>1A111_ARATH (Q9S9U6) 1-aminocyclopropane-1-carboxylate synthase 11 (EC|
           4.4.1.14) (ACC synthase 11) (S-adenosyl-L-methionine
           methylthioadenosine-lyase 11)
          Length = 460

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -3

Query: 250 EMDKVLSTNGFLAGISSWTRNMC*TGSKLST*KSCNCVEINYYQ 119
           ++  +L +N F A  S WT+ +C  G  +S   SC+C E  +++
Sbjct: 358 DLRHLLKSNTFEAEHSLWTKIVCEVGLNISPGSSCHCDEPGWFR 401

>RPM1_ARATH (Q39214) Disease resistance protein RPM1 (Resistance to Pseudomonas|
            syringae protein 3)
          Length = 926

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 16/49 (32%), Positives = 29/49 (59%)
 Frame = -2

Query: 413  LKEMPQGVEFLRKLEALHLESTVDDFLEKIQSEEEWEVHQSKISHIKKV 267
            L+ +P+G+E L  L+ LHL    +  +E+I+   E  V +S++ HI  +
Sbjct: 863  LEYVPRGIENLINLQELHLIHVSNQLVERIRG--EGSVDRSRVKHIPAI 909

>PRGC1_BOVIN (Q865B7) Peroxisome proliferator-activated receptor gamma|
           coactivator 1-alpha (PPAR gamma coactivator 1-alpha)
           (PPARGC-1-alpha) (PGC-1-alpha)
          Length = 796

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 302 PPILLPTESSQENHQPCSPGAMLRASGGTQHLEASPSVM 418
           PP   PTE+   +   C+          TQHL+A P+ +
Sbjct: 218 PPHTKPTENRNSSRDKCTSKKKAHTQSQTQHLQAKPTTL 256

>MURG_GLOVI (Q7MBC4) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 357

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 293 SGVPPILLPTESSQENHQPCSPGAMLRASGGTQHLEASPS 412
           +G P +L+P   + E+HQ  +  A++RA    Q  +A+ S
Sbjct: 271 TGTPSLLIPYPFAAEDHQSVNAAALVRAGAALQFSQAALS 310

>1A13_LYCES (Q42881) 1-aminocyclopropane-1-carboxylate synthase 3 (EC 4.4.1.14)|
           (ACC synthase 3) (S-adenosyl-L-methionine
           methylthioadenosine-lyase 3) (ACS-3) (Le-ACS3)
          Length = 469

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = -3

Query: 250 EMDKVLSTNGFLAGISSWTRNMC*TGSKLST*KSCNCVEINYYQFLLLVENWDT 89
           +M  +LS+N F A +  W + +   G  +S   SC+C E  +++      + DT
Sbjct: 363 DMRHLLSSNNFDAEMDLWKKIVYDVGLNISPGSSCHCTEPGWFRVCFANMSEDT 416

>YCF2_ADICA (Q85B60) Protein ycf2|
          Length = 2104

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 368  ALHLE-STVDDFLEKIQSEEEWEVHQSKISHIK 273
            ALH + STV D   +++S  EWE+   K++ +K
Sbjct: 1607 ALHRQHSTVSDMGNEMESNSEWEISSYKMAEVK 1639

>RP8L3_ARATH (Q9FJB5) Probable disease resistance RPP8-like protein 3|
          Length = 901

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = -2

Query: 413 LKEMPQGVEFLRKLEALHLESTVDDFLEKIQSEEEWEVHQSKISHIKKV 267
           L+E+P G++++  L+ L +E    ++ EK+  E+ +     K+ HI  V
Sbjct: 847 LEELPDGLKYVTSLKELKIEGMKREWKEKLVGEDYY-----KVQHIPDV 890

>SYE_PROMA (Q7VDB2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 476

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 330 LKKIINRALQVQCFELPEELNTLR 401
           +K +IN+ L  +CF   EEL T+R
Sbjct: 86  IKSLINKGLAYRCFATEEELQTMR 109

>NUCL_CHICK (P15771) Nucleolin (Protein C23)|
          Length = 694

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -3

Query: 334 LRRFSRKKNGRYTRARLVTSRRF----MLVFQEMDKVLSTNG 221
           ++ F  KKN + +  R+ +S+RF     L  ++MDK L  NG
Sbjct: 301 IKEFFGKKNLQVSEVRIGSSKRFGYVDFLSAEDMDKALQLNG 342

>MURG_THEMA (Q9WY74) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 339

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 296 GVPPILLPTESSQENHQ 346
           GVP IL+P ESS E+HQ
Sbjct: 264 GVPGILIPWESSAESHQ 280

>NEOR_STRCY (P14501) Neomycin resistance protein|
          Length = 437

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 321 VGRRMGGTPEQD*SHQEGLCWFFRKWIKY 235
           +G  MGG PE++ +    L W   +W +Y
Sbjct: 273 IGDLMGGVPEEEAAGHGSLAWGLDRWAEY 301


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,900,963
Number of Sequences: 219361
Number of extensions: 1132472
Number of successful extensions: 2346
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2346
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)