ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl44g11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, complete sequence Length = 185947 Score = 42.1 bits (21), Expect = 0.047 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tatactttgttatttgatatt 31 ||||||||||||||||||||| Sbjct: 107403 tatactttgttatttgatatt 107383
>gb|AC114772.5| Homo sapiens BAC clone RP11-427H3 from 2, complete sequence Length = 163318 Score = 42.1 bits (21), Expect = 0.047 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 taaatatactttgttatttga 27 ||||||||||||||||||||| Sbjct: 46766 taaatatactttgttatttga 46746
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ataaatatactttgttattt 25 |||||||||||||||||||| Sbjct: 176399 ataaatatactttgttattt 176380
>ref|XM_713531.1| Candida albicans SC5314 acetyl-CoA carboxylase (CaO19_7466), mRNA Length = 6816 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gaagataaatatactttgtt 21 |||||||||||||||||||| Sbjct: 2035 gaagataaatatactttgtt 2054
>gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170900 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ataaatatactttgttattt 25 |||||||||||||||||||| Sbjct: 94267 ataaatatactttgttattt 94248
>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete sequence Length = 304419 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ataaatatactttgttattt 25 |||||||||||||||||||| Sbjct: 142886 ataaatatactttgttattt 142867
>gb|AY522332.4| Agrotis segetum granulovirus, complete genome Length = 131680 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 taaatatactttgttattt 25 ||||||||||||||||||| Sbjct: 91177 taaatatactttgttattt 91159
>gb|AC114904.7| Mus musculus chromosome 1, clone RP24-121J22, complete sequence Length = 156574 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aagataaatatactttgttattt 25 ||||||||||| ||||||||||| Sbjct: 141198 aagataaatattctttgttattt 141220
>gb|AC118702.8| Mus musculus chromosome 5, clone RP24-166J1, complete sequence Length = 171263 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aagataaatatactttgttattt 25 ||||||||||||||||| ||||| Sbjct: 1497 aagataaatatactttgatattt 1519
>gb|AC122738.10| Mus musculus chromosome 1, clone RP23-68E17, complete sequence Length = 164639 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aagataaatatactttgttattt 25 ||||||||||| ||||||||||| Sbjct: 46429 aagataaatattctttgttattt 46451
>gb|AC157567.6| Mus musculus chromosome 5, clone RP23-246I12, complete sequence Length = 157519 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aagataaatatactttgttattt 25 ||||||||||||||||| ||||| Sbjct: 86729 aagataaatatactttgatattt 86751
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 aaatatactttgttatttgatat 30 ||||||| ||||||||||||||| Sbjct: 51446 aaatatattttgttatttgatat 51468
>gb|AC163446.2| Mus musculus chromosome 5, clone RP23-151G22, complete sequence Length = 190466 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 3 aagataaatatactttgttattt 25 ||||||||||||||||| ||||| Sbjct: 153133 aagataaatatactttgatattt 153155
>gb|AC117995.1| Ciona savignyi, clone XX-1A5, complete sequence Length = 41110 Score = 36.2 bits (18), Expect = 2.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 8 aaatatactttgttatttgatattct 33 ||||||||||||||||| | |||||| Sbjct: 37321 aaatatactttgttattaggtattct 37296
>ref|XM_631002.1| Dictyostelium discoideum hypothetical protein (DDB0188557), partial mRNA Length = 3492 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 10 atatactttgttatttgatatt 31 ||||| |||||||||||||||| Sbjct: 2685 atatattttgttatttgatatt 2664
>gb|AC165342.4| Mus musculus BAC clone RP23-472O23 from chromosome 19, complete sequence Length = 187795 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 100924 tttgttatttgatattct 100941
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 taaatatactttgttatt 24 |||||||||||||||||| Sbjct: 22884 taaatatactttgttatt 22901
>gb|AC147174.2| Xenopus tropicalis clone CH216-51H8, complete sequence Length = 191184 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ctttgttatttgatattc 32 |||||||||||||||||| Sbjct: 106672 ctttgttatttgatattc 106689
>gb|AC148454.2| Xenopus tropicalis clone CH216-161F9, complete sequence Length = 186914 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ctttgttatttgatattc 32 |||||||||||||||||| Sbjct: 104768 ctttgttatttgatattc 104785
>gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosome 8, complete sequence Length = 154524 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 124417 tttgttatttgatattct 124400
>gb|AC147206.2| Xenopus tropicalis clone CH216-39C21, complete sequence Length = 167795 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ctttgttatttgatattc 32 |||||||||||||||||| Sbjct: 145620 ctttgttatttgatattc 145637
>gb|AC147170.3| Xenopus tropicalis clone CH216-154J22, complete sequence Length = 163973 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ctttgttatttgatattc 32 |||||||||||||||||| Sbjct: 147591 ctttgttatttgatattc 147608
>gb|AC131758.3| Mus musculus BAC clone RP24-211E5 from chromosome 19, complete sequence Length = 206288 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 191741 tttgttatttgatattct 191724
>ref|XM_648431.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (80.t00030) partial mRNA Length = 504 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 aaatatactttgttatttgata 29 ||||| |||||||||||||||| Sbjct: 167 aaataaactttgttatttgata 146
>ref|XM_723136.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07381) partial mRNA Length = 2214 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 ataaatatactttgttat 23 |||||||||||||||||| Sbjct: 1401 ataaatatactttgttat 1384
>gb|AC002429.1| Homo sapiens BAC clone GS1-200K5 from 7, complete sequence Length = 234053 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 agataaatatactttgtt 21 |||||||||||||||||| Sbjct: 124556 agataaatatactttgtt 124573
>gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete sequence Length = 136553 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 3 aagataaatatactttgttatt 24 |||||||||||| ||||||||| Sbjct: 60254 aagataaatatattttgttatt 60275
>emb|CR812472.9| Zebrafish DNA sequence from clone DKEY-110G7 in linkage group 3, complete sequence Length = 194804 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 8 aaatatactttgttatttgata 29 |||||||||||| ||||||||| Sbjct: 179180 aaatatactttgatatttgata 179159
>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the 3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1 gene for integrin beta 1 (fibronectin receptor beta polypeptide antigen CD29 includes MDF2 MSK12), an adenylate kinase 3 like 1 (AK3L1) pseudogene, a novel gene, the 5' end of a novel gene, a NADH dehydrogenase subunit 4L (ND4L) pseudogene, a pseudogene similar to part of integrin beta 2 (antigen CD18 (p95) lymphocyte function-associated antigen 1; macrophage antigen 1 (mac-1) beta subunit) (ITGB2) and a CpG island, complete sequence Length = 197973 Score = 36.2 bits (18), Expect = 2.9 Identities = 24/26 (92%) Strand = Plus / Minus Query: 6 ataaatatactttgttatttgatatt 31 |||||||||||||| |||||||||| Sbjct: 18605 ataaatatactttggaatttgatatt 18580
>emb|AL354916.16| Human DNA sequence from clone RP11-26K22 on chromosome 10 Contains a CpG island, complete sequence Length = 140148 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 ggaagataaatatacttt 18 |||||||||||||||||| Sbjct: 119186 ggaagataaatatacttt 119169
>emb|AL158051.10| Human DNA sequence from clone RP1-160B9 on chromosome 6q12-13 Contains part of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 69522 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 tatactttgttatttgat 28 |||||||||||||||||| Sbjct: 40621 tatactttgttatttgat 40638
>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11 Length = 347636 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 ctttgttatttgatattc 32 |||||||||||||||||| Sbjct: 16089 ctttgttatttgatattc 16106
>emb|BX323579.20| Zebrafish DNA sequence from clone DKEYP-79E11 in linkage group 14, complete sequence Length = 120579 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 ataaatatactttgttat 23 |||||||||||||||||| Sbjct: 18931 ataaatatactttgttat 18914
>gb|AC010660.6| Drosophila melanogaster 3L BAC RP98-9I16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186795 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 agataaatatactttgtt 21 |||||||||||||||||| Sbjct: 183297 agataaatatactttgtt 183314
>gb|AC091203.3| Drosophila melanogaster 3L BAC RP98-48N8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 176929 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 110718 aaatatactttgttattt 110701
>gb|AC104704.1| Drosophila melanogaster 3L BAC RP98-8H6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169705 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 agataaatatactttgtt 21 |||||||||||||||||| Sbjct: 10155 agataaatatactttgtt 10172
>gb|AC068727.8| Homo sapiens chromosome 15 clone RP11-90M11 map 15q15, complete sequence Length = 175808 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 agataaatatactttgtt 21 |||||||||||||||||| Sbjct: 118929 agataaatatactttgtt 118912
>gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete sequence Length = 111147 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 gataaatatactttgtta 22 |||||||||||||||||| Sbjct: 63360 gataaatatactttgtta 63377
>gb|AC108114.3| Homo sapiens chromosome 5 clone RP11-289K10, complete sequence Length = 161812 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 135576 aaatatactttgttattt 135559
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 4 agataaatatactttgttattt 25 ||||||||||||||| |||||| Sbjct: 1306510 agataaatatactttattattt 1306531
>emb|CR338927.2| Gallus gallus finished cDNA, clone ChEST991f10 Length = 1000 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 taaatatactttgttatttgat 28 ||||| |||||||||||||||| Sbjct: 552 taaatttactttgttatttgat 573
>gb|AC068291.6| Homo sapiens BAC clone RP11-670I21 from 2, complete sequence Length = 113955 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 20864 aaatatactttgttattt 20847
>gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E22, complete sequence Length = 165916 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 597 aaatatactttgttattt 580
>gb|AC096669.1| Homo sapiens BAC clone RP11-380G16 from 2, complete sequence Length = 218670 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 9 aatatactttgttatttgatat 30 ||||||||||| |||||||||| Sbjct: 79325 aatatactttgatatttgatat 79304
>gb|AC027243.20| Homo sapiens chromosome 15, clone RP11-685G9, complete sequence Length = 195806 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 aagataaatatactttgt 20 |||||||||||||||||| Sbjct: 131609 aagataaatatactttgt 131626
>gb|AC128711.4| Homo sapiens 3 BAC RP11-70N22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94869 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 taaatatactttgttatt 24 |||||||||||||||||| Sbjct: 2769 taaatatactttgttatt 2752
>gb|AC124989.7| Mus musculus chromosome 1, clone RP24-404O8, complete sequence Length = 184453 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 taaatatactttgttatt 24 |||||||||||||||||| Sbjct: 71717 taaatatactttgttatt 71700
>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete sequence Length = 640681 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 aaatatactttgttatttgata 29 ||||||||||| |||||||||| Sbjct: 105236 aaatatacttttttatttgata 105257
>dbj|BS000063.1| Pan troglodytes chromosome 22 clone:PTB-428P03, map 22, complete sequences Length = 136131 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 79566 tttgttatttgatattct 79549
>gb|AF240629.1|AF240629 Homo sapiens chromosome 21 map 21q21 clone B47C12, complete sequence Length = 151696 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 78649 tttgttatttgatattct 78632
>emb|BX322665.5| Zebrafish DNA sequence from clone DKEY-183N20 in linkage group 20, complete sequence Length = 192437 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 9 aatatactttgttatttg 26 |||||||||||||||||| Sbjct: 99496 aatatactttgttatttg 99479
>gb|AC091266.8| Mus musculus chromosome 1, clone RP23-366C1, complete sequence Length = 177529 Score = 36.2 bits (18), Expect = 2.9 Identities = 24/26 (92%) Strand = Plus / Plus Query: 3 aagataaatatactttgttatttgat 28 |||||| ||||| ||||||||||||| Sbjct: 99094 aagatacatatattttgttatttgat 99119
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 110083 aaatatactttgttattt 110066
>gb|AE003527.3| Drosophila melanogaster chromosome 3L, section 58 of 83 of the complete sequence Length = 279904 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 agataaatatactttgtt 21 |||||||||||||||||| Sbjct: 127921 agataaatatactttgtt 127938
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105 Length = 340000 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 264540 tttgttatttgatattct 264523
>gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome 17, complete sequence Length = 214723 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 31874 aaatatactttgttattt 31891
>emb|BX005050.6| Zebrafish DNA sequence from clone CH211-11A11, complete sequence Length = 166695 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 6 ataaatatactttgttatttga 27 ||||||||||| |||||||||| Sbjct: 40105 ataaatatactatgttatttga 40126
>emb|BX005066.3| Zebrafish DNA sequence from clone CH211-152F23 in linkage group 3, complete sequence Length = 172909 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 6 ataaatatactttgttatttga 27 ||||||||||||| |||||||| Sbjct: 4505 ataaatatacttttttatttga 4484
>gb|AC153833.5| Mus musculus 6 BAC RP23-308F24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170164 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 9 aatatactttgttatttgatat 30 ||||||||||||| |||||||| Sbjct: 82947 aatatactttgttttttgatat 82968
>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete sequence Length = 206348 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 5 gataaatatactttgttatttg 26 |||||||||||||||| ||||| Sbjct: 69337 gataaatatactttgtaatttg 69316
>emb|AL837515.9| Zebrafish DNA sequence from clone CH211-261F22 in linkage group 5, complete sequence Length = 153980 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 8 aaatatactttgttatttgata 29 |||||||||||| ||||||||| Sbjct: 32525 aaatatactttgatatttgata 32546
>emb|AL034399.6|HS191P20 Human DNA sequence from clone RP6-191P20 on chromosome Xq23 Contains the TEX13B gene for testis expressed sequence 13B, a novel pseudogene, the 3' end of the MID2 gene for midline 2 (FXY2, RNF60, TRIM1), a novel gene and a CpG island, complete sequence Length = 118456 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 19406 tttgttatttgatattct 19389
>emb|CT030193.7| Mouse DNA sequence from clone RP24-272P19 on chromosome 17, complete sequence Length = 159435 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 106600 aaatatactttgttattt 106617
>emb|AL772220.7| Mouse DNA sequence from clone RP23-409N18 on chromosome 4, complete sequence Length = 176159 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 aaatatactttgttattt 25 |||||||||||||||||| Sbjct: 17205 aaatatactttgttattt 17188
>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete sequence Length = 132674 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 43416 tttgttatttgatattct 43399
>emb|AL137065.10| Human DNA sequence from clone RP11-4P13 on chromosome Xq22.1-23, complete sequence Length = 119311 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 56949 tttgttatttgatattct 56966
>dbj|AP000957.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B781M3, LL56-APP region, complete sequence Length = 190937 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 tttgttatttgatattct 33 |||||||||||||||||| Sbjct: 36629 tttgttatttgatattct 36612 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 513,264 Number of Sequences: 3902068 Number of extensions: 513264 Number of successful extensions: 149294 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149072 Number of HSP's gapped (non-prelim): 222 length of query: 33 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 13 effective length of database: 17,155,003,908 effective search space: 223015050804 effective search space used: 223015050804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
