-to-cell transport protein)|
          Length = 327

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +2

Query: 125 HTRKDCIIGASSGRL----YMYTTYP 190
           ++R+DC++GA+ G L    +M+T YP
Sbjct: 158 NSRRDCLLGAAKGNLAYGKFMFTVYP 183

>VMP_CAMVE (Q02968) Movement protein (Cell-to-cell transport protein)|
          Length = 327

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +2

Query: 125 HTRKDCIIGASSGRL----YMYTTYP 190
           ++R+DC++GA+ G L    +M+T YP
Sbjct: 158 NSRRDCLLGAAKGNLAYGKFMFTVYP 183

>VMP_CAMVD (P03547) Movement protein (Cell-to-cell transport protein)|
          Length = 327

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +2

Query: 125 HTRKDCIIGASSGRL----YMYTTYP 190
           ++R+DC++GA+ G L    +M+T YP
Sbjct: 158 NSRRDCLLGAAKGNLAYGKFMFTVYP 183

>VMP_CAMVC (P03546) Movement protein (Cell-to-cell transport protein)|
          Length = 327

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 4/26 (15%)
 Frame = +2

Query: 125 HTRKDCIIGASSGRL----YMYTTYP 190
           ++R+DC++GA+ G L    +M+T YP
Sbjct: 158 NSRRDCLLGAAKGNLAYGKFMFTVYP 183

>PACR_BOVIN (Q29627) Pituitary adenylate cyclase-activating polypeptide type I|
           receptor precursor (PACAP type I receptor) (PACAP-R-1)
          Length = 513

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 106 RFCKLSKAVTFLHMNVLLAMSLSVICYLCKGWFFF 2
           RF KL     F+HMN+ ++  L  I    K W  +
Sbjct: 194 RFRKLHCTRNFIHMNLFVSFMLRAISVFIKDWILY 228

>PACR_RAT (P32215) Pituitary adenylate cyclase-activating polypeptide type IA|
           receptor precursor (PACAP type IA receptor) (PACAP-R-1)
          Length = 523

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 106 RFCKLSKAVTFLHMNVLLAMSLSVICYLCKGWFFF 2
           RF KL     F+HMN+ ++  L  I    K W  +
Sbjct: 176 RFRKLHCTRNFIHMNLFVSFMLRAISVFIKDWILY 210

>PACR_HUMAN (P41586) Pituitary adenylate cyclase-activating polypeptide type I|
           receptor precursor (PACAP type I receptor) (PACAP-R-1)
          Length = 468

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 106 RFCKLSKAVTFLHMNVLLAMSLSVICYLCKGWFFF 2
           RF KL     F+HMN+ ++  L  I    K W  +
Sbjct: 177 RFRKLHCTRNFIHMNLFVSFMLRAISVFIKDWILY 211

>PACR_MOUSE (P70205) Pituitary adenylate cyclase-activating polypeptide type I|
           receptor precursor (PACAP type I receptor) (PACAP-R-1)
          Length = 496

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -1

Query: 106 RFCKLSKAVTFLHMNVLLAMSLSVICYLCKGWFFF 2
           RF KL     F+HMN+ ++  L  I    K W  +
Sbjct: 177 RFRKLHCTRNFIHMNLFVSFMLRAISVFIKDWILY 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,926,068
Number of Sequences: 219361
Number of extensions: 795411
Number of successful extensions: 1487
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)