ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482249.1| Oryza sativa (japonica cultivar-group), mRNA 254 2e-64
2dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 2e-64
3dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
4dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
5dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
6dbj|AK105074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
7ref|XM_450614.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.42
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
9dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
10dbj|AK068165.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.42
11ref|NM_012722.1| Rattus norvegicus elastin (Eln), mRNA 42 1.6
12gb|BC085910.1| Rattus norvegicus elastin, mRNA (cDNA clone MGC:9... 42 1.6
13gb|AY658794.1| Synthetic construct Peudomonas aeruginosa clone F... 42 1.6
14gb|BC034057.1| Mus musculus elastin, mRNA (cDNA clone IMAGE:4038... 42 1.6
15gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone R... 42 1.6
16emb|CR652536.2|CNS0F2GU Tetraodon nigroviridis full-length cDNA 42 1.6
17emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chro... 42 1.6
18gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.6
19ref|NM_007925.2| Mus musculus elastin (Eln), mRNA 42 1.6
20dbj|AK080277.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.6
21dbj|AK041860.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 42 1.6
22gb|AE004659.1| Pseudomonas aeruginosa PAO1, section 220 of 529 o... 42 1.6
23gb|AF289665.1|AF289665 Mus musculus EIF4H gene, partial cds; LIM... 42 1.6
24gb|M86366.1|RATTREL05 Rattus norvegicus tropoelastin (tropoelast... 42 1.6
25gb|BC051649.1| Mus musculus elastin, mRNA (cDNA clone MGC:51697 ... 42 1.6
26gb|U08210.1|MMU08210 Mus musculus tropoelastin mRNA, complete cds 42 1.6
27gb|M60647.1|RATTREA Rat tropoelastin mRNA, 3' end 42 1.6
28gb|AY845858.1| Homo sapiens KCR1 (ALG10) mRNA, complete cds 40 6.5
29gb|AY330945.1| Badis corycaeus isolate B276 cytochrome b (cytb) ... 40 6.5
30gb|AY330944.1| Badis corycaeus isolate B274 cytochrome b (cytb) ... 40 6.5
31gb|AY330943.1| Badis corycaeus isolate B272 cytochrome b (cytb) ... 40 6.5
32gb|AY330942.1| Badis corycaeus isolate B244 cytochrome b (cytb) ... 40 6.5
33ref|XM_953845.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
34ref|XM_330348.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
35ref|NM_001013620.2| Homo sapiens asparagine-linked glycosylation... 40 6.5
36gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 6.5
37ref|XM_842704.1| Leishmania major strain Friedlin protein kinase... 40 6.5
38emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in l... 40 6.5
39ref|XM_798984.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 6.5
40emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3 40 6.5
41emb|AJ547622.1|BOL547622 Bactrocera oleae mRNA for male-specific... 40 6.5
42emb|AJ547621.1|BOL547621 Bactrocera oleae mRNA for female-specif... 40 6.5
43gb|AC117372.2| Homo sapiens 12 BAC RP11-266O15 (Roswell Park Can... 40 6.5
44emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in... 40 6.5
45gb|AF116684.1|AF116684 Homo sapiens PRO2037 mRNA, complete cds 40 6.5
46emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in ... 40 6.5
47gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, comple... 40 6.5
48gb|AF029676.1|AF029676 Bactrocera tryoni male-specific doublesex... 40 6.5
49gb|AF029675.1|AF029675 Bactrocera tryoni female-specific doubles... 40 6.5
50ref|XM_321492.2| Anopheles gambiae str. PEST ENSANGP00000017379 ... 40 6.5
51ref|XM_307376.2| Anopheles gambiae str. PEST ENSANGP00000013737 ... 40 6.5
52gb|AC149320.2| Phakopsora pachyrhizi clone JGIAFNA-101K18, compl... 40 6.5
53emb|BX664610.10| Zebrafish DNA sequence from clone DKEY-11N6 in ... 40 6.5
54emb|CR392001.6| Zebrafish DNA sequence from clone DKEY-70B24 in ... 40 6.5
55gb|AC149384.2| Phakopsora pachyrhizi clone JGIAFNA-5B10, complet... 40 6.5 
>ref|XM_482249.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2685

 Score =  254 bits (128), Expect = 2e-64
 Identities = 182/200 (91%)
 Strand = Plus / Minus

                                                                        
Query: 280  aagaactgggaaacctcagcagctttctcctcggaggtgaacggtgaaacggtagaatta 339
            ||||||| |||||| |||||||| |||||||| | ||||||| ||||||| ||||| || 
Sbjct: 2540 aagaactcggaaacttcagcagccttctcctctgtggtgaaccgtgaaacagtagatttg 2481

                                                                        
Query: 340  acgaagtccgatatgagtgagcttgatggccaagtcttgacgacgtgatcccagttatcc 399
            |||||||||||||||||||| ||||||||||| ||||| | ||| ||||||||||| |||
Sbjct: 2480 acgaagtccgatatgagtgaacttgatggccaggtcttcaagacatgatcccagttttcc 2421

                                                                        
Query: 400  ttcagccaggcccatgcagcttctcgtccttctaagctaataccaccaaggacataaaat 459
            |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2420 ttcaaccaggcccatgcaacttctcgtccttctaagctgataccaccaaggacataaaat 2361

                                
Query: 460  gcatcttgattccgtacctc 479
            ||||||||||||||||||||
Sbjct: 2360 gcatcttgattccgtacctc 2341



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  tgagcaaggctgggctcgctcttgatgctgtcgacccatctagcgctgatccgcaccccc 228
            ||||||||| | ||||||||| ||||||| |||| |||||| |||||||| || |||| |
Sbjct: 2651 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 2592

                            
Query: 229  tcgaggctctgcttca 244
            ||||||||||||||||
Sbjct: 2591 tcgaggctctgcttca 2576
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>dbj|AK120068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N11, full
            insert sequence
          Length = 2975

 Score =  254 bits (128), Expect = 2e-64
 Identities = 182/200 (91%)
 Strand = Plus / Minus

                                                                        
Query: 280  aagaactgggaaacctcagcagctttctcctcggaggtgaacggtgaaacggtagaatta 339
            ||||||| |||||| |||||||| |||||||| | ||||||| ||||||| ||||| || 
Sbjct: 2582 aagaactcggaaacttcagcagccttctcctctgtggtgaaccgtgaaacagtagatttg 2523

                                                                        
Query: 340  acgaagtccgatatgagtgagcttgatggccaagtcttgacgacgtgatcccagttatcc 399
            |||||||||||||||||||| ||||||||||| ||||| | ||| ||||||||||| |||
Sbjct: 2522 acgaagtccgatatgagtgaacttgatggccaggtcttcaagacatgatcccagttttcc 2463

                                                                        
Query: 400  ttcagccaggcccatgcagcttctcgtccttctaagctaataccaccaaggacataaaat 459
            |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2462 ttcaaccaggcccatgcaacttctcgtccttctaagctgataccaccaaggacataaaat 2403

                                
Query: 460  gcatcttgattccgtacctc 479
            ||||||||||||||||||||
Sbjct: 2402 gcatcttgattccgtacctc 2383



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                        
Query: 169  tgagcaaggctgggctcgctcttgatgctgtcgacccatctagcgctgatccgcaccccc 228
            ||||||||| | ||||||||| ||||||| |||| |||||| |||||||| || |||| |
Sbjct: 2693 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 2634

                            
Query: 229  tcgaggctctgcttca 244
            ||||||||||||||||
Sbjct: 2633 tcgaggctctgcttca 2618
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                            
Query: 398      ccttcagccaggcccatgcagcttctcgtccttctaagctaataccaccaaggacataaa 457
                |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 19022604 ccttcaaccaggcccatgcaacttctcgtccttctaagctgataccaccaaggacataaa 19022545

                                     
Query: 458      atgcatcttgattccgtacct 478
                |||||||||||||||||||||
Sbjct: 19022544 atgcatcttgattccgtacct 19022524



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 74/84 (88%), Gaps = 3/84 (3%)
 Strand = Plus / Minus

                                                                            
Query: 398      ccttcagccaggcccatgcagcttctcgtccttctaagcta---ataccaccaaggacat 454
                |||||| ||||||||||||  ||||||||||||||||||||   |||||||| |||||| 
Sbjct: 19046820 ccttcaaccaggcccatgccacttctcgtccttctaagctaattataccacccaggacaa 19046761

                                        
Query: 455      aaaatgcatcttgattccgtacct 478
                ||||| ||||||||||| ||||||
Sbjct: 19046760 aaaatacatcttgattctgtacct 19046737



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                            
Query: 323      gtgaaacggtagaattaacgaagtccgatatgagtgagcttgatggccaagtcttgacga 382
                ||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct: 19023812 gtgaaacagtagatttgacgaagtccgatatgagtgaacttgatggccaggtcttcaaga 19023753

                                  
Query: 383      cgtgatcccagttatcct 400
                | ||||||||||| ||||
Sbjct: 19023752 catgatcccagttttcct 19023735



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                            
Query: 169      tgagcaaggctgggctcgctcttgatgctgtcgacccatctagcgctgatccgcaccccc 228
                ||||||||| | ||||||||| ||||||| |||| |||||| |||||||| || |||| |
Sbjct: 19024048 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 19023989

                                
Query: 229      tcgaggctctgcttca 244
                ||||||||||||||||
Sbjct: 19023988 tcgaggctctgcttca 19023973



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 409      gcccatgcagcttctcgtccttctaagctaataccaccaaggacataaaatgcatcttga 468
                ||||||||| ||||||   |||||||  || |||||||| ||||||||||||||||||||
Sbjct: 19067508 gcccatgcaacttctcaaacttctaatatactaccaccatggacataaaatgcatcttga 19067449

                          
Query: 469      ttccgtacct 478
                ||||||||||
Sbjct: 19067448 ttccgtacct 19067439



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 398      ccttcagccaggcccatgcagcttctcgtccttctaagctaat 440
                |||||| ||||||||||| | ||||| ||||||||||||||||
Sbjct: 19039452 ccttcaaccaggcccatgtaacttcttgtccttctaagctaat 19039410
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>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1198_B10
          Length = 119768

 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                          
Query: 398    ccttcagccaggcccatgcagcttctcgtccttctaagctaataccaccaaggacataaa 457
              |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 107524 ccttcaaccaggcccatgcaacttctcgtccttctaagctgataccaccaaggacataaa 107465

                                   
Query: 458    atgcatcttgattccgtacct 478
              |||||||||||||||||||||
Sbjct: 107464 atgcatcttgattccgtacct 107444



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                          
Query: 323    gtgaaacggtagaattaacgaagtccgatatgagtgagcttgatggccaagtcttgacga 382
              ||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct: 108732 gtgaaacagtagatttgacgaagtccgatatgagtgaacttgatggccaggtcttcaaga 108673

                                
Query: 383    cgtgatcccagttatcct 400
              | ||||||||||| ||||
Sbjct: 108672 catgatcccagttttcct 108655



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                          
Query: 169    tgagcaaggctgggctcgctcttgatgctgtcgacccatctagcgctgatccgcaccccc 228
              ||||||||| | ||||||||| ||||||| |||| |||||| |||||||| || |||| |
Sbjct: 108968 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 108909

                              
Query: 229    tcgaggctctgcttca 244
              ||||||||||||||||
Sbjct: 108908 tcgaggctctgcttca 108893
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>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1051_A08
          Length = 137583

 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                         
Query: 398   ccttcagccaggcccatgcagcttctcgtccttctaagctaataccaccaaggacataaa 457
             |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 47391 ccttcaaccaggcccatgcaacttctcgtccttctaagctgataccaccaaggacataaa 47332

                                  
Query: 458   atgcatcttgattccgtacct 478
             |||||||||||||||||||||
Sbjct: 47331 atgcatcttgattccgtacct 47311



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 74/84 (88%), Gaps = 3/84 (3%)
 Strand = Plus / Minus

                                                                         
Query: 398   ccttcagccaggcccatgcagcttctcgtccttctaagcta---ataccaccaaggacat 454
             |||||| ||||||||||||  ||||||||||||||||||||   |||||||| |||||| 
Sbjct: 71607 ccttcaaccaggcccatgccacttctcgtccttctaagctaattataccacccaggacaa 71548

                                     
Query: 455   aaaatgcatcttgattccgtacct 478
             ||||| ||||||||||| ||||||
Sbjct: 71547 aaaatacatcttgattctgtacct 71524



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 69/78 (88%)
 Strand = Plus / Minus

                                                                         
Query: 323   gtgaaacggtagaattaacgaagtccgatatgagtgagcttgatggccaagtcttgacga 382
             ||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct: 48599 gtgaaacagtagatttgacgaagtccgatatgagtgaacttgatggccaggtcttcaaga 48540

                               
Query: 383   cgtgatcccagttatcct 400
             | ||||||||||| ||||
Sbjct: 48539 catgatcccagttttcct 48522



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 169   tgagcaaggctgggctcgctcttgatgctgtcgacccatctagcgctgatccgcaccccc 228
             ||||||||| | ||||||||| ||||||| |||| |||||| |||||||| || |||| |
Sbjct: 48835 tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 48776

                             
Query: 229   tcgaggctctgcttca 244
             ||||||||||||||||
Sbjct: 48775 tcgaggctctgcttca 48760



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 409   gcccatgcagcttctcgtccttctaagctaataccaccaaggacataaaatgcatcttga 468
             ||||||||| ||||||   |||||||  || |||||||| ||||||||||||||||||||
Sbjct: 92295 gcccatgcaacttctcaaacttctaatatactaccaccatggacataaaatgcatcttga 92236

                       
Query: 469   ttccgtacct 478
             ||||||||||
Sbjct: 92235 ttccgtacct 92226



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 398   ccttcagccaggcccatgcagcttctcgtccttctaagctaat 440
             |||||| ||||||||||| | ||||| ||||||||||||||||
Sbjct: 64239 ccttcaaccaggcccatgtaacttcttgtccttctaagctaat 64197
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>dbj|AK105074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-E10, full
           insert sequence
          Length = 356

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 169 tgagcaaggctgggctcgctcttgatgctgtcgacccatctagcgctgatccgcaccccc 228
           ||||||||| | ||||||||| ||||||| |||| |||||| |||||||| || |||| |
Sbjct: 93  tgagcaaggttaggctcgctcctgatgctctcgatccatctcgcgctgatacggaccctc 34

                           
Query: 229 tcgaggctctgcttca 244
           ||||||||||||||||
Sbjct: 33  tcgaggctctgcttca 18
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>ref|XM_450614.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2984

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 215  tgatccgcaccccctcgaggctctgcttca 244
            ||||| |||||| |||||||||||||||||
Sbjct: 2537 tgatcagcaccctctcgaggctctgcttca 2508
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 215      tgatccgcaccccctcgaggctctgcttca 244
                ||||| |||||| |||||||||||||||||
Sbjct: 11797061 tgatcagcaccctctcgaggctctgcttca 11797032
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>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1506_A04
          Length = 114998

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 215   tgatccgcaccccctcgaggctctgcttca 244
             ||||| |||||| |||||||||||||||||
Sbjct: 39879 tgatcagcaccctctcgaggctctgcttca 39850
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>dbj|AK068165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134N07, full
            insert sequence
          Length = 2985

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 215  tgatccgcaccccctcgaggctctgcttca 244
            ||||| |||||| |||||||||||||||||
Sbjct: 2538 tgatcagcaccctctcgaggctctgcttca 2509
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>ref|NM_012722.1| Rattus norvegicus elastin (Eln), mRNA
          Length = 3615

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            ||||||||||||||| |||||||||
Sbjct: 1043 aactcccgcagcagctgctgctgca 1067
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>gb|BC085910.1| Rattus norvegicus elastin, mRNA (cDNA clone MGC:94768 IMAGE:7097661),
            complete cds
          Length = 3615

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            ||||||||||||||| |||||||||
Sbjct: 1043 aactcccgcagcagctgctgctgca 1067
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>gb|AY658794.1| Synthetic construct Peudomonas aeruginosa clone FLH034416.01F
           PA2329 gene, partial cds
          Length = 837

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 143 cccgcagcagcagctgctgca 163
           |||||||||||||||||||||
Sbjct: 553 cccgcagcagcagctgctgca 533
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>gb|BC034057.1| Mus musculus elastin, mRNA (cDNA clone IMAGE:4038838), with
           apparent retained intron
          Length = 3114

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 139 aactcccgcagcagcagctgctgca 163
           |||||| ||||||||||||||||||
Sbjct: 615 aactcctgcagcagcagctgctgca 639
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>gb|AC091250.2| Mus musculus strain C57BL6/J chromosome 5 clone RP23-315E2, complete
             sequence
          Length = 201395

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 139   aactcccgcagcagcagctgctgca 163
             |||||| ||||||||||||||||||
Sbjct: 63372 aactcctgcagcagcagctgctgca 63348
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>emb|CR652536.2|CNS0F2GU Tetraodon nigroviridis full-length cDNA
          Length = 1135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 143  cccgcagcagcagctgctgca 163
            |||||||||||||||||||||
Sbjct: 1032 cccgcagcagcagctgctgca 1012
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>emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chromosome 1 Contains three
              novel genes, a novel gene (MGC45873), a novel gene
              (DKFZP564C186), a novel gene, a novel gene (DKFZP434H2010),
              a novel gene (MGC13275), the gene for bHLH factor Hes4
              (Hes4), a ribosomal protein L39 (RPL39) pseudogene, a novel
              gene, the G1P2 gene for interferon alpha-inducible protein
              (clone IFI-15K), the AGRN gene for agrin, two novel genes
              and fifteen CpG islands, complete sequence
          Length = 186759

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 402    cagccaggcccatgcagcttc 422
              |||||||||||||||||||||
Sbjct: 150312 cagccaggcccatgcagcttc 150332
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>gb|AC091537.2| Rattus norvegicus strain Brown Norway clone RP31-78C13, complete
             sequence
          Length = 119664

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 139   aactcccgcagcagcagctgctgca 163
             ||||||||||||||| |||||||||
Sbjct: 54187 aactcccgcagcagctgctgctgca 54163
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>ref|NM_007925.2| Mus musculus elastin (Eln), mRNA
          Length = 3782

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            |||||| ||||||||||||||||||
Sbjct: 1079 aactcctgcagcagcagctgctgca 1103
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>dbj|AK080277.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630021B08 product:elastin, full insert
            sequence
          Length = 3751

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            |||||| ||||||||||||||||||
Sbjct: 1102 aactcctgcagcagcagctgctgca 1126
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>dbj|AK041860.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630042I19 product:elastin, full insert
            sequence
          Length = 3782

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            |||||| ||||||||||||||||||
Sbjct: 1079 aactcctgcagcagcagctgctgca 1103
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>gb|AE004659.1| Pseudomonas aeruginosa PAO1, section 220 of 529 of the complete
            genome
          Length = 12411

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 143  cccgcagcagcagctgctgca 163
            |||||||||||||||||||||
Sbjct: 2563 cccgcagcagcagctgctgca 2583
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>gb|AF289665.1|AF289665 Mus musculus EIF4H gene, partial cds; LIMK1 gene, complete cds; and ELN
             gene, partial cds
          Length = 107257

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 139   aactcccgcagcagcagctgctgca 163
             |||||| ||||||||||||||||||
Sbjct: 87472 aactcctgcagcagcagctgctgca 87448
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>gb|M86366.1|RATTREL05 Rattus norvegicus tropoelastin (tropoelastin) gene, exons 16; and
           17
          Length = 304

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 139 aactcccgcagcagcagctgctgca 163
           ||||||||||||||| |||||||||
Sbjct: 247 aactcccgcagcagctgctgctgca 271
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>gb|BC051649.1| Mus musculus elastin, mRNA (cDNA clone MGC:51697 IMAGE:5346255),
            complete cds
          Length = 3643

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            |||||| ||||||||||||||||||
Sbjct: 1147 aactcctgcagcagcagctgctgca 1171
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>gb|U08210.1|MMU08210 Mus musculus tropoelastin mRNA, complete cds
          Length = 2651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            |||||| ||||||||||||||||||
Sbjct: 1065 aactcctgcagcagcagctgctgca 1089
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>gb|M60647.1|RATTREA Rat tropoelastin mRNA, 3' end
          Length = 2595

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  aactcccgcagcagcagctgctgca 163
            ||||||||||||||| |||||||||
Sbjct: 1023 aactcccgcagcagctgctgctgca 1047
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>gb|AY845858.1| Homo sapiens KCR1 (ALG10) mRNA, complete cds
          Length = 1623

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  agtggcaaagaactgggaaa 292
            ||||||||||||||||||||
Sbjct: 1585 agtggcaaagaactgggaaa 1604
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>gb|AY330945.1| Badis corycaeus isolate B276 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 acctcagcagctttctcctc 311
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AY330944.1| Badis corycaeus isolate B274 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 acctcagcagctttctcctc 311
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AY330943.1| Badis corycaeus isolate B272 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 acctcagcagctttctcctc 311
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>gb|AY330942.1| Badis corycaeus isolate B244 cytochrome b (cytb) gene, complete
           cds; and tRNA-Thr gene, partial sequence; mitochondrial
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 292 acctcagcagctttctcctc 311
           ||||||||||||||||||||
Sbjct: 175 acctcagcagctttctcctc 194
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>ref|XM_953845.1| Neurospora crassa OR74A hypothetical protein (NCU09699.1) partial
            mRNA
          Length = 3837

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gcagcagcagctgctgcacc 165
            ||||||||||||||||||||
Sbjct: 3452 gcagcagcagctgctgcacc 3433
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>ref|XM_330348.1| Neurospora crassa OR74A hypothetical protein (NCU09699.1) partial
            mRNA
          Length = 3837

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gcagcagcagctgctgcacc 165
            ||||||||||||||||||||
Sbjct: 3452 gcagcagcagctgctgcacc 3433
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>ref|NM_001013620.2| Homo sapiens asparagine-linked glycosylation 10 homolog B (yeast,
            alpha-1,2-glucosyltransferase) (ALG10B), mRNA
          Length = 1763

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  agtggcaaagaactgggaaa 292
            ||||||||||||||||||||
Sbjct: 1725 agtggcaaagaactgggaaa 1744
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    gcagcagcagctgctgcacc 165
              ||||||||||||||||||||
Sbjct: 535651 gcagcagcagctgctgcacc 535670
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>ref|XM_842704.1| Leishmania major strain Friedlin protein kinase (LMJ_0774) partial
           mRNA
          Length = 1779

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 gcagcagcagctgctgcacc 165
           ||||||||||||||||||||
Sbjct: 87  gcagcagcagctgctgcacc 106
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>emb|CR450841.7| Zebrafish DNA sequence from clone DKEY-16N9 in linkage group 11, complete
              sequence
          Length = 263287

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     cagagcctttccaaaacatt 86
              ||||||||||||||||||||
Sbjct: 146376 cagagcctttccaaaacatt 146395
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>ref|XM_798984.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509337.10) partial mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                        
Query: 135  ttaaaactcc-cgcagcagcagctgctg 161
            |||||||||| |||||||||||||||||
Sbjct: 1172 ttaaaactcctcgcagcagcagctgctg 1145
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>emb|AJ439398.1|AGA439398 Anopheles gambiae BAC clone 22J3
          Length = 95527

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   gcagcagcagctgctgcacc 165
             ||||||||||||||||||||
Sbjct: 83319 gcagcagcagctgctgcacc 83300
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>emb|AJ547622.1|BOL547622 Bactrocera oleae mRNA for male-specific doublesex protein (dsx
           gene)
          Length = 2265

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccgcagcagcagctgctgca 163
           ||||||||||||||||||||
Sbjct: 859 ccgcagcagcagctgctgca 840
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>emb|AJ547621.1|BOL547621 Bactrocera oleae mRNA for female-specific doublesex protein (dsx
            gene)
          Length = 2876

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 144  ccgcagcagcagctgctgca 163
            ||||||||||||||||||||
Sbjct: 1762 ccgcagcagcagctgctgca 1743
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>gb|AC117372.2| Homo sapiens 12 BAC RP11-266O15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 165301

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    agtggcaaagaactgggaaa 292
              ||||||||||||||||||||
Sbjct: 138981 agtggcaaagaactgggaaa 139000
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>emb|BX936428.10| Zebrafish DNA sequence from clone RP71-19F19 in linkage group 5, complete
              sequence
          Length = 188618

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     ttattatgcagtcatggcac 105
              ||||||||||||||||||||
Sbjct: 154235 ttattatgcagtcatggcac 154254
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>gb|AF116684.1|AF116684 Homo sapiens PRO2037 mRNA, complete cds
          Length = 1330

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  catggcacataatctcttct 117
           ||||||||||||||||||||
Sbjct: 873 catggcacataatctcttct 854
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>emb|BX649392.6| Zebrafish DNA sequence from clone DKEY-84J12 in linkage group 5, complete
              sequence
          Length = 197352

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     ttattatgcagtcatggcac 105
              ||||||||||||||||||||
Sbjct: 102844 ttattatgcagtcatggcac 102825
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>gb|AC009953.4| Homo sapiens BAC clone RP11-193F16 from 2, complete sequence
          Length = 160810

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    catggcacataatctcttct 117
             ||||||||||||||||||||
Sbjct: 35073 catggcacataatctcttct 35092
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>gb|AF029676.1|AF029676 Bactrocera tryoni male-specific doublesex (dsx) mRNA, complete cds
          Length = 2183

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccgcagcagcagctgctgca 163
           ||||||||||||||||||||
Sbjct: 550 ccgcagcagcagctgctgca 531
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>gb|AF029675.1|AF029675 Bactrocera tryoni female-specific doublesex (dsx) mRNA, complete
           cds
          Length = 1681

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 144 ccgcagcagcagctgctgca 163
           ||||||||||||||||||||
Sbjct: 550 ccgcagcagcagctgctgca 531
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>ref|XM_321492.2| Anopheles gambiae str. PEST ENSANGP00000017379
           (ENSANGG00000014890), partial mRNA
          Length = 1341

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 gcagcagcagctgctgcacc 165
           ||||||||||||||||||||
Sbjct: 267 gcagcagcagctgctgcacc 286
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>ref|XM_307376.2| Anopheles gambiae str. PEST ENSANGP00000013737
           (ENSANGG00000011248), partial mRNA
          Length = 3474

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 gcagcagcagctgctgcacc 165
           ||||||||||||||||||||
Sbjct: 261 gcagcagcagctgctgcacc 280
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>gb|AC149320.2| Phakopsora pachyrhizi clone JGIAFNA-101K18, complete sequence
          Length = 36340

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 145  cgcagcagcagctgctgcac 164
            ||||||||||||||||||||
Sbjct: 9474 cgcagcagcagctgctgcac 9455
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>emb|BX664610.10| Zebrafish DNA sequence from clone DKEY-11N6 in linkage group 22,
             complete sequence
          Length = 206964

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    ctttccaaaacatttattat 92
             ||||||||||||||||||||
Sbjct: 31340 ctttccaaaacatttattat 31359
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>emb|CR392001.6| Zebrafish DNA sequence from clone DKEY-70B24 in linkage group 14,
             complete sequence
          Length = 182769

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   ccaccaaggacataaaatgc 461
             ||||||||||||||||||||
Sbjct: 54271 ccaccaaggacataaaatgc 54290
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>gb|AC149384.2| Phakopsora pachyrhizi clone JGIAFNA-5B10, complete sequence
          Length = 42316

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 145  cgcagcagcagctgctgcac 164
            ||||||||||||||||||||
Sbjct: 9156 cgcagcagcagctgctgcac 9175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,300,070
Number of Sequences: 3902068
Number of extensions: 4300070
Number of successful extensions: 103884
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 103693
Number of HSP's gapped (non-prelim): 184
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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