ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl44h02 |
|---|---|
| Clone Library Name | barley_pub |
>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 984 Score = 52.4 bits (124), Expect = 6e-07 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ + R RKCP C FG ND + I Sbjct: 943 LTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 983
>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 973 Score = 52.4 bits (124), Expect = 6e-07 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ + R RKCP C FG ND + I Sbjct: 932 LTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 972
>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING| finger protein 20) Length = 975 Score = 52.4 bits (124), Expect = 6e-07 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ + R RKCP C FG ND + I Sbjct: 934 LTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI 974
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 52.0 bits (123), Expect = 8e-07 Identities = 20/39 (51%), Positives = 25/39 (64%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 KC+HLFC TCI+ + R RKCP C + FG ND + I Sbjct: 790 KCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIFI 828
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 52.0 bits (123), Expect = 8e-07 Identities = 20/39 (51%), Positives = 25/39 (64%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 KC+HLFC TCI+ + R RKCP C + FG ND + I Sbjct: 799 KCYHLFCETCIKTMYDTRQRKCPKCNSNFGANDFHRIFI 837
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 51.6 bits (122), Expect = 1e-06 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ E R RKCP C FG +D V I Sbjct: 961 LTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1001
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 51.6 bits (122), Expect = 1e-06 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ E R RKCP C FG +D V I Sbjct: 960 LTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYI 1000
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 51.2 bits (121), Expect = 1e-06 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ E R RKCP C FG +D + I Sbjct: 960 LTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 51.2 bits (121), Expect = 1e-06 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ E R RKCP C FG +D + I Sbjct: 960 LTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 51.2 bits (121), Expect = 1e-06 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 +TKCFH+FC C++ E R RKCP C FG +D + I Sbjct: 960 LTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYI 1000
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 49.7 bits (117), Expect = 4e-06 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 370 ++KCFH+FC C++ E R RKCP C FG ND Sbjct: 1003 LSKCFHVFCYDCLRTRYETRQRKCPKCNCAFGAND 1037
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 48.1 bits (113), Expect = 1e-05 Identities = 19/38 (50%), Positives = 23/38 (60%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 C H+FC C Q L+ R RKCP C PF QND+ V + Sbjct: 663 CGHVFCHQCAQDRLDARLRKCPNCNKPFSQNDLLTVHL 700
>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 820 Score = 48.1 bits (113), Expect = 1e-05 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 364 I KC H FC C+++ + R RKCP CG F + D++ Sbjct: 779 IVKCMHTFCKQCLEQRIASRQRKCPACGLAFAKEDIQ 815
>BRE1_SCHPO (O74563) Ubiquitin-protein ligase bre1 (EC 6.3.2.-)| Length = 680 Score = 46.6 bits (109), Expect = 3e-05 Identities = 19/36 (52%), Positives = 24/36 (66%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 I+ C H FC CIQ+ +E R R+CP CG FG +DV Sbjct: 640 ISLCGHGFCYQCIQKRIETRQRRCPICGRGFGASDV 675
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 45.4 bits (106), Expect = 7e-05 Identities = 18/41 (43%), Positives = 23/41 (56%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 IT C H+FCS C Q L R R+CP C F ND+ + + Sbjct: 641 ITVCGHVFCSKCTQERLAARLRRCPSCNRGFSANDLLSIHL 681
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 44.7 bits (104), Expect = 1e-04 Identities = 18/41 (43%), Positives = 22/41 (53%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 I C H+FC C + L R RKCP C PF ND+ V + Sbjct: 653 IRTCGHVFCEDCCKERLAARMRKCPTCNKPFSSNDLLMVHL 693
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 44.7 bits (104), Expect = 1e-04 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 C H+FC C + L R RKCP C PF ND+ + + Sbjct: 626 CGHVFCDVCCKERLAARMRKCPTCNKPFSSNDLLSIHL 663
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 42.4 bits (98), Expect = 6e-04 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 I C H+FC C + L R RKCP C F ND+ V + Sbjct: 660 IKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTVHL 700
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 42.0 bits (97), Expect = 8e-04 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 IT C H+FC C Q L R R+CP C F ND+ + + Sbjct: 651 ITVCGHVFCLGCTQERLAARLRRCPTCNKGFSANDLLSIHL 691
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 41.6 bits (96), Expect = 0.001 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI 352 I C H+FC+ C + L R RKCP C F ND+ V + Sbjct: 603 IKTCGHVFCADCCKERLAARMRKCPTCNKGFSSNDLLVVHL 643
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 40.0 bits (92), Expect = 0.003 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREV 358 C HLFC+ C+ + R RKCP C F + DV V Sbjct: 666 CGHLFCNQCVDDRISNRMRKCPTCSRAFDKMDVMPV 701
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 39.7 bits (91), Expect = 0.004 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTPFGQND 370 C H+FC+ C+ L R RKCP C F ++D Sbjct: 670 CGHVFCNECVDNRLANRMRKCPSCNKAFDRSD 701
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 38.5 bits (88), Expect = 0.009 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T+CFH C C+QR+ + + CP C GQN V Sbjct: 747 TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYV 781
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 38.1 bits (87), Expect = 0.012 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQN 373 T+CFH C C+QR+ + + CP C GQN Sbjct: 746 TECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 778
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 36.6 bits (83), Expect = 0.034 Identities = 15/27 (55%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 IT C H FCS CIQR L ++CP C Sbjct: 40 ITGCGHTFCSLCIQRYLTNTSQRCPTC 66
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 36.6 bits (83), Expect = 0.034 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRK-----CPGCGTPFGQNDVREVKI*SPSDA 334 IT+C H FC C+ +E + K CP C P + +V ++K P DA Sbjct: 874 ITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANVLKLK--EPIDA 923
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 35.8 bits (81), Expect = 0.059 Identities = 16/50 (32%), Positives = 23/50 (46%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI*SPSDAGLD 325 IT+C H+FC CI + L+ CP C Q+D+ P + D Sbjct: 647 ITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTD 696
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 35.8 bits (81), Expect = 0.059 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 376 + KC H FC CI R L+++ + CP CG +GQ Sbjct: 177 LEKCRHSFCEGCITRALQVK-KACPMCGRFYGQ 208
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 35.8 bits (81), Expect = 0.059 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQ 376 + KC H FC CI R L+++ + CP CG +GQ Sbjct: 177 LEKCRHSFCEGCITRALQVK-KACPMCGRFYGQ 208
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 35.4 bits (80), Expect = 0.077 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVRE 361 IT C H FCS CI+ L H CP C P ++ +R+ Sbjct: 41 ITSCSHTFCSFCIRDYLR-EHPMCPACRAPEQESRLRK 77
>RAG1_MOUSE (P15919) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1040 Score = 34.7 bits (78), Expect = 0.13 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T C HLFC CI R L++ CP C P D+ Sbjct: 303 TSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDL 337
>RAG1_PIG (Q867B5) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1043 Score = 34.3 bits (77), Expect = 0.17 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T C H+FC CI R L++ CP C P D+ Sbjct: 306 TSCKHVFCRICILRCLKVMGSSCPSCHYPCFPTDL 340
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 33.9 bits (76), Expect = 0.22 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 IT C H FCS CI+R L KCP C Sbjct: 42 ITSCSHTFCSLCIRRCLS-TEGKCPAC 67
>RAG1_HUMAN (P15918) V(D)J recombination-activating protein 1 (RAG-1) (RING| finger protein 74) Length = 1043 Score = 33.9 bits (76), Expect = 0.22 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T C H+FC CI R L++ CP C P D+ Sbjct: 306 TNCKHVFCRVCILRCLKVMGSYCPSCRYPCFPTDL 340
>RAG1_RABIT (P34088) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1042 Score = 33.5 bits (75), Expect = 0.29 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T C H+FC CI R L++ CP C P D+ Sbjct: 305 TSCKHVFCRICILRCLKVMGSYCPSCQYPCFPTDL 339
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 33.5 bits (75), Expect = 0.29 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -3 Query: 463 LPPVLLNLYPEEPRATPPEVPGLRH 389 +P +L NL PEE + PP VPGL H Sbjct: 1626 VPNLLKNLSPEEEKPQPPSVPGLTH 1650
>RAG1_XENLA (Q91829) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1045 Score = 33.5 bits (75), Expect = 0.29 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T C HLFC CI + ++L CP C P D+ Sbjct: 307 TSCKHLFCRICILKYIKLMGCYCPSCKYPCFPTDL 341
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 33.1 bits (74), Expect = 0.38 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -1 Query: 477 WITKCFHLFCSTCIQRNLELRHRKCPGC 394 ++TKC H FC CI ++LE +R CP C Sbjct: 147 YMTKCGHSFCYKCIHQSLEDNNR-CPKC 173
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 33.1 bits (74), Expect = 0.38 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = -1 Query: 477 WITKCFHLFCSTCIQRNLELRHRKCPGC 394 ++TKC H FC CI ++LE +R CP C Sbjct: 149 YMTKCGHSFCYKCIHQSLEDNNR-CPKC 175
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 33.1 bits (74), Expect = 0.38 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNL--ELRHRKCPGCGTPFGQNDVRE 361 IT C H+FC CI + + E H KCP C +ND+ E Sbjct: 772 ITHCAHVFCKPCICQVIQNEQPHAKCPLC-----RNDIHE 806
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 33.1 bits (74), Expect = 0.38 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 IT C H FCS CI+R L KCP C Sbjct: 42 ITSCSHTFCSLCIRRCLS-TEGKCPTC 67
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 33.1 bits (74), Expect = 0.38 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCG 391 +TKC H FCS+C + +++ CP CG Sbjct: 183 VTKCNHYFCSSCFMKQMKV-STNCPICG 209
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 32.7 bits (73), Expect = 0.50 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I +C H FC TCI R LE ++ CP C Sbjct: 31 IVECLHSFCKTCIVRYLE-TNKYCPMC 56
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 32.7 bits (73), Expect = 0.50 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I +C H FC TCI R LE ++ CP C Sbjct: 31 IVECLHSFCKTCIVRYLE-TNKYCPMC 56
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 32.7 bits (73), Expect = 0.50 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 C HLFC +CI + + CP C P G D+ Sbjct: 325 CRHLFCRSCIAKYIYSLGPHCPACTLPCGPADL 357
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 32.3 bits (72), Expect = 0.65 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 IT+C H FC +CI R+ +R CP C Sbjct: 149 ITECLHTFCKSCIVRHFYYSNR-CPKC 174
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 32.3 bits (72), Expect = 0.65 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI*SPSDAGLDDLVV-FGTLGQ 295 T+C H +CS CI R LR +CP C T ++ ++ D L+++V+ + +L Sbjct: 42 TQCDHTYCSQCI-REFLLRDNRCPLCKTEVFESGLKR-------DPLLEEIVISYASLRP 93 Query: 294 H 292 H Sbjct: 94 H 94
>RAD5_CANAL (Q5ACX1) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1084 Score = 32.3 bits (72), Expect = 0.65 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 5/45 (11%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLEL-----RHRKCPGCGTPFGQNDVREVK 355 +T C H FC +CI +L+ + + CP C +P + + ++ Sbjct: 831 VTPCAHTFCLSCILEHLDFQKELKKEKLCPNCRSPISKYQLFRIR 875
>RAG1_CHICK (P24271) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1041 Score = 32.3 bits (72), Expect = 0.65 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDV 367 T C HLFC TCI + + CP C P D+ Sbjct: 302 TTCRHLFCRTCILSCIRVMGCYCPSCWYPCFPTDL 336
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 32.3 bits (72), Expect = 0.65 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 IT+C H FC +CI R+ +R CP C Sbjct: 148 ITECLHTFCKSCIVRHFYYSNR-CPKC 173
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 32.3 bits (72), Expect = 0.65 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 IT+C H FC +CI R+ +R CP C Sbjct: 150 ITECLHTFCKSCIVRHFYYSNR-CPKC 175
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 32.0 bits (71), Expect = 0.85 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +T C H FCS CI+R L + KCP C Sbjct: 46 LTSCNHTFCSLCIRRCLSV-DSKCPLC 71
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 32.0 bits (71), Expect = 0.85 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQN 373 +T+C H FCS CI+ L + +CP C QN Sbjct: 44 LTQCGHTFCSLCIREYLN-KESRCPLCLAELRQN 76
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 32.0 bits (71), Expect = 0.85 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +T C H FCS CI++ L+ + KCP C Sbjct: 44 LTPCGHSFCSICIRKYLQ-KESKCPLC 69
>RN125_MACFA (Q95KF1) RING finger protein 125 (EC 6.3.2.-)| Length = 231 Score = 31.6 bits (70), Expect = 1.1 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 7/67 (10%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGC-------GTPFGQNDVREVKI*SPSDAGLDDLVV 313 T+C H+FC +CI +L+ CP C G P + + +K + A D LV Sbjct: 49 TRCGHVFCRSCIATSLKNNKWTCPYCRAYLPSEGVP-ATDVAKRMKSEYKNCAECDTLVC 107 Query: 312 FGTLGQH 292 G + H Sbjct: 108 LGEMRAH 114
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 31.6 bits (70), Expect = 1.1 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +2 Query: 290 WCCPRVPNTTRSSKPASLGLQIFTSRTSFCPKGVPQPG-HFRWRSSRFLWIQVEQNRWKH 466 W NT S S LQ + R S VP PG HF W S+ WI++E+NR K Sbjct: 66 WISHYAKNTQHLSVETSY-LQHESGRISTKFDFVPSPGNHFIWYRSK--WIRIERNREKQ 122 Query: 467 LV 472 ++ Sbjct: 123 MI 124
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTC 87
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 31.2 bits (69), Expect = 1.4 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTP 385 +TKC H FC C + + + KC CG P Sbjct: 249 VTKCGHYFCMGCAAKRFQ-KSPKCYACGAP 277
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I +C H FC TCI R LE + CP C Sbjct: 31 IIECLHSFCKTCIVRYLE-TSKYCPIC 56
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTC 87
>RING1_DROME (Q9VB08) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (dRING1)| (dRING protein) (Sex comb extra protein) Length = 435 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 61 ECLHRFCSDCIVTALRSGNKECPTC 85
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 63 ECLHRFCSDCIVTALRSGNKECPTC 87
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 62 ECLHRFCSDCIVTALRSGNKECPTC 86
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = -1 Query: 474 ITKCFHLFCSTCIQR--NLELRHRKCPGC 394 IT C H+FC CI + + E H KCP C Sbjct: 766 ITHCAHVFCKPCICQVIHSEQPHAKCPLC 794
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNL--ELRHRKCPGC 394 IT C H+FC CI + + E H KCP C Sbjct: 769 ITHCAHVFCKPCICQCIQNEQPHAKCPLC 797
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 31.2 bits (69), Expect = 1.4 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FCS CI L +++CP C Sbjct: 34 ECLHRFCSDCIVTALRSGNKECPTC 58
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 30.8 bits (68), Expect = 1.9 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I C H FC CI + + RHR CP C Sbjct: 166 ILPCAHSFCQKCIDKWSD-RHRSCPVC 191
>RN125_HUMAN (Q96EQ8) RING finger protein 125 (EC 6.3.2.-) (T-cell RING| activation protein 1) (TRAC-1) Length = 231 Score = 30.8 bits (68), Expect = 1.9 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGC 394 T+C H+FC +CI +L+ CP C Sbjct: 49 TRCGHVFCRSCIATSLKNNKWTCPYC 74
>MAT1_MARGL (P51950) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) Length = 324 Score = 30.8 bits (68), Expect = 1.9 Identities = 11/37 (29%), Positives = 15/37 (40%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 364 + C H C C++ CP C TP +N R Sbjct: 24 VNVCGHTLCENCVEILFVRGSGSCPSCNTPLRRNQFR 60
>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)| Length = 509 Score = 30.8 bits (68), Expect = 1.9 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI*SPSDAGLDDLV 316 I +C H +CS CI++ L + +CP C + D+R ++ LD+LV Sbjct: 38 IPQCSHNYCSLCIRKFLSYK-TQCPTCCVAVTEPDLRNNRL-------LDELV 82
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I C H FC CI + + RHR CP C Sbjct: 166 ILPCAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I C H FC CI + + RHR CP C Sbjct: 166 ILPCAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I C H FC CI + + RHR CP C Sbjct: 166 ILPCAHSFCQKCIDKWSD-RHRNCPIC 191
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I C H FC CI + + RHR CP C Sbjct: 166 ILPCAHSFCQKCIDKWSD-RHRNCPIC 191
>MAT1_MOUSE (P51949) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) Length = 309 Score = 30.4 bits (67), Expect = 2.5 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 364 + C H C +C+ CP CGTP +++ R Sbjct: 23 VNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59
>MAT1_HUMAN (P51948) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) (Cyclin G1-interacting protein) (RING finger protein 66) Length = 309 Score = 30.4 bits (67), Expect = 2.5 Identities = 11/37 (29%), Positives = 17/37 (45%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 364 + C H C +C+ CP CGTP +++ R Sbjct: 23 VNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNFR 59
>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)| (RING finger protein 73) Length = 495 Score = 30.4 bits (67), Expect = 2.5 Identities = 17/53 (32%), Positives = 28/53 (52%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI*SPSDAGLDDLV 316 I +C H +CS CI++ L + +CP C + D++ +I LD+LV Sbjct: 38 IPQCSHNYCSLCIRKFLSYK-TQCPTCCVTVTEPDLKNNRI-------LDELV 82
>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC| 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS) Length = 650 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Frame = -1 Query: 465 CFHLFCSTCIQR-------NLELRHRKCPGCGTPFGQNDVREVKI*SPS 340 C HLFC TCIQ + +CP C F D +++ S S Sbjct: 269 CGHLFCWTCIQEHAVAATSSASTSSARCPQCRLEFQPRDPNNLRLLSTS 317
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 30.4 bits (67), Expect = 2.5 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFG 379 +T+C H FCS+C + ++ KC CG G Sbjct: 276 VTRCAHYFCSSCAIKRF-AKNSKCFACGQQTG 306
>CWC27_ASPFU (Q4WE62) Peptidyl-prolyl isomerase cwc27 (EC 5.2.1.8)| Length = 559 Score = 30.4 bits (67), Expect = 2.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 436 PEEPRATPPEVPGLRHTFRAKRRARGEDLKSQRR 335 PE P +PP+ P R + ++ RA E+LK+ R Sbjct: 308 PESPARSPPQSPPARQSILSRTRAEIENLKASMR 341
>Y645_NEIMA (Q9JVW7) UPF0168 protein NMA0645| Length = 154 Score = 30.0 bits (66), Expect = 3.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 435 QRNLELRHRKCPGCGTPFGQNDVREVKI 352 +RN R R CP CG FG + E+K+ Sbjct: 21 ERNAVRRRRHCPNCGKRFGTLETAELKM 48
>Y1816_NEIMB (Q9JXZ9) UPF0168 protein NMB1816| Length = 154 Score = 30.0 bits (66), Expect = 3.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = -1 Query: 435 QRNLELRHRKCPGCGTPFGQNDVREVKI 352 +RN R R CP CG FG + E+K+ Sbjct: 21 ERNAVRRRRHCPNCGKRFGTLETAELKM 48
>SIA7A_HUMAN (Q9NSC7) Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase| 1 (EC 2.4.99.3) (GalNAc alpha-2,6-sialyltransferase I) (ST6GalNAc I) (Sialyltransferase 7A) Length = 600 Score = 30.0 bits (66), Expect = 3.2 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = -3 Query: 433 EEPRATPPEVPGLRHTFRAKRRARGEDLKSQRRW 332 ++P+ATPP P T + +R + + KS+ RW Sbjct: 229 KKPQATPPPAPFQSPTTQRNQRLKAANFKSEPRW 262
>FGF4_CHICK (P48804) Fibroblast growth factor 4 precursor (FGF-4) (HBGF-4)| Length = 194 Score = 30.0 bits (66), Expect = 3.2 Identities = 21/49 (42%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Frame = +3 Query: 315 LPGHPSQRRWDFRSSPLARRFARKVCRSPGTSGGVARGSS---GYKLSR 452 LP P QRRWD A FAR V R P AR GYK R Sbjct: 30 LPPGPRQRRWD------AALFARSVARLPAERRDAARDGDYLLGYKRLR 72
>DTX3L_HUMAN (Q8TDB6) Protein deltex 3-like protein (B-lymphoma- and| BAL-associated protein) (Rhysin-2) (Rhysin2) Length = 740 Score = 29.6 bits (65), Expect = 4.2 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFG 379 + KC H FC+ CI + + + CP C T +G Sbjct: 574 LPKCKHEFCAPCINKAMSYK-PICPTCQTSYG 604
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 29.6 bits (65), Expect = 4.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FC+ CI L +++CP C Sbjct: 66 ECLHRFCADCIITALRSGNKECPTC 90
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 29.6 bits (65), Expect = 4.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FC+ CI L +++CP C Sbjct: 66 ECLHRFCADCIITALRSGNKECPTC 90
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 29.6 bits (65), Expect = 4.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FC+ CI L +++CP C Sbjct: 66 ECLHRFCADCIITALRSGNKECPTC 90
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 29.6 bits (65), Expect = 4.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FC+ CI L +++CP C Sbjct: 66 ECLHRFCADCIITALRSGNKECPTC 90
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 29.6 bits (65), Expect = 4.2 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -1 Query: 468 KCFHLFCSTCIQRNLELRHRKCPGC 394 +C H FC+ CI L +++CP C Sbjct: 66 ECLHRFCADCIITALRSGNKECPTC 90
>SUZ2_DROME (P25172) Protein suppressor 2 of zeste (Protein posterior sex| combs) Length = 1368 Score = 29.6 bits (65), Expect = 4.2 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVKI*SPSDAGLDDLV 316 C+H +C +CI ++L LR CP C G ++ E+ + SD L L+ Sbjct: 51 CYHTYCRSCILKHL-LRAVYCPECKAS-GGKEINELNL--KSDDTLRSLI 96
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 29.6 bits (65), Expect = 4.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +TKC H FC+ C ++ + + KCP C Sbjct: 253 VTKCKHYFCTGCALKSFQ-KSSKCPIC 278
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTP 385 C H FC CI+R LE R CP C P Sbjct: 29 CLHAFCLACIRRWLEGR-PTCPLCKAP 54
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTP 385 C H FC CI+R LE R CP C P Sbjct: 29 CLHAFCLACIRRWLEGR-PTCPLCKAP 54
>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) (Radiation sensitivity protein 18) Length = 487 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 364 +T C H FCS CI+ +L CP C F ++ +R Sbjct: 40 LTPCGHTFCSLCIRTHLN-NQPNCPLCLFEFRESLLR 75
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREV 358 IT C H FCS CI+ L + + CP C +++++ V Sbjct: 48 ITSCNHTFCSHCIREYL-IVNSHCPLCKAEQFESNLKRV 85
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -1 Query: 465 CFHLFCSTCIQ--RNLELRHRKCPGCGTPFGQNDVREV 358 C H+FC +C R + CP C PF + ++R V Sbjct: 31 CGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPV 68
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -1 Query: 465 CFHLFCSTCIQ--RNLELRHRKCPGCGTPFGQNDVREV 358 C H+FC +C R + CP C PF + ++R V Sbjct: 31 CGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKENIRPV 68
>IMD_ARTGO (Q44052) Isomalto-dextranase precursor (EC 3.2.1.94) (Glucan| 1,6-alpha-isomaltosidase) (Exo-isomaltohydrolase) Length = 641 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 20 LHYFFDIGTTQAHITTLQWCQQRQHTNVGQLVVFHG 127 + YF D+G I L W + + N+GQ+ HG Sbjct: 213 VRYFKDLGVPYLRIDFLSWYEDGRDANIGQVNAPHG 248
>CWC24_EMENI (Q5AVC5) Pre-mRNA-splicing factor cwc24| Length = 332 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +TKC H FC +C + R+RK P C Sbjct: 253 VTKCGHYFCESCALQ----RYRKNPSC 275
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 29.3 bits (64), Expect = 5.5 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +TKC H FC +C + R+RK P C Sbjct: 265 VTKCGHYFCESCALQ----RYRKNPSC 287
>WBS22_MOUSE (Q9CY21) Putative methyltransferase WBSCR22 (EC 2.1.1.-)| (Williams-Beuren syndrome chromosome region 22 protein homolog) Length = 281 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 236 PENPKLLHIYKRQAQRSGWCCPRVPNTTRSSKPASLGLQIFTSRTSFCPKGVPQ 397 PEN + L + QA R+G+ V + S+K L +F+ ++ PKG+ + Sbjct: 165 PENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGPSTSLPKGLTE 218
>METX_MYCLE (O32874) Homoserine O-acetyltransferase (EC 2.3.1.31) (Homoserine| O-trans-acetylase) (Homoserine transacetylase) (HTA) Length = 382 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +3 Query: 318 PGHPSQRRWDFRSSPLARRFARKVCRSPGTSGGVARGSSGYKLSRTGGSIW 470 PGHP+ WD+ + P A + C G RGS+G G W Sbjct: 72 PGHPTPGWWDWIAGPGAPIDTNRWCAIATNVLGGCRGSTGPSSLARDGKPW 122
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGC 394 T+C H+FCS C++ +L+ CP C Sbjct: 152 TECGHVFCSQCLRDSLK-NANTCPTC 176
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +T C H FCS CI+ L KCP C Sbjct: 39 LTPCGHTFCSLCIRGYLS-NEPKCPLC 64
>RAD50_THEAC (Q9HLR8) DNA double-strand break repair rad50 ATPase| Length = 896 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = -1 Query: 438 IQRNLELR--HRKCPGCGTPFGQNDVREVK 355 I+RN+ + H KCP CGT G R ++ Sbjct: 442 IRRNMNMLEGHNKCPVCGTDLGDEGSRRIR 471
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 28.9 bits (63), Expect = 7.2 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 5/31 (16%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRK-----CPGC 394 T+C H FC +C+ ++ +++K CP C Sbjct: 849 TRCGHPFCESCLLEYIQFQNKKGSETICPNC 879
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -1 Query: 477 WITKCFHLFCSTCIQRNLELRHRKCPGCGTPF 382 ++ +C H FC C+Q +CP C PF Sbjct: 115 YLDRCLHKFCFRCVQ-EWSKNKAECPLCKQPF 145
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 I +C H FC +C+ +L + R CP C Sbjct: 276 IVECLHSFCHSCLINHLR-KERFCPRC 301
>RTN1_PANTR (Q5IS59) Reticulon-1| Length = 776 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 436 PEEPRATPPEVPGLRHTFRAKRRARGEDLKSQRRWLG*PGS-IWYPWTTP 290 P+ + +PP PG R + R E+ RR L P S + YP T P Sbjct: 481 PKREQDSPPMKPGALDAIREETGVRAEERAPSRRGLAEPASFLDYPSTEP 530
>RTN1_HUMAN (Q16799) Reticulon-1 (Neuroendocrine-specific protein)| Length = 776 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 436 PEEPRATPPEVPGLRHTFRAKRRARGEDLKSQRRWLG*PGS-IWYPWTTP 290 P+ + +PP P R + R E+ RR L PGS + YP T P Sbjct: 481 PKREQDSPPMKPSALDAIREETGVRAEERAPSRRGLAEPGSFLDYPSTEP 530
>ACVS_CEPAC (P25464) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase| (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS) Length = 3712 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = +2 Query: 314 TTRSSKPASLGLQIFTSRTSFCPKGV 391 TT + KP+ L IFTS T+ PKGV Sbjct: 2576 TTSTQKPSDLAYVIFTSGTTGKPKGV 2601
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRH--RKCPGCGTPFGQNDVRE 361 TKC H+FC C+ + L R +CP C + ++E Sbjct: 37 TKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRSLQE 75
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/32 (34%), Positives = 16/32 (50%) Frame = -1 Query: 477 WITKCFHLFCSTCIQRNLELRHRKCPGCGTPF 382 ++ +C H FC C+Q +CP C PF Sbjct: 116 YLDRCLHKFCFRCVQ-EWSKNKAECPLCKQPF 146
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGC 394 T+C H+FCS C++ +L+ CP C Sbjct: 156 TECGHVFCSQCLRDSLK-NANTCPTC 180
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGC 394 T+C H+FCS C++ +L+ CP C Sbjct: 156 TECGHVFCSQCLRDSLK-NANTCPTC 180
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)| Length = 825 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -1 Query: 465 CFHLFCSTCIQRNLELRHRKCPGCGTP 385 C H FC C++ + LR+ CP C TP Sbjct: 144 CLHPFCIPCMKTWIPLRN-TCPLCNTP 169
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -1 Query: 465 CFHLFCSTCIQ--RNLELRHRKCPGCGTPFGQNDVREV 358 C H+FC +C R + CP C PF + ++R V Sbjct: 31 CGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPV 68
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = -1 Query: 465 CFHLFCSTCIQ--RNLELRHRKCPGCGTPFGQNDVREV 358 C H+FC +C R + CP C PF + ++R V Sbjct: 31 CGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKENIRPV 68
>CIP1_HUMAN (Q9NPC3) Cyclin B1-interacting protein 1 (EC 6.3.2.-) (Human| enhancer of invasion 10) (E3 ubiquitin-protein ligase HEI10) Length = 277 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -1 Query: 477 WITKCFHLFCSTCIQRNLELRHRKCPGC-GTPFGQNDVREVKI*SPSD 337 W+T C H+FC CP C T G+ D+ ++ SPS+ Sbjct: 24 WVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTEL-SPSE 70
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 6/69 (8%) Frame = -1 Query: 465 CFHLFCSTCIQRNLEL------RHRKCPGCGTPFGQNDVREVKI*SPSDAGLDDLVVFGT 304 C H FC C+ R E+ CP C PF R + ++ L + T Sbjct: 31 CGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVST 90 Query: 303 LGQHQPDRC 277 LG + D C Sbjct: 91 LGLGEEDVC 99
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 6/69 (8%) Frame = -1 Query: 465 CFHLFCSTCIQRNLEL------RHRKCPGCGTPFGQNDVREVKI*SPSDAGLDDLVVFGT 304 C H FC C+ R E+ CP C PF R + ++ L + T Sbjct: 31 CGHNFCRACLTRYCEIPGPDLEESPTCPLCKEPFRPGSFRPNWQLANVVENIERLQLVST 90 Query: 303 LGQHQPDRC 277 LG + D C Sbjct: 91 LGLGEEDVC 99
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREVK 355 +T C+H+F CI + LE ++ CP C N +K Sbjct: 131 LTTCYHVFHQECIDQWLE-SNKTCPVCRRNLDPNAPENIK 169
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGC 394 +T C+H+F CI E HR CP C Sbjct: 126 LTTCYHVFHQECIDLWFE-SHRTCPVC 151
>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing| protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 1) (Inverted CCAAT box-binding protein of 90 kDa) (Transcription factor ICBP90) (Nuclear zinc Length = 793 Score = 28.5 bits (62), Expect = 9.4 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = -1 Query: 471 TKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVREV 358 T C H C C+ R+ + CP C G++ +V Sbjct: 737 TVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQV 774
>MYEOV_HUMAN (Q96EZ4) Myeloma overexpressed gene protein (Oncogene in multiple| myeloma) Length = 313 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 51 RRTSPHCSGVSRDNIRMSGSWLFFTVDQRLGGHRASTIR 167 R +PHCS +R++GSWL + LGG R R Sbjct: 241 RHPTPHCSTWGLP-LRVAGSWLTVVTVEALGGWRMGVRR 278
>CSMD3_HUMAN (Q7Z407) CUB and sushi domain-containing protein 3 precursor (CUB| and sushi multiple domains protein 3) Length = 3670 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/47 (38%), Positives = 22/47 (46%) Frame = +3 Query: 297 VQGYQILPGHPSQRRWDFRSSPLARRFARKVCRSPGTSGGVARGSSG 437 V GY IL GHP + + F +CR+ GG RGSSG Sbjct: 168 VTGY-ILDGHPQLTCIANSVNTASWDFPVPICRAEDACGGTMRGSSG 213
>YNN1_CAEEL (Q03605) Hypothetical RING finger protein T02C1.1 in chromosome III| Length = 160 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCPGCGTPFGQNDVR 364 I +C H +C CI+ +L + + KCP C G N +R Sbjct: 20 IIECGHSYCRFCIESHLNI-NEKCPLCRAHTG-NPIR 54
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain| associated with RING and Traf domains protein 1) (Malignant 62) (RING finger protein 83) Length = 470 Score = 28.5 bits (62), Expect = 9.4 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELRHRKCP 400 ++ C H FC TC+Q L KCP Sbjct: 31 VSTCGHRFCDTCLQEFLSEGVFKCP 55
>BCK2_YEAST (P33306) Protein BCK2 (Bypass of kinase C protein)| Length = 851 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 327 PSQRRWDFRS-SPLARRFARKVCRSPGTSGGVARGSSGYKLSRTGGSI 467 P+QR S S ++ R++ SPG + RGSS Y+LSR S+ Sbjct: 400 PTQRTTSVGSLSSMSNRYSPIRVASPGRARSATRGSSLYRLSRDLNSL 447
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Frame = -1 Query: 474 ITKCFHLFCSTCIQRNLELR--HRKCPGCGTPFGQNDV 367 ++ C HLFC C+ + L+ R ++ CP C + N V Sbjct: 38 VSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKV 75
>RL37_METJA (P54011) 50S ribosomal protein L37e| Length = 61 Score = 28.5 bits (62), Expect = 9.4 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = -1 Query: 462 FHLFCSTCIQRNLELRHRKCPGCGTP 385 +H+ C C +R +R ++C CG P Sbjct: 16 YHIRCRRCGRRAYHVRKKRCAACGFP 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,903,275 Number of Sequences: 219361 Number of extensions: 1562985 Number of successful extensions: 5028 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 4868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5025 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
