Clone Name	rbastl44g08
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA	121	2e-24
2	dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clon...	121	2e-24
3	dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clon...	115	1e-22
4	gb|AY109108.1| Zea mays PCO116815 mRNA sequence	82	2e-12
5	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	78	2e-11
6	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	78	2e-11
7	gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome...	78	2e-11
8	gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom...	76	1e-10
9	gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom...	76	1e-10
10	gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence	62	1e-06
11	gb|AY112223.1| Zea mays CL3071_1 mRNA sequence	60	6e-06
12	dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	58	2e-05
13	gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome...	54	4e-04
14	gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome...	52	0.001
15	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	52	0.001
16	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	52	0.001
17	ref|NM_197253.1| Oryza sativa (japonica cultivar-group) putative...	50	0.005
18	gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can...	46	0.086
19	gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno...	44	0.34
20	gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,...	42	1.3
21	ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING fin...	42	1.3
22	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
23	dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
24	dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
25	emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch...	42	1.3
26	gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp...	40	5.3
27	ref|XM_543770.2| PREDICTED: Canis familiaris similar to solute c...	40	5.3
28	gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosom...	40	5.3
29	emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, comp...	40	5.3
30	gb|AC162800.2| Mus musculus BAC clone RP24-173D2 from chromosome...	40	5.3
31	emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chr...	40	5.3
32	emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chro...	40	5.3
33	emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chr...	40	5.3
34	gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, comp...	40	5.3
35	gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, comple...	40	5.3
36	ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ...	40	5.3
37	gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel...	40	5.3
38	gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp...	40	5.3
39	gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosom...	40	5.3
40	gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co...	40	5.3
41	gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc...	40	5.3
42	gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp...	40	5.3
43	ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothe...	40	5.3
44	gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA	40	5.3
45	emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-3...	40	5.3
46	gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete...	40	5.3
47	gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71...	40	5.3
48	gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40...	40	5.3
49	gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm...	40	5.3
50	emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro...	40	5.3
51	gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park C...	40	5.3

---

>ref|XM_469360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score =  121 bits (61), Expect = 2e-24
 Identities = 145/173 (83%)
 Strand = Plus / Minus

                                                                        
Query: 212  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 271
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3092 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3033

                                                                        
Query: 272  gcttccatcttctgagacagggcatgctgtaacttttggatttcatccctctttttcctt 331
            |||||||| ||||| ||||| || || || | |||||| ||||| || ||||||||||| 
Sbjct: 3032 gcttccattttctgtgacagtgcgtgttggagcttttgaatttcttctctctttttcctc 2973

                                                                 
Query: 332  agcttttcgagctccacttccgcatttagagccccttgaagctgaaggtatac 384
            |||||||| ||||| ||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 2972 agcttttcaagctcaacttctgcattgagagctccttggagttgaaggtatac 2920

---

>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full
            insert sequence
          Length = 3587

 Score =  121 bits (61), Expect = 2e-24
 Identities = 145/173 (83%)
 Strand = Plus / Minus

                                                                        
Query: 212  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 271
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 3304 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3245

                                                                        
Query: 272  gcttccatcttctgagacagggcatgctgtaacttttggatttcatccctctttttcctt 331
            |||||||| ||||| ||||| || || || | |||||| ||||| || ||||||||||| 
Sbjct: 3244 gcttccattttctgtgacagtgcgtgttggagcttttgaatttcttctctctttttcctc 3185

                                                                 
Query: 332  agcttttcgagctccacttccgcatttagagccccttgaagctgaaggtatac 384
            |||||||| ||||| ||||| ||||| ||||| ||||| || |||||||||||
Sbjct: 3184 agcttttcaagctcaacttctgcattgagagctccttggagttgaaggtatac 3132

---

>dbj|AK066973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089D01, full
            insert sequence
          Length = 4411

 Score =  115 bits (58), Expect = 1e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 248  ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatgctgtaacttt 307
            |||||||||||| | |||||||| |||||||| ||||| || |||||||| || | ||||
Sbjct: 4113 ggagccttctctttataaccggaagcttccattttctgtgatagggcatgttgcagcttt 4054

                                                                        
Query: 308  tggatttcatccctctttttccttagcttttcgagctccacttccgcatttagagcccct 367
            || ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||| |||
Sbjct: 4053 tgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagagctcct 3994

                                  
Query: 368  tgaagctgaaggtatacggata 389
            || || || |||||||| ||||
Sbjct: 3993 tggagttggaggtatacagata 3972

---

>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 176/221 (79%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 220
           |||| |||||||||||| |||| |||||||   |||||||| || || ||||||||||||
Sbjct: 801 tctaatttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttc 742

                                                                       
Query: 221 ctcatgtcctcctcttggacactggggggagccttctctctgtaaccggacgcttccatc 280
           |||||||||||||| || || ||  | ||||||||||| |  || || || || ||||| 
Sbjct: 741 ctcatgtcctcctcctgtacgctctgtggagccttctcgcgatagccagaggcgtccatt 682

                                                                       
Query: 281 ttctgagacagggcatgctgtaacttttggatttcatccctctttttccttagcttttcg 340
           ||||| | ||| |||| ||||| |||||| || |||||  | || ||| |||||||||| 
Sbjct: 681 ttctgcgccagtgcattctgtagcttttgaatctcatcttttttcttctttagcttttca 622

                                                    
Query: 341 agctccacttccgcatttagagccccttgaagctgaaggta 381
            | ||  | || ||||||| ||| ||||| |||||||||||
Sbjct: 621 cgttcagcgtctgcatttaaagctccttggagctgaaggta 581

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                          
Query: 303    acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
              ||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 651915 acttttgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagag 651856

                                         
Query: 363    ccccttgaagctgaaggtatacggata 389
              | ||||| || || |||||||| ||||
Sbjct: 651855 ctccttggagttggaggtatacagata 651829



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                            
Query: 303      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
                ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 27542546 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 27542487

                                      
Query: 363      ccccttgaagctgaaggtatac 384
                | ||||| || |||||||||||
Sbjct: 27542486 ctccttggagttgaaggtatac 27542465



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 212      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 271
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27542742 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27542683

                                    
Query: 272      gcttccatcttctgagacag 291
                |||||||| ||||| |||||
Sbjct: 27542682 gcttccattttctgtgacag 27542663



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                            
Query: 303      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
                ||||||||||| |||| ||||| ||||||||||||||  ||||  | || |||||||  |
Sbjct: 12395975 acttttggattccatctctcttcttccttagcttttcacgctcagcctctgcatttatgg 12396034

                                   
Query: 363      ccccttgaagctgaaggta 381
                | |||||||||| ||||||
Sbjct: 12396035 ctccttgaagcttaaggta 12396053



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 248    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 297
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652074 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652025



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 158      gcatctagtttcttctcagcctcac 182
                |||||||||||||||||||| ||||
Sbjct: 12395727 gcatctagtttcttctcagcttcac 12395751

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                          
Query: 303    acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
              ||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 651913 acttttgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagag 651854

                                         
Query: 363    ccccttgaagctgaaggtatacggata 389
              | ||||| || || |||||||| ||||
Sbjct: 651853 ctccttggagttggaggtatacagata 651827



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                            
Query: 303      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
                ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 27633869 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 27633810

                                      
Query: 363      ccccttgaagctgaaggtatac 384
                | ||||| || |||||||||||
Sbjct: 27633809 ctccttggagttgaaggtatac 27633788



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                            
Query: 212      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 271
                ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 27634065 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27634006

                                    
Query: 272      gcttccatcttctgagacag 291
                |||||||| ||||| |||||
Sbjct: 27634005 gcttccattttctgtgacag 27633986



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                            
Query: 303      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
                ||||||||||| |||| ||||| ||||||||||||||  ||||  | || |||||||  |
Sbjct: 12392738 acttttggattccatctctcttcttccttagcttttcacgctcagcctctgcatttatgg 12392797

                                   
Query: 363      ccccttgaagctgaaggta 381
                | |||||||||| ||||||
Sbjct: 12392798 ctccttgaagcttaaggta 12392816



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 248    ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 297
              |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 652072 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 652023



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 158      gcatctagtttcttctcagcctcac 182
                |||||||||||||||||||| ||||
Sbjct: 12392490 gcatctagtttcttctcagcttcac 12392514

---

>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0005F16, complete sequence
          Length = 160053

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                         
Query: 303   acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
             ||||||| ||||| || |||||||||||||||||||| ||||| ||||| ||||| ||||
Sbjct: 37796 acttttgaatttcttctctctttttccttagcttttcaagctcaacttctgcattgagag 37737

                                        
Query: 363   ccccttgaagctgaaggtatacggata 389
             | ||||| || || |||||||| ||||
Sbjct: 37736 ctccttggagttggaggtatacagata 37710



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 248   ggagccttctctctgtaaccggacgcttccatcttctgagacagggcatg 297
             |||||||||||| | |||||||| |||||||| ||||| || ||||||||
Sbjct: 37955 ggagccttctctttataaccggaagcttccattttctgtgatagggcatg 37906

---

>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete
             sequence
          Length = 27470

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                         
Query: 303   acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
             ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 20228 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 20287

                                   
Query: 363   ccccttgaagctgaaggtatac 384
             | ||||| || |||||||||||
Sbjct: 20288 ctccttggagttgaaggtatac 20309



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                         
Query: 212   gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 271
             ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 20032 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 20091

                                 
Query: 272   gcttccatcttctgagacag 291
             |||||||| ||||| |||||
Sbjct: 20092 gcttccattttctgtgacag 20111

---

>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence,
            complete sequence
          Length = 123406

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                        
Query: 303  acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
            ||||||| ||||| || ||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 7968 acttttgaatttcttctctctttttcctcagcttttcaagctcaacttctgcattgagag 8027

                                  
Query: 363  ccccttgaagctgaaggtatac 384
            | ||||| || |||||||||||
Sbjct: 8028 ctccttggagttgaaggtatac 8049



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                        
Query: 212  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaaccggac 271
            ||||| || |||||||||||||| |||||| |  | |||||||||||| ||||||| || 
Sbjct: 7772 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 7831

                                
Query: 272  gcttccatcttctgagacag 291
            |||||||| ||||| |||||
Sbjct: 7832 gcttccattttctgtgacag 7851

---

>gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence
          Length = 1244

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 142/179 (79%)
 Strand = Plus / Minus

                                                                       
Query: 161 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 220
           |||| |||||||||||| |||| |||||||   ||||| || || || |||| |||||| 
Sbjct: 953 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggggagcttt 894

                                                                       
Query: 221 ctcatgtcctcctcttggacactggggggagccttctctctgtaaccggacgcttccatc 280
           |||||||||||||| || || ||  | ||||||||||| |  || || || || ||||| 
Sbjct: 893 ctcatgtcctcctcctgcacgctctgtggagccttctcgcgatacccagaggcgtccatt 834

                                                                      
Query: 281 ttctgagacagggcatgctgtaacttttggatttcatccctctttttccttagcttttc 339
           ||||| | ||| ||||  |||| |||||| ||||||||  | || ||||||||||||||
Sbjct: 833 ttctgtgccagtgcattttgtagcttttgaatttcatcttttttcttccttagcttttc 775

---

>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 161 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 220
           |||| |||||||||||| |||| |||||||   ||||| || || || ||||||||||| 
Sbjct: 446 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagcttt 505

                         
Query: 221 ctcatgtcctcctc 234
           ||||||||||||||
Sbjct: 506 ctcatgtcctcctc 519

---

>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full
            insert sequence
          Length = 3639

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                        
Query: 293  gcatgctgtaacttttggatttcatccctctttttccttagcttttcgagctccacttcc 352
            ||||| |||| |||||||||| |||| ||||| ||||||||||||||  ||||  | || 
Sbjct: 3384 gcatggtgtagcttttggattccatctctcttcttccttagcttttcacgctcagcctct 3325

                                         
Query: 353  gcatttagagccccttgaagctgaaggta 381
            |||||||  || |||||||||| ||||||
Sbjct: 3324 gcatttatggctccttgaagcttaaggta 3296



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 158  gcatctagtttcttctcagcctcac 182
            |||||||||||||||||||| ||||
Sbjct: 3519 gcatctagtttcttctcagcttcac 3495

---

>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0098H14, complete sequence
          Length = 132560

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                         
Query: 303   acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
             ||||||||||| |||| ||||| ||||||||||||||  ||||  | || |||||||  |
Sbjct: 54993 acttttggattccatctctcttcttccttagcttttcacgctcagcctctgcatttatgg 55052

                                
Query: 363   ccccttgaagctgaaggta 381
             | |||||||||| ||||||
Sbjct: 55053 ctccttgaagcttaaggta 55071



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 158   gcatctagtttcttctcagcctcac 182
             |||||||||||||||||||| ||||
Sbjct: 54745 gcatctagtttcttctcagcttcac 54769

---

>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05
              map S21174S, complete sequence
          Length = 178867

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                          
Query: 303    acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
              ||||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  |||||||
Sbjct: 141536 acttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagag 141477

                                                
Query: 363    ccccttgaagctgaaggtatacggataggtcttt 396
              | ||| | ||||| |||||||||||||| |||||
Sbjct: 141476 ctcctcgtagctggaggtatacggatagatcttt 141443

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                            
Query: 303      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
                ||||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  |||||||
Sbjct: 18843800 acttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagag 18843741

                                                  
Query: 363      ccccttgaagctgaaggtatacggataggtcttt 396
                | ||| | ||||| |||||||||||||| |||||
Sbjct: 18843740 ctcctcgtagctggaggtatacggatagatcttt 18843707

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 77/94 (81%)
 Strand = Plus / Minus

                                                                            
Query: 303      acttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagag 362
                ||||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  |||||||
Sbjct: 18855054 acttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagag 18854995

                                                  
Query: 363      ccccttgaagctgaaggtatacggataggtcttt 396
                | ||| | ||||| |||||||||||||| |||||
Sbjct: 18854994 ctcctcgtagctggaggtatacggatagatcttt 18854961

---

>ref|NM_197253.1| Oryza sativa (japonica cultivar-group) putative valyl tRNA synthetase
            (OSJNBa0062C05.27), mRNA
          Length = 3171

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 76/93 (81%)
 Strand = Plus / Minus

                                                                        
Query: 304  cttttggatttcatccctctttttccttagcttttcgagctccacttccgcatttagagc 363
            |||||| || ||||| | ||||||||||||||| ||  ||||  |||| |  ||||||||
Sbjct: 3015 cttttgaatctcatctcgctttttccttagcttctcacgctcagcttcagtgtttagagc 2956

                                             
Query: 364  cccttgaagctgaaggtatacggataggtcttt 396
             ||| | ||||| |||||||||||||| |||||
Sbjct: 2955 tcctcgtagctggaggtatacggatagatcttt 2923

---

>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 28     tttgaattttctataaatgtgacatca 54
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188

---

>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 26    catttgaattttctataaatgt 47
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687

---

>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    atttgaattttctataaatgt 47
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196

---

>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc
            in-between-RING-finger ubiquitin-associated domain
            protein) (LOC480259), mRNA
          Length = 3490

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 177  cctcaccgatgacccgcagttgctc 201
            ||||||||||||| |||||||||||
Sbjct: 2442 cctcaccgatgacacgcagttgctc 2466

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 83      tatcaacttccaaacaaaaat 103
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822

---

>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 83     tatcaacttccaaacaaaaat 103
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064

---

>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    tatcaacttccaaacaaaaat 103
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457

---

>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     aatgtgacatcaccaccatcc 63
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002

---

>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ccatttgaattttctataaa 44
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189

---

>ref|XM_543770.2| PREDICTED: Canis familiaris similar to solute carrier family 7
            (cationic amino acid transporter, y+ system), member 3
            (LOC486643), mRNA
          Length = 3279

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 295  atgctgtaacttttggattt 314
            ||||||||||||||||||||
Sbjct: 1571 atgctgtaacttttggattt 1590

---

>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aacttccaaacaaaaatgcc 106
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766

---

>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   aacttccaaacaaaaatgcc 106
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668

---

>gb|AC162800.2| Mus musculus BAC clone RP24-173D2 from chromosome 17, complete sequence
          Length = 199202

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 357   ttagagccccttgaagctgaaggt 380
             ||||| ||||||||||||||||||
Sbjct: 47915 ttagatccccttgaagctgaaggt 47938

---

>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the
             HHEX gene for hematopoietically expressed homeobox, the 5'
             end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a
             eukaryotic translation initiation factor 2 subunit 2
             (eIF-2-beta) pseudogene and four CpG islands, complete
             sequence
          Length = 190144

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   agagccccttgaagctgaag 378
             ||||||||||||||||||||
Sbjct: 76717 agagccccttgaagctgaag 76736

---

>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the
             3' end of the Col27a1 gene for procollagen type XXVII
             alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1,
             2 and 3, an orosomucoid pseudogene, the gene for a novel
             protein similar to human AT-hook protein AKNA, gene
             4933437N03Rik, the Whrn gene for whirlin and two CpG
             islands, complete sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   gagcttcctcatgtcctcct 233
             ||||||||||||||||||||
Sbjct: 31754 gagcttcctcatgtcctcct 31735

---

>emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chromosome 4 Contains a
             ribosomal protein S18 (Rps18) pseudogene, complete
             sequence
          Length = 156572

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   ttccatcttctgagacaggg 293
             ||||||||||||||||||||
Sbjct: 31116 ttccatcttctgagacaggg 31135

---

>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 319    cctctttttccttagctttt 338
              ||||||||||||||||||||
Sbjct: 147791 cctctttttccttagctttt 147772

---

>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   gcttcctcatgtcctcctct 235
             ||||||||||||||||||||
Sbjct: 23507 gcttcctcatgtcctcctct 23526

---

>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743

---

>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaattttctataaatgtgac 50
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223

---

>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   attttctataaatgtgacat 52
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980

---

>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aacttccaaacaaaaatgcc 106
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621

---

>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tgaattttctataaatgtga 49
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076

---

>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     catttgaattttctataaat 45
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080

---

>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    attttctataaatgtgacat 52
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793

---

>ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            6430402L03 (LOC302412), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  cttcctcatgtcctcctctt 236
            ||||||||||||||||||||
Sbjct: 1005 cttcctcatgtcctcctctt 986

---

>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711

---

>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    atgtgacatcaccaccatcc 63
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026

---

>gb|AC134339.6| Mus musculus BAC clone RP23-5F21 from 8, complete sequence
          Length = 229073

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    ctgtaacttttggatttcat 317
              ||||||||||||||||||||
Sbjct: 161157 ctgtaacttttggatttcat 161138

---

>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     gaattttctataaatgtgac 50
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377

---

>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tgaattttctataaatgtga 49
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358

---

>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   gaattttctataaatgtgac 50
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699

---

>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     tttgaattttctataaatgt 47
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461

---

>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 171887

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   cttttggatttcatccctct 323
             ||||||||||||||||||||
Sbjct: 59407 cttttggatttcatccctct 59388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,150,942
Number of Sequences: 3902068
Number of extensions: 4150942
Number of successful extensions: 118013
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117709
Number of HSP's gapped (non-prelim): 298
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---