Clone Name | rbastl44h09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-... | 28 | 4.4 | 2 | EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5) | 28 | 7.5 |
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>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated| transcription factor 1) (DATF-1) (hDido1) Length = 2240 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Frame = -1 Query: 299 AADEAVQLTLPG------PSPEQPTHRTAASIIPHLPLPWTA 192 +AD AV T PG P PE P + +S+ P P P TA Sbjct: 1248 SADAAVSTTPPGSPPPPPPLPEPPVLKVLSSLKPAAPSPATA 1289
>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)| Length = 427 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 313 YGSPPPPMKPYN*LFLVHRRSSQHTAPPPV 224 Y SPPPP+K Y +H +PPPV Sbjct: 27 YSSPPPPVKHYT-------PPVKHYSPPPV 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,825,977 Number of Sequences: 219361 Number of extensions: 690171 Number of successful extensions: 1787 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1786 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)