>gb|AC117218.3| Mus musculus BAC clone RP23-344B4 from 15, complete sequence
          Length = 179858

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     atagataactgttagctgaa 111
              ||||||||||||||||||||
Sbjct: 129749 atagataactgttagctgaa 129768

>emb|CR388061.11| Zebrafish DNA sequence from clone DKEY-69P22 in linkage group 5,
             complete sequence
          Length = 122069

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aatggttaaacagacaaaaa 55
             ||||||||||||||||||||
Sbjct: 94877 aatggttaaacagacaaaaa 94896

>gb|AC109461.3| Homo sapiens chromosome 5 clone RP11-269G2, complete sequence
          Length = 89234

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    taaacagacaaaaaattcta 61
             ||||||||||||||||||||
Sbjct: 88198 taaacagacaaaaaattcta 88217

>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold
          Length = 1889755

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     atagataactgttagctgaa 111
              ||||||||||||||||||||
Sbjct: 588415 atagataactgttagctgaa 588396

>gb|AC016657.5| Homo sapiens chromosome 5 clone RP1-6C3, complete sequence
          Length = 128447

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    taaacagacaaaaaattcta 61
             ||||||||||||||||||||
Sbjct: 16946 taaacagacaaaaaattcta 16965

>gb|AC124040.3| Oryctolagus cuniculus clone LB1-18E1, complete sequence
          Length = 206755

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    atagataactgttagctgaa 111
             ||||||||||||||||||||
Sbjct: 51599 atagataactgttagctgaa 51580

>emb|AJ340047.1|HSA340047 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-IA12R
          Length = 734

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 31  tgggaaatggttaaacagacaaaaaatt 58
           ||||||| ||||||| ||||||||||||
Sbjct: 651 tgggaaaaggttaaaaagacaaaaaatt 624

>gb|AC153605.2| Mus musculus 6 BAC RP23-346H23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 229744

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 22     tggtagatctgggaaatggttaaacaga 49
              ||||||| ||||||||||||| ||||||
Sbjct: 117521 tggtagagctgggaaatggttgaacaga 117494

>gb|AC154555.3| Mus musculus BAC clone RP23-418L12 from chromosome 16, complete
             sequence
          Length = 192614

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    ctgggaaatggttaaacag 48
             |||||||||||||||||||
Sbjct: 59215 ctgggaaatggttaaacag 59233

>gb|AC091152.18| Homo sapiens chromosome 17, clone RP11-1072C15, complete sequence
          Length = 181835

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 103    ttagctgaagtgcagagga 121
              |||||||||||||||||||
Sbjct: 142359 ttagctgaagtgcagagga 142377

>gb|AC017000.5| Homo sapiens BAC clone RP11-42B7 from 7, complete sequence
          Length = 154844

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 106    gctgaagtgcagaggacag 124
              |||||||||||||||||||
Sbjct: 153451 gctgaagtgcagaggacag 153433

>gb|AC182472.3| Pan troglodytes BAC clone CH251-394C9 from chromosome 19, complete
              sequence
          Length = 165954

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 90     caatagataactgttagct 108
              |||||||||||||||||||
Sbjct: 117438 caatagataactgttagct 117456

>dbj|AK096357.1| Homo sapiens cDNA FLJ39038 fis, clone NT2RP7009267
          Length = 3483

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 103  ttagctgaagtgcagagga 121
            |||||||||||||||||||
Sbjct: 1387 ttagctgaagtgcagagga 1405

>gb|AC009990.9| Homo sapiens chromosome 05 clone RP11-94N1, complete sequence
          Length = 159772

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    gttaaaatcatggtagatc 30
             |||||||||||||||||||
Sbjct: 50524 gttaaaatcatggtagatc 50542

>gb|AC068944.5| Homo sapiens BAC clone RP11-769N22 from 4, complete sequence
          Length = 169662

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    taaacagacaaaaaattct 60
             |||||||||||||||||||
Sbjct: 99706 taaacagacaaaaaattct 99688

>gb|AF304007.1| Gossypium hirsutum OSMIV and OSMIII pseudogenes, complete sequence;
            and osmotin-like protein (OSMII) gene, promoter region
            and complete cds
          Length = 8914

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 26   agatctgggaaatggttaa 44
            |||||||||||||||||||
Sbjct: 7840 agatctgggaaatggttaa 7822

>gb|AC010259.7| Homo sapiens chromosome 5 clone CTC-454M9, complete sequence
          Length = 195476

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 12    gttaaaatcatggtagatc 30
             |||||||||||||||||||
Sbjct: 59147 gttaaaatcatggtagatc 59165

>gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, complete sequence
          Length = 165193

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 12     gttaaaatcatggtagatc 30
              |||||||||||||||||||
Sbjct: 147775 gttaaaatcatggtagatc 147793

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 91      aatagataactgttagctg 109
               |||||||||||||||||||
Sbjct: 2460589 aatagataactgttagctg 2460607

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 64       gaacttgagatttgatgag 82
                |||||||||||||||||||
Sbjct: 11923125 gaacttgagatttgatgag 11923143

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 54       aaattctacggaacttgag 72
                |||||||||||||||||||
Sbjct: 13083242 aaattctacggaacttgag 13083224

>gb|AC011500.7| Homo sapiens chromosome 19 clone CTB-60E11, complete sequence
          Length = 200430

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 90     caatagataactgttagct 108
              |||||||||||||||||||
Sbjct: 148967 caatagataactgttagct 148985

>gb|AC010685.3|AC010685 Homo sapiens BAC clone RP11-465A8 from Y, complete sequence
          Length = 160302

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    gttaaacagacaaaaaatt 58
             |||||||||||||||||||
Sbjct: 23236 gttaaacagacaaaaaatt 23254

>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           BAC clone:OSJNBa0012F14
          Length = 168629

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 54  aaattctacggaacttgag 72
           |||||||||||||||||||
Sbjct: 430 aaattctacggaacttgag 412

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 91      aatagataactgttagctg 109
               |||||||||||||||||||
Sbjct: 3437750 aatagataactgttagctg 3437768

>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0531C01
          Length = 158574

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     aaattctacggaacttgag 72
              |||||||||||||||||||
Sbjct: 122043 aaattctacggaacttgag 122025

>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1114D08
          Length = 148354

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    gaacttgagatttgatgag 82
             |||||||||||||||||||
Sbjct: 54166 gaacttgagatttgatgag 54184

>emb|BX000534.11| Zebrafish DNA sequence from clone DKEY-26G8 in linkage group 12,
             complete sequence
          Length = 199670

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    atggttaaacagacaaaaa 55
             |||||||||||||||||||
Sbjct: 23828 atggttaaacagacaaaaa 23810

>emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 in linkage group 14,
             complete sequence
          Length = 167962

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    ggaaatggttaaacagacaaaaa 55
             ||||| |||||||||||||||||
Sbjct: 86793 ggaaaaggttaaacagacaaaaa 86771

>gb|AC097264.4| Pan troglodytes BAC RP43-175I2 (Roswell Park Cancer Institute Male
              Chimpanzee BAC Library) complete sequence
          Length = 173720

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 103    ttagctgaagtgcagagga 121
              |||||||||||||||||||
Sbjct: 131651 ttagctgaagtgcagagga 131633

>dbj|AP000760.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-779L16, complete
              sequence
          Length = 177490

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 44     aacagacaaaaaattctac 62
              |||||||||||||||||||
Sbjct: 149073 aacagacaaaaaattctac 149055

>dbj|AP003441.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-781E6, complete
             sequence
          Length = 199495

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 44    aacagacaaaaaattctac 62
             |||||||||||||||||||
Sbjct: 61843 aacagacaaaaaattctac 61825

>gb|AC005821.1|AC005821 Homo sapiens chromosome 17, clone hRPK.156_L_14, complete sequence
          Length = 174428

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    ctgggaaatggttaaacag 48
             |||||||||||||||||||
Sbjct: 32632 ctgggaaatggttaaacag 32614

>gb|U83435.1|TBU83435 Trypanosoma brucei metacyclic variable antigen variant surface
           glycoprotein 7 gene, complete cds
          Length = 4920

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 41  ttaaacagacaaaaaattc 59
           |||||||||||||||||||
Sbjct: 367 ttaaacagacaaaaaattc 385

>gb|AC004478.1|AC004478 Homo Sapiens Chromosome X clone bWXD312, complete sequence
          Length = 151822

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    gttaaacagacaaaaaatt 58
             |||||||||||||||||||
Sbjct: 82169 gttaaacagacaaaaaatt 82151

>gb|AC004388.1|AC004388 Homo Sapiens Chromosome X clone bWXD306, complete sequence
          Length = 243041

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     gttaaacagacaaaaaatt 58
              |||||||||||||||||||
Sbjct: 231315 gttaaacagacaaaaaatt 231333

>emb|AL845442.7| Mouse DNA sequence from clone RP23-392D9 on chromosome 2, complete
              sequence
          Length = 192013

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     aatggttaaacagacaaaa 54
              |||||||||||||||||||
Sbjct: 108915 aatggttaaacagacaaaa 108897


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,214,631
Number of Sequences: 3902068
Number of extensions: 1214631
Number of successful extensions: 83800
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83612
Number of HSP's gapped (non-prelim): 188
length of query: 125
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 104
effective length of database: 17,151,101,840
effective search space: 1783714591360
effective search space used: 1783714591360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)