Clone Information

BLAST Search Result

Clone Name	rbastl44f06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PHOT2_ARATH (P93025) Phototropin-2 (EC 2.7.11.1) (Defective in c...	40	0.001
2	PHOT1_ARATH (O48963) Phototropin-1 (EC 2.7.11.1) (Non-phototropi...	40	0.002
3	EDG3_MOUSE (Q9Z0U9) Sphingosine 1-phosphate receptor Edg-3 (S1P ...	31	0.66
4	TT1_ARATH (Q8VWG3) TRANSPARENT TESTA 1 protein (Zinc finger prot...	31	0.66
5	KPK7_ARATH (Q05999) Putative serine/threonine-protein kinase PK7...	31	0.66
6	G11A_ORYSA (P47997) Protein kinase G11A (EC 2.7.11.1)	31	0.86
7	PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-s...	30	1.1
8	RFNG_HUMAN (Q9Y644) Beta-1,3-N-acetylglucosaminyltransferase rad...	30	1.5
9	EDG3_HUMAN (Q99500) Sphingosine 1-phosphate receptor Edg-3 (S1P ...	30	1.5
10	LSP2_DROME (Q24388) Larval serum protein 2 precursor (LSP-2) (He...	30	1.9
11	GLMS_SYNEL (Q8DJI6) Glucosamine--fructose-6-phosphate aminotrans...	30	1.9
12	IL21R_HUMAN (Q9HBE5) Interleukin-21 receptor precursor (IL-21R) ...	30	1.9
13	KI18A_HUMAN (Q8NI77) Kinesin family member 18A	30	1.9
14	ZN646_HUMAN (O15015) Zinc finger protein 646	29	2.5
15	SEL1L_HUMAN (Q9UBV2) Sel-1 homolog precursor (Suppressor of lin-...	29	2.5
16	POLN_EEVVC (Q8V294) Nonstructural polyprotein (Polyprotein nsP12...	29	2.5
17	POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP12...	29	2.5
18	POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP12...	29	2.5
19	POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP12...	29	2.5
20	POLN_EEVVM (Q9WJC7) Nonstructural polyprotein (Polyprotein nsP12...	29	2.5
21	FKS26_MOUSE (Q8R3L2) Protein FKSG26	29	2.5
22	FA53B_HUMAN (Q14153) Protein FAM53B	29	2.5
23	SEL1L_RAT (Q80Z70) Sel-1 homolog precursor (Suppressor of lin-12...	29	3.3
24	SEL1L_MOUSE (Q9Z2G6) Sel-1 homolog precursor (Suppressor of lin-...	29	3.3
25	SEL1L_MESAU (Q9ESM7) Sel-1 homolog precursor (Suppressor of lin-...	28	4.3
26	POLN_EEEVF (Q4QXJ8) Nonstructural polyprotein (Polyprotein nsP12...	28	4.3
27	MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)	28	4.3
28	ESC1_SCHPO (Q04635) Protein esc1	28	5.6
29	GCSP_CHRVO (Q7NSJ5) Glycine dehydrogenase [decarboxylating] (EC ...	28	5.6
30	REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing pro...	28	7.3
31	PET_ECOLI (O68900) Serine protease pet precursor (EC 3.4.21.-) (...	28	7.3
32	R1AB_CVMA5 (P16342) Replicase polyprotein 1ab (pp1ab) (ORF1ab po...	28	7.3
33	MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupl...	28	7.3
34	FA53B_MOUSE (Q8BGR5) Protein FAM53B	28	7.3
35	R1AB_CVMJH (P19751) Replicase polyprotein 1ab (pp1ab) (ORF1ab po...	28	7.3
36	DAN4_YEAST (P47179) Cell wall protein DAN4 precursor	28	7.3
37	BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (...	27	9.5
38	EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline...	27	9.5
39	TENA_HUMAN (P24821) Tenascin precursor (TN) (Hexabrachion) (Cyto...	27	9.5
40	AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)	27	9.5
41	PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific prot...	27	9.5
42	NFASC_CHICK (O42414) Neurofascin precursor	27	9.5
43	GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4) (Endo...	27	9.5

>PHOT2_ARATH (P93025) Phototropin-2 (EC 2.7.11.1) (Defective in chloroplast|
           avoidance protein 1) (Non phototropic hypocotyl 1-like
           protein 1) (NPH1-like 1) (AtKin7)
          Length = 915

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1

Query: 355 FRGINWALVRGTAPPKLDAPL 293
           FRGINW L+RG +PP LDAPL
Sbjct: 864 FRGINWPLIRGMSPPPLDAPL 884

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>PHOT1_ARATH (O48963) Phototropin-1 (EC 2.7.11.1) (Non-phototropic hypocotyl|
            protein 1) (Root phototropism protein 1)
          Length = 996

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -1

Query: 355  FRGINWALVRGTAPPKLDAPLFS 287
            F+GINWAL+R T PP+L+ P+FS
Sbjct: 952  FKGINWALIRCTNPPELETPIFS 974

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>EDG3_MOUSE (Q9Z0U9) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor|
           Edg-3) (Endothelial differentiation G-protein coupled
           receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3)
           (Lysophospholipid receptor B3)
          Length = 378

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = -2

Query: 303 TLHCFPRTWAREWAMLPPPIMAPTCSERRRWMERHAKDVVSRPCSLNHGSCV---VGCCW 133
           T    P  W      +   + A TCS     +ERH   +  RP   N    V   +G CW
Sbjct: 104 TFSLSPTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKKHRVFLLIGMCW 163

Query: 132 LFSFSV 115
           L +FS+
Sbjct: 164 LIAFSL 169

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>TT1_ARATH (Q8VWG3) TRANSPARENT TESTA 1 protein (Zinc finger protein TT1)|
           (TTL1)
          Length = 303

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
 Frame = +1

Query: 124 RKQPATTNNTRPMIERARPRYY-IFGMSFH-------PPSSFRTCRXHYRRRQ-HRPFPC 276
           RK P +   T+P      P Y  + G   H       P   FRT + HY+R+  H+PF C
Sbjct: 172 RKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSC 231

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>KPK7_ARATH (Q05999) Putative serine/threonine-protein kinase PK7 (EC 2.7.11.1)|
          Length = 578

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = -1

Query: 355 FRGINWALVRGTAPPKLDAPL 293
           F+ +NWAL+R T+PP++  P+
Sbjct: 516 FQSVNWALIRCTSPPQIPQPV 536

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>G11A_ORYSA (P47997) Protein kinase G11A (EC 2.7.11.1)|
          Length = 589

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = -1

Query: 355 FRGINWALVRGTAPPKLDAPL 293
           F G+NWAL+R  +PP++  P+
Sbjct: 533 FEGVNWALIRCASPPEVPRPV 553

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>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific|
           proteoglycan core protein) (CSPCP) (Chondroitin sulfate
           proteoglycan core protein 1) [Contains: Aggrecan core
           protein 2]
          Length = 2415

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +1

Query: 265 PFPCPRPWKTVERPASEEPCRAQEPS 342
           PFP  RP+ +VE   SEEP  ++EPS
Sbjct: 804 PFPSVRPFPSVELFPSEEPFPSKEPS 829

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>RFNG_HUMAN (Q9Y644) Beta-1,3-N-acetylglucosaminyltransferase radical fringe|
           (EC 2.4.1.222) (O-fucosylpeptide
           3-beta-N-acetylglucosaminyltransferase)
          Length = 331

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +1

Query: 55  PLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIF 195
           P R   P+L P    +   T RK   P      R  I RAR + +IF
Sbjct: 47  PSRPAAPSLRPDDVFIAVKTTRKNHGPRLRLLLRTWISRARQQTFIF 93

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>EDG3_HUMAN (Q99500) Sphingosine 1-phosphate receptor Edg-3 (S1P receptor|
           Edg-3) (Endothelial differentiation G-protein coupled
           receptor 3) (Sphingosine 1-phosphate receptor 3) (S1P3)
          Length = 378

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
 Frame = -2

Query: 303 TLHCFPRTWAREWAMLPPPIMAPTCSERRRWMERHAKDVVSRPCSLNHGSCV---VGCCW 133
           T    P  W      +   + A TCS     +ERH   +  RP   N    V   +G CW
Sbjct: 103 TFSLSPTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKRHRVFLLIGMCW 162

Query: 132 LFSFSV 115
           L +F++
Sbjct: 163 LIAFTL 168

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>LSP2_DROME (Q24388) Larval serum protein 2 precursor (LSP-2) (Hexamerin 2)|
          Length = 701

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/60 (26%), Positives = 23/60 (38%)
 Frame = +1

Query: 91  PTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFRTCRXHYRRRQHRPF 270
           P  LTT         +   N  P +E +    Y FG + H   S    +   +R  H+PF
Sbjct: 448 PESLTTYFEHFDSDISNAVNVEPAVEGSADPLYTFGRNSHYKGSSYVIKARQQRLNHKPF 507

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>GLMS_SYNEL (Q8DJI6) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 625

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 19/82 (23%)
 Frame = +1

Query: 64  STTPALIP----------------SPT---VLTTSTNRKRKQPATTNNTRPMIERARPRY 186
           S TPA+IP                +PT   V     +R RK P T N    M+E+   ++
Sbjct: 195 SDTPAIIPYTRAVLPLENGELARLTPTGVEVYDFEGHRLRKTPRTLNWNPVMVEKQGFKH 254

Query: 187 YIFGMSFHPPSSFRTCRXHYRR 252
           Y+    +  P   R C  +Y R
Sbjct: 255 YMLKEIYEQPGVVRACLENYLR 276

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>IL21R_HUMAN (Q9HBE5) Interleukin-21 receptor precursor (IL-21R) (Novel|
           interleukin receptor)
          Length = 538

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -2

Query: 288 PRTWAREWAMLPPPIMAP 235
           PR++ R+W ++PPP+ +P
Sbjct: 516 PRSYLRQWVVIPPPLSSP 533

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>KI18A_HUMAN (Q8NI77) Kinesin family member 18A|
          Length = 898

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +1

Query: 73  PALIPSPTVLTTSTNRKRKQPATTNNT 153
           P+++PS   +TT+  RKRK  ++T+N+
Sbjct: 814 PSMVPSYMAMTTAAKRKRKLTSSTSNS 840

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>ZN646_HUMAN (O15015) Zinc finger protein 646|
          Length = 1829

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/72 (23%), Positives = 35/72 (48%)
 Frame = +1

Query: 73  PALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFRTCRXHYRR 252
           P++ P+P +L  +T+++ + P TT + RP       +    G ++    S    R  +R 
Sbjct: 436 PSVPPAPLLLAETTHKEEEDPTTTLDHRPY------KCSECGRAYRHRGSLVNHRHSHRT 489

Query: 253 RQHRPFPCPRPW 288
            +++   CPR +
Sbjct: 490 GEYQCSLCPRKY 501

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>SEL1L_HUMAN (Q9UBV2) Sel-1 homolog precursor (Suppressor of lin-12-like|
           protein) (Sel-1L)
          Length = 794

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 244 YRRRQHRPFPCPRPWKTVERPASEEPCRAQEP 339
           YR+RQH+  P PRP      P  +E    Q+P
Sbjct: 761 YRQRQHQDMPAPRPPGPRPAPPQQEGPPEQQP 792

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>POLN_EEVVC (Q8V294) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2496

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

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>POLN_EEVV3 (P36327) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2485

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

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>POLN_EEVVT (P27282) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

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>POLN_EEVVP (P36328) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2492

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

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>POLN_EEVVM (Q9WJC7) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2498

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 216 RWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           RW + + +D    RP  L     V+GCCW F
Sbjct: 393 RWAKEYKEDQEDERPLGLRDRQLVMGCCWAF 423

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>FKS26_MOUSE (Q8R3L2) Protein FKSG26|
          Length = 676

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
 Frame = +1

Query: 49  ITPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFR 228
           I  L  T+P  + S   L+ +   +  Q       R +IERA    Y    +FHP  S  
Sbjct: 275 IVVLLQTSPYHVDSLLQLSDACRFQEDQEMA----RDLIERA---LYSMECAFHPLFSLT 327

Query: 229 --TCRXHYRRRQHRPF 270
             TCR  YRR ++R F
Sbjct: 328 SGTCRLDYRRPENRSF 343

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>FA53B_HUMAN (Q14153) Protein FAM53B|
          Length = 422

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 55  PLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARP 180
           P  ++TPA  P     ++  +R R QP   N+ +  ++R RP
Sbjct: 244 PSANSTPASTPELARRSSGLSRSRSQPCVLNDKKVGVKRRRP 285

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>SEL1L_RAT (Q80Z70) Sel-1 homolog precursor (Suppressor of lin-12-like|
           protein) (Sel-1L)
          Length = 794

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 244 YRRRQHRPFPCPRPWKTVERPASEEPCRAQEP 339
           YR+RQH+  P PRP      P  +E    Q+P
Sbjct: 761 YRQRQHQDIPVPRPPGPRPAPPQQEGPPEQQP 792

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>SEL1L_MOUSE (Q9Z2G6) Sel-1 homolog precursor (Suppressor of lin-12-like|
           protein) (Sel-1L)
          Length = 790

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 244 YRRRQHRPFPCPRPWKTVERPASEEPCRAQEP 339
           YR+RQH+  P PRP      P  +E    Q+P
Sbjct: 757 YRQRQHQDIPVPRPPGPRPAPPQQEGPPEQQP 788

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>SEL1L_MESAU (Q9ESM7) Sel-1 homolog precursor (Suppressor of lin-12-like|
           protein) (Sel-1L)
          Length = 794

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 244 YRRRQHRPFPCPRPWKTVERPASEEPCRAQEP 339
           YR+RQH+  P PRP      P  +E    Q+P
Sbjct: 761 YRQRQHQDVPVPRPPGPWPAPPQQEGPPEQQP 792

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>POLN_EEEVF (Q4QXJ8) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
           [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
           2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
           Protease/triphosphatase/NTPase/helicase nsP2 (EC
           3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2493

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 249 PIMAPTCSERRRWMERHAKDVVS-RPCSLNHGSCVVGCCWLF 127
           P++A   S   RW   H  D+   +   +   S V+GCCW F
Sbjct: 383 PVVAQAFS---RWAREHRADLEDEKGLGVRERSLVMGCCWAF 421

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>MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)|
          Length = 1152

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
 Frame = +1

Query: 22   AYLI*SRYKITPLRS---TTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPR 183
            A ++ SR K TP+ S   TTP +   PT    S+   R     TN + P ++  R +
Sbjct: 882  AGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSK 938

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>ESC1_SCHPO (Q04635) Protein esc1|
          Length = 413

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
 Frame = +1

Query: 55  PLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSSFRTC 234
           PLR  +     +P+   +ST    +Q   T+N+ P+   + P  +  G +  PP +    
Sbjct: 18  PLRQMSQPTTSAPSNSASSTPYSPQQVPLTHNSYPL---STPSSFQHGQTRLPPINCLA- 73

Query: 235 RXHYRRRQHRPFPCPRPW-KTVERPASEEPCRA 330
                     PF  P+PW      PAS  P  A
Sbjct: 74  ---------EPFNRPQPWHSNSAAPASSSPTSA 97

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>GCSP_CHRVO (Q7NSJ5) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 950

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 20/69 (28%), Positives = 29/69 (42%)
 Frame = -2

Query: 342 TGLLCAARLLRSWTLHCFPRTWAREWAMLPPPIMAPTCSERRRWMERHAKDVVSRPCSLN 163
           TG       L +  L   P    RE A+L  P+     SE    M R+ K + +R  ++N
Sbjct: 437 TGKPADIAALDAAALDAIPAALKRESAILTHPVFNTHHSEHE--MLRYMKKLENRDLAMN 494

Query: 162 HGSCVVGCC 136
           H    +G C
Sbjct: 495 HSMISLGSC 503

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>REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing protein 2|
           (RalBP1-interacting protein 2) (Partner of RalBP1)
          Length = 660

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = +1

Query: 127 KQPATTNNTRPMIERARPRYYIFGMSFHPPSSFRTCRXHYRRRQHRPFPCPRPWKTVERP 306
           + PAT  ++  +  R R R Y          S  +     +R +  P P PRP KT  R 
Sbjct: 442 EDPATPKDSNSLKARPRSRSY----------SSTSIEEAMKRGEDPPTPPPRPQKTHSRA 491

Query: 307 ASEEPCRAQEPS 342
           +S +  +  +PS
Sbjct: 492 SSLDLNKVFQPS 503

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>PET_ECOLI (O68900) Serine protease pet precursor (EC 3.4.21.-)|
           (Plasmid-encoded toxin pet)
          Length = 1295

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +3

Query: 27  FNMIPIQDYSTALNNSSAYSI--SYRPNYEYEQKKKTASNNQQH 152
           F  +P+ D+S+A  N +A SI  +Y     +  K K+++N Q +
Sbjct: 94  FPALPVPDFSSATANGAATSIGGAYAVTVAHNAKNKSSANYQTY 137

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>R1AB_CVMA5 (P16342) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44);
            3C-like proteinase
          Length = 7176

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 151  CCWLLLAVFFFCS 113
            CCW+L + F FCS
Sbjct: 3646 CCWILASTFLFCS 3658

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>MTR1L_HUMAN (Q13585) Melatonin-related receptor (G protein-coupled receptor 50)|
           (H9)
          Length = 613

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 58  LRSTTPALIPSPTVLTTSTN 117
           L S T A +P PTV+TTSTN
Sbjct: 575 LESDTIADLPDPTVVTTSTN 594

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>FA53B_MOUSE (Q8BGR5) Protein FAM53B|
          Length = 422

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 55  PLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERARP 180
           P  ++TPA  P     ++   R R QP   N+ +  ++R RP
Sbjct: 245 PSANSTPASTPELARRSSGLARSRSQPCVLNDKKIGVKRRRP 286

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>R1AB_CVMJH (P19751) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)|
            [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)]
            [Contains: p28; p65; p210 (EC 3.4.22.-) (Papain-like
            proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2 (p44);
            3C-like proteinase
          Length = 7180

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 151  CCWLLLAVFFFCS 113
            CCW+L + F FCS
Sbjct: 3650 CCWILASTFLFCS 3662

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>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor|
          Length = 1161

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 52  TPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNT 153
           T   STTP    +PT  TTST  +    +TT  T
Sbjct: 218 TSTTSTTPTTSTTPTTSTTSTTSQTSTKSTTPTT 251

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>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
           (Docking protein CAIR-1)
          Length = 575

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 52  TPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPM 162
           +P RS+TP   PSP  + T  +R  +QP T   T P+
Sbjct: 279 SPARSSTPLHSPSPIRVHTVVDRP-QQPMTHRETAPV 314

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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 3/88 (3%)
 Frame = +1

Query: 52  TPLRSTTPALIPSPTVLT---TSTNRKRKQPATTNNTRPMIERARPRYYIFGMSFHPPSS 222
           TP+ S +P + P PT      T        P+  +  +P   R  P  +      H PS 
Sbjct: 189 TPIYSPSPQVQPPPTYSPPPPTHVQPTPSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSP 248

Query: 223 FRTCRXHYRRRQHRPFPCPRPWKTVERP 306
            R      RR+   P   P P    + P
Sbjct: 249 LRHLPPSPRRQPQPPTYSPPPPAYAQSP 276

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>TENA_HUMAN (P24821) Tenascin precursor (TN) (Hexabrachion) (Cytotactin)|
           (Neuronectin) (GMEM) (JI) (Miotendinous antigen)
           (Glioma-associated-extracellular matrix antigen) (GP
           150-225) (Tenascin-C) (TN-C)
          Length = 2201

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 198 AKDVVSRPCSLNHGSCVVGCC 136
           ++++   PCS  HG+CV G C
Sbjct: 248 SREICPVPCSEEHGTCVDGLC 268

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>AT7L1_HUMAN (Q9ULK2) Ataxin-7-like protein 1 (Fragment)|
          Length = 864

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
 Frame = +1

Query: 37  SRYKITPLRSTTPALIPS----PTVLTTSTNRKRKQPATTNNTRPMIERARPRYYIFGMS 204
           S +K     S  PA+IPS    P+   TS + K K  +T ++  P  ++ +P+      S
Sbjct: 599 STFKAPSAVSPIPAVIPSPSHKPSKTKTSKSSKVKDLSTRSDESPSNKKRKPQSSTSSSS 658

Query: 205 FHPPSSFRT 231
               SS +T
Sbjct: 659 SSSSSSLQT 667

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>PGCA_PIG (Q29011) Aggrecan core protein (Cartilage-specific proteoglycan|
           core protein) (CSPCP) (Fragments)
          Length = 537

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 265 PFPCPRPWKTVERPASEEPCRAQEPS 342
           PFP   P+ + +  ASEEP  +++PS
Sbjct: 488 PFPSEEPFPSEKPSASEEPFPSEQPS 513

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>NFASC_CHICK (O42414) Neurofascin precursor|
          Length = 1369

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 52   TPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMIERA 174
            TP   T P  IP+  + TT+T       +T  +T    ERA
Sbjct: 1081 TPTTETPPTEIPTTAIPTTTTTTTTTAASTVASTTTTAERA 1121

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>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase A) (Cellulase A)
          Length = 1742

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 52  TPLRSTTPALIPSPTVLTTSTNRKRKQPATTNNTRPMI 165
           TP  + TP   P+PTV  T T      P  T  + P +
Sbjct: 654 TPTPTATPTPTPTPTVTPTPTVTATPTPTPTPTSTPTV 691


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,370,317
Number of Sequences: 219361
Number of extensions: 944521
Number of successful extensions: 3608
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 3196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3573
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result