ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC099761.8| Mus musculus BAC clone RP23-230J6 from chromosome... 38 2.5
2gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cd... 38 2.5
3emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I... 38 2.5
4emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BA... 38 2.5
5gb|AC009721.9| Homo sapiens 12q24.1-116.6-118.9 BAC RP11-129O9 (... 38 2.5
6gb|AC021909.7| Homo sapiens, clone RP11-22F19, complete sequence 38 2.5
7tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform ... 38 2.5
8emb|BX679674.3| Mouse DNA sequence from clone RP23-66H6 on chrom... 38 2.5
9gb|AC156160.4| Monodelphis domestica, clone XX-23H4, complete se... 38 2.5
10emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on ch... 38 2.5
11gb|U52867.1|HVU52867 Hordeum vulgare high affinity sulfate trans... 38 2.5
12gb|AC138292.20| Mus musculus chromosome 10, clone RP23-361K13, c... 38 2.5
13gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosom... 38 2.5
14gb|AC152889.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 36 9.7
15gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, com... 36 9.7
16gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 36 9.7
17gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome... 36 9.7
18gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome... 36 9.7
19gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome 36 9.7
20gb|AC131720.2| Mus musculus BAC clone RP23-137I3 from chromosome... 36 9.7
21emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in... 36 9.7
22ref|XM_569555.1| Cryptococcus neoformans var. neoformans JEC21 e... 36 9.7
23gb|AC122235.5| Mus musculus BAC clone RP23-139H6 from chromosome... 36 9.7
24gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete... 36 9.7
25gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's H... 36 9.7
26gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, com... 36 9.7
27gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, comp... 36 9.7
28emb|BX005305.21| Zebrafish DNA sequence from clone DKEY-29C11 in... 36 9.7
29emb|AL590392.5| Human DNA sequence from clone RP11-453D21 on chr... 36 9.7
30gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome 36 9.7
31emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chr... 36 9.7
32gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's H... 36 9.7
33emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on ch... 36 9.7
34emb|AL136301.21| Human DNA sequence from clone RP11-195L15 on ch... 36 9.7
35emb|AL133465.30| Human DNA sequence from clone RP5-1177M21 on ch... 36 9.7
36gb|AC098641.3| Genomic sequence for Mus musculus, clone RP23-258... 36 9.7
37emb|AL163191.2|SPAC140 S.pombe chromosome I cosmid c140 36 9.7
38gb|AC100839.2| Homo sapiens chromosome 15, clone RP11-625H11, co... 36 9.7
39gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, co... 36 9.7
40emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,... 36 9.7
41dbj|AK036649.1| Mus musculus adult male bone cDNA, RIKEN full-le... 36 9.7
42gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome... 36 9.7
43gb|AY273166.1| Homo sapiens polymerase (DNA directed), epsilon (... 36 9.7
44gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 36 9.7
45gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Can... 36 9.7
46gb|AC135586.8| Homo sapiens 12 BAC RP13-672B3 (Roswell Park Canc... 36 9.7
47gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101... 36 9.7
48gb|AC007853.4|AC007853 Drosophila melanogaster, chromosome 3R, r... 36 9.7
49gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome 3R, ... 36 9.7
50gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, r... 36 9.7
51gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, co... 36 9.7
52ref|XM_576103.1| PREDICTED: Rattus norvegicus ankyrin repeat dom... 36 9.7
53dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge... 36 9.7
54gb|AF119676.1|AF119676 Mus musculus small GTP-binding protein RA... 36 9.7
55dbj|AK173603.1| Ciona intestinalis cDNA, clone:cieg002g03, full ... 36 9.7
56emb|AL935180.9| Zebrafish DNA sequence from clone CH211-227I1, c... 36 9.7
57gb|AE003750.2| Drosophila melanogaster chromosome 3R, section 88... 36 9.7
58gb|AE003691.4| Drosophila melanogaster chromosome 3R, section 29... 36 9.7
59gb|BC079192.1| Rattus norvegicus ankyrin repeat domain 9, mRNA (... 36 9.7
60gb|BC061827.1| Rattus norvegicus ankyrin repeat domain 9, mRNA (... 36 9.7
61gb|U63544.1|MMNKTR1 Mus musculus natural killer tumor recognitio... 36 9.7
62emb|AL954655.9| Zebrafish DNA sequence from clone CH211-226H7, c... 36 9.7
63ref|NM_001012112.1| Rattus norvegicus ankyrin repeat domain 9 (A... 36 9.7
64gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, comple... 36 9.7
65emb|AL929544.7| Zebrafish DNA sequence from clone CH211-227O19, ... 36 9.7
66emb|AL672038.7| Mouse DNA sequence from clone RP23-317H19 on chr... 36 9.7
67emb|AL593850.10| Mouse DNA sequence from clone RP23-436B15 on ch... 36 9.7 
>gb|AC099761.8| Mus musculus BAC clone RP23-230J6 from chromosome 10, complete sequence
          Length = 182574

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    tgccaagaagaataaaaac 44
             |||||||||||||||||||
Sbjct: 61901 tgccaagaagaataaaaac 61919
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>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      atcacaacaatgcctgagg 23
              |||||||||||||||||||
Sbjct: 705265 atcacaacaatgcctgagg 705283
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>emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I10 on chromosome 6q16.1-16.3
             Contains a novel gene, complete sequence
          Length = 160750

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 24    tttgccaagaagaataaaaacaa 46
             ||||| |||||||||||||||||
Sbjct: 58921 tttgcaaagaagaataaaaacaa 58943
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>emb|AL049711.3|ATF4F15 Arabidopsis thaliana DNA chromosome 3, BAC clone F4F15
          Length = 123209

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 29    caagaagaataaaaacaac 47
             |||||||||||||||||||
Sbjct: 26158 caagaagaataaaaacaac 26140
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>gb|AC009721.9| Homo sapiens 12q24.1-116.6-118.9 BAC RP11-129O9 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 166765

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    ccaagaagaataaaaacaa 46
             |||||||||||||||||||
Sbjct: 42002 ccaagaagaataaaaacaa 42020
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>gb|AC021909.7| Homo sapiens, clone RP11-22F19, complete sequence
          Length = 178621

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      atcacaacaatgcctgagg 23
              |||||||||||||||||||
Sbjct: 169438 atcacaacaatgcctgagg 169456
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>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene,
              alternatively spliced, complete cds
          Length = 1421559

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      atcacaacaatgcctgagg 23
              |||||||||||||||||||
Sbjct: 705265 atcacaacaatgcctgagg 705283
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>emb|BX679674.3| Mouse DNA sequence from clone RP23-66H6 on chromosome X, complete
             sequence
          Length = 205905

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    ttgccaagaagaataaaaa 43
             |||||||||||||||||||
Sbjct: 71128 ttgccaagaagaataaaaa 71110
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>gb|AC156160.4| Monodelphis domestica, clone XX-23H4, complete sequence
          Length = 143400

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    ccaagaagaataaaaacaa 46
             |||||||||||||||||||
Sbjct: 44734 ccaagaagaataaaaacaa 44716
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>emb|AL929449.14| Mouse DNA sequence from clone RP23-279D23 on chromosome 2, complete
              sequence
          Length = 146396

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     ccaagaagaataaaaacaa 46
              |||||||||||||||||||
Sbjct: 122725 ccaagaagaataaaaacaa 122743
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>gb|U52867.1|HVU52867 Hordeum vulgare high affinity sulfate transporter HVST1 mRNA,
           complete cds
          Length = 2456

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 25  ttgccaagaagaataaaaa 43
           |||||||||||||||||||
Sbjct: 964 ttgccaagaagaataaaaa 982
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>gb|AC138292.20| Mus musculus chromosome 10, clone RP23-361K13, complete sequence
          Length = 166235

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 26     tgccaagaagaataaaaac 44
              |||||||||||||||||||
Sbjct: 118278 tgccaagaagaataaaaac 118296
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>gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosome 14, complete sequence
          Length = 196017

 Score = 38.2 bits (19), Expect = 2.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     ccaagaagaataaaaacaa 46
              |||||||||||||||||||
Sbjct: 147546 ccaagaagaataaaaacaa 147564
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>gb|AC152889.1| Ornithorhynchus anatinus chromosome UNK clone OABb-513A1, complete
            sequence
          Length = 115833

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 30   aagaagaataaaaacaac 47
            ||||||||||||||||||
Sbjct: 2699 aagaagaataaaaacaac 2716
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>gb|AC163274.5| Mus musculus chromosome 1, clone RP23-202P19, complete sequence
          Length = 208546

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    caagaagaataaaaacaa 46
             ||||||||||||||||||
Sbjct: 43740 caagaagaataaaaacaa 43757
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
              sequence
          Length = 2105742

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 509312 caagaagaataaaaacaa 509295
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>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete
            sequence
          Length = 168537

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 25   ttgccaagaagaataaaa 42
            ||||||||||||||||||
Sbjct: 8219 ttgccaagaagaataaaa 8202
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>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence
          Length = 194427

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 25     ttgccaagaagaataaaa 42
              ||||||||||||||||||
Sbjct: 181490 ttgccaagaagaataaaa 181473
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>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                        
Query: 19     tgaggtttgccaagaagaataaaaac 44
              |||||||||||||| |||| ||||||
Sbjct: 390374 tgaggtttgccaagtagaacaaaaac 390399
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>gb|AC131720.2| Mus musculus BAC clone RP23-137I3 from chromosome 10, complete sequence
          Length = 207949

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 115417 caagaagaataaaaacaa 115400
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>emb|BX936312.12| Zebrafish DNA sequence from clone DKEY-204O5 in linkage group 7, complete
              sequence
          Length = 158510

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 30     aagaagaataaaaacaac 47
              ||||||||||||||||||
Sbjct: 119236 aagaagaataaaaacaac 119253
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>ref|XM_569555.1| Cryptococcus neoformans var. neoformans JEC21 eukaryotic
           translation initiation factor 3 62 kda subunit
           (CNC01870) partial mRNA
          Length = 1768

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 29  caagaagaataaaaacaa 46
           ||||||||||||||||||
Sbjct: 517 caagaagaataaaaacaa 534
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>gb|AC122235.5| Mus musculus BAC clone RP23-139H6 from chromosome 12, complete sequence
          Length = 190293

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 107395 caagaagaataaaaacaa 107412
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>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence
          Length = 173131

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 26    tgccaagaagaataaaaa 43
             ||||||||||||||||||
Sbjct: 42990 tgccaagaagaataaaaa 43007
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>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 184149

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 147997 caagaagaataaaaacaa 147980
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>gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, complete sequence
          Length = 198442

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 28    ccaagaagaataaaaaca 45
             ||||||||||||||||||
Sbjct: 98309 ccaagaagaataaaaaca 98292
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>gb|AC157555.9| Mus musculus chromosome 5, clone RP24-221I6, complete sequence
          Length = 149599

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 29    caagaagaataaaaacaa 46
             ||||||||||||||||||
Sbjct: 12833 caagaagaataaaaacaa 12850
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>emb|BX005305.21| Zebrafish DNA sequence from clone DKEY-29C11 in linkage group 12,
              complete sequence
          Length = 149401

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 27     gccaagaagaataaaaac 44
              ||||||||||||||||||
Sbjct: 147049 gccaagaagaataaaaac 147032
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>emb|AL590392.5| Human DNA sequence from clone RP11-453D21 on chromosome 6, complete
             sequence
          Length = 104011

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 8     acaacaatgcctgaggtttgccaaga 33
             ||||||||||||||| || |||||||
Sbjct: 58196 acaacaatgcctgagattggccaaga 58171
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>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 30     aagaagaataaaaacaac 47
              ||||||||||||||||||
Sbjct: 285598 aagaagaataaaaacaac 285615
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>emb|AL445240.8| Human DNA sequence from clone RP11-242A15 on chromosome 10 Contains the
              5' end of a novel gene, complete sequence
          Length = 152898

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 26     tgccaagaagaataaaaa 43
              ||||||||||||||||||
Sbjct: 118568 tgccaagaagaataaaaa 118551
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>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227849

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 177754 caagaagaataaaaacaa 177771
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>emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on chromosome 13 Contains the
             5' end of a novel gene (FLJ32909), complete sequence
          Length = 158460

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 24    tttgccaagaagaataaa 41
             ||||||||||||||||||
Sbjct: 51332 tttgccaagaagaataaa 51315
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>emb|AL136301.21| Human DNA sequence from clone RP11-195L15 on chromosome 13 Contains
            the 5' end of the KPNA3 gene for karyopherin alpha 3
            (importin alpha 4), a novel gene and two CpG islands,
            complete sequence
          Length = 48730

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 29   caagaagaataaaaacaa 46
            ||||||||||||||||||
Sbjct: 8292 caagaagaataaaaacaa 8309
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>emb|AL133465.30| Human DNA sequence from clone RP5-1177M21 on chromosome 20 Contains a
             putative novel gene, ESTs, STSs, GSSs and a CpG island,
             complete sequence
          Length = 88058

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 28    ccaagaagaataaaaaca 45
             ||||||||||||||||||
Sbjct: 86275 ccaagaagaataaaaaca 86292
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>gb|AC098641.3| Genomic sequence for Mus musculus, clone RP23-258H17, from chromosome
             17, complete sequence
          Length = 78373

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     acaacaatgcctgaggtt 25
             ||||||||||||||||||
Sbjct: 46860 acaacaatgcctgaggtt 46877
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>emb|AL163191.2|SPAC140 S.pombe chromosome I cosmid c140
          Length = 15326

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 29   caagaagaataaaaacaacgga 50
            ||||||||||||||| ||||||
Sbjct: 9523 caagaagaataaaaaaaacgga 9544
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>gb|AC100839.2| Homo sapiens chromosome 15, clone RP11-625H11, complete sequence
          Length = 161309

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 30     aagaagaataaaaacaacggag 51
              ||||||||||||||||| ||||
Sbjct: 136340 aagaagaataaaaacaaaggag 136361
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>gb|AC011927.11| Homo sapiens chromosome 15, clone RP11-15O14, complete sequence
          Length = 162662

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 30    aagaagaataaaaacaacggag 51
             ||||||||||||||||| ||||
Sbjct: 12224 aagaagaataaaaacaaaggag 12245
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>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 30    aagaagaataaaaacaac 47
             ||||||||||||||||||
Sbjct: 50375 aagaagaataaaaacaac 50392
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>dbj|AK036649.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830145L13 product:natural killer tumor
            recognition sequence, full insert sequence
          Length = 2550

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 25   ttgccaagaagaataaaa 42
            ||||||||||||||||||
Sbjct: 1073 ttgccaagaagaataaaa 1090
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>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence
          Length = 168628

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    tgccaagaagaataaaaa 43
             ||||||||||||||||||
Sbjct: 84559 tgccaagaagaataaaaa 84542
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>gb|AY273166.1| Homo sapiens polymerase (DNA directed), epsilon (POLE1) gene, partial
            cds
          Length = 58992

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 26   tgccaagaagaataaaaa 43
            ||||||||||||||||||
Sbjct: 7959 tgccaagaagaataaaaa 7942
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                 
Query: 30      aagaagaataaaaacaac 47
               ||||||||||||||||||
Sbjct: 2308866 aagaagaataaaaacaac 2308849
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>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160039

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 26     tgccaagaagaataaaaa 43
              ||||||||||||||||||
Sbjct: 158147 tgccaagaagaataaaaa 158164
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>gb|AC135586.8| Homo sapiens 12 BAC RP13-672B3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 74913

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 26    tgccaagaagaataaaaa 43
             ||||||||||||||||||
Sbjct: 74805 tgccaagaagaataaaaa 74788
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>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map
             15q21.1, complete sequence
          Length = 185145

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 30    aagaagaataaaaacaac 47
             ||||||||||||||||||
Sbjct: 44693 aagaagaataaaaacaac 44676
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>gb|AC007853.4|AC007853 Drosophila melanogaster, chromosome 3R, region 96B-96C, BAC clone
             BACR03L02, complete sequence
          Length = 162921

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 48    ggagggccggagggaaca 65
             ||||||||||||||||||
Sbjct: 37254 ggagggccggagggaaca 37237
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>gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome 3R, region 96B-96B, BAC clone
              BACR03I15, complete sequence
          Length = 181132

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 48     ggagggccggagggaaca 65
              ||||||||||||||||||
Sbjct: 100586 ggagggccggagggaaca 100569
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>gb|AC007709.4|AC007709 Drosophila melanogaster, chromosome 3R, region 86E-86E, BAC clone
             BACR13P08, complete sequence
          Length = 169707

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 30    aagaagaataaaaacaac 47
             ||||||||||||||||||
Sbjct: 97398 aagaagaataaaaacaac 97415
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>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence
          Length = 174941

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 24    tttgccaagaagaataaaaaca 45
             ||||||||||| ||||||||||
Sbjct: 62509 tttgccaagaataataaaaaca 62530
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>ref|XM_576103.1| PREDICTED: Rattus norvegicus ankyrin repeat domain 9 (predicted)
           (Ankrd9_predicted), mRNA
          Length = 1366

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 44  caacggagggccggaggg 61
           ||||||||||||||||||
Sbjct: 329 caacggagggccggaggg 346
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>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome
          Length = 3031430

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                     
Query: 12      caatgcctgaggtttgccaaga 33
               ||||||||||||| ||||||||
Sbjct: 2542061 caatgcctgaggtatgccaaga 2542082
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>gb|AF119676.1|AF119676 Mus musculus small GTP-binding protein RAB25 (Rab25) gene, complete
            cds
          Length = 9018

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 7    cacaacaatgcctgaggt 24
            ||||||||||||||||||
Sbjct: 3894 cacaacaatgcctgaggt 3877
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>dbj|AK173603.1| Ciona intestinalis cDNA, clone:cieg002g03, full insert sequence
          Length = 1327

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 29   caagaagaataaaaacaa 46
            ||||||||||||||||||
Sbjct: 1167 caagaagaataaaaacaa 1150
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>emb|AL935180.9| Zebrafish DNA sequence from clone CH211-227I1, complete sequence
          Length = 159007

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 30    aagaagaataaaaacaac 47
             ||||||||||||||||||
Sbjct: 92584 aagaagaataaaaacaac 92601
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>gb|AE003750.2| Drosophila melanogaster chromosome 3R, section 88 of 118 of the
             complete sequence
          Length = 227219

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 48    ggagggccggagggaaca 65
             ||||||||||||||||||
Sbjct: 59773 ggagggccggagggaaca 59756
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>gb|AE003691.4| Drosophila melanogaster chromosome 3R, section 29 of 118 of the complete
              sequence
          Length = 266829

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 30     aagaagaataaaaacaac 47
              ||||||||||||||||||
Sbjct: 221344 aagaagaataaaaacaac 221361
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>gb|BC079192.1| Rattus norvegicus ankyrin repeat domain 9, mRNA (cDNA clone
           MGC:94242 IMAGE:7131342), complete cds
          Length = 1481

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 44  caacggagggccggaggg 61
           ||||||||||||||||||
Sbjct: 416 caacggagggccggaggg 433
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>gb|BC061827.1| Rattus norvegicus ankyrin repeat domain 9, mRNA (cDNA clone
           MGC:72596 IMAGE:5599008), complete cds
          Length = 1275

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 44  caacggagggccggaggg 61
           ||||||||||||||||||
Sbjct: 199 caacggagggccggaggg 216
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>gb|U63544.1|MMNKTR1 Mus musculus natural killer tumor recognition protein (Nktr) gene,
            exons 1, 2, 3, 4 and 5
          Length = 15440

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 25   ttgccaagaagaataaaa 42
            ||||||||||||||||||
Sbjct: 9103 ttgccaagaagaataaaa 9120
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>emb|AL954655.9| Zebrafish DNA sequence from clone CH211-226H7, complete sequence
          Length = 207351

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     gccaagaagaataaaaac 44
              ||||||||||||||||||
Sbjct: 186627 gccaagaagaataaaaac 186644



 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 25     ttgccaagaagaataaaa 42
              ||||||||||||||||||
Sbjct: 107972 ttgccaagaagaataaaa 107989
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>ref|NM_001012112.1| Rattus norvegicus ankyrin repeat domain 9 (Ankrd9), mRNA
          Length = 1481

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 44  caacggagggccggaggg 61
           ||||||||||||||||||
Sbjct: 416 caacggagggccggaggg 433
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>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence
          Length = 217058

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 7      cacaacaatgcctgaggt 24
              ||||||||||||||||||
Sbjct: 112282 cacaacaatgcctgaggt 112299
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>emb|AL929544.7| Zebrafish DNA sequence from clone CH211-227O19, complete sequence
          Length = 109753

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 30    aagaagaataaaaacaac 47
             ||||||||||||||||||
Sbjct: 92356 aagaagaataaaaacaac 92373
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>emb|AL672038.7| Mouse DNA sequence from clone RP23-317H19 on chromosome X, complete
              sequence
          Length = 181127

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 153153 caagaagaataaaaacaa 153136
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>emb|AL593850.10| Mouse DNA sequence from clone RP23-436B15 on chromosome 1, complete
              sequence
          Length = 197663

 Score = 36.2 bits (18), Expect = 9.7
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 29     caagaagaataaaaacaa 46
              ||||||||||||||||||
Sbjct: 187612 caagaagaataaaaacaa 187629


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 776,082
Number of Sequences: 3902068
Number of extensions: 776082
Number of successful extensions: 53948
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53813
Number of HSP's gapped (non-prelim): 135
length of query: 65
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 44
effective length of database: 17,151,101,840
effective search space: 754648480960
effective search space used: 754648480960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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