ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protei... 30 1.8
2M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kin... 29 3.1
3PA2GD_HUMAN (Q9UNK4) Group IID secretory phospholipase A2 precur... 28 5.3
4M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kin... 27 9.0
5POLG_CSFVA (P19712) Genome polyprotein [Contains: N-terminal pro... 27 9.0

>NPT2B_MOUSE (Q9DBP0) Sodium-dependent phosphate transport protein 2B|
           (Sodium/phosphate cotransporter 2B) (Na(+)/Pi
           cotransporter 2B) (Sodium-phosphate transport protein
           2B) (Na(+)-dependent phosphate cotransporter 2B)
           (NaPi-2b) (Solute carrier family 34
          Length = 697

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 324 CARVG*AVACMICTCNNALACHCLASVLDYGNEE 223
           C RV   V CM+C C     C C     D G EE
Sbjct: 621 CCRVCCRVCCMVCGCK---CCRCSKCCRDQGEEE 651



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>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine
           zipper-bearing kinase)
          Length = 966

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 20/85 (23%)
 Frame = +3

Query: 183 HPTGLPEAEKRKTVPHFHN--------------------PILKPSNGTPMHYYTYISYRL 302
           HP  + +  KRK VPH                       P   P +G+P    T  S   
Sbjct: 525 HPNAMEKLMKRKGVPHKSGMQTKRPDLLRSEGIPTTEVAPTASPLSGSPK-MSTSSSKSR 583

Query: 303 PPNQPEHN*HYSTGTHNQYASIHKN 377
             ++P H    S G+H+ +A+I KN
Sbjct: 584 YRSKPRHRRGNSRGSHSDFAAILKN 608



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>PA2GD_HUMAN (Q9UNK4) Group IID secretory phospholipase A2 precursor (EC|
           3.1.1.4) (Phosphatidylcholine 2-acylhydrolase GIID)
           (GIID sPLA2) (PLA2IID) (sPLA(2)-IID) (Secretory-type
           PLA, stroma-associated homolog)
          Length = 145

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 13/72 (18%)
 Frame = -1

Query: 387 CGFHSCVYLHTG------------YEFRWSNVNCARVG*AVACMICTCNNALACHCLASV 244
           C  H C Y H              Y F   N++C+  G      +C C+  +A  CL   
Sbjct: 64  CQTHDCCYDHLKTQGCSIYKDYYRYNFSQGNIHCSDKGSWCEQQLCACDKEVA-FCLKRN 122

Query: 243 LD-YGNEERFFF 211
           LD Y    RF++
Sbjct: 123 LDTYQKRLRFYW 134



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>M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25)
          Length = 966

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 20/85 (23%)
 Frame = +3

Query: 183 HPTGLPEAEKRKTVPHFHN--------------------PILKPSNGTPMHYYTYISYRL 302
           HP  + +  KRK VPH                       P   P +G+P    T  S   
Sbjct: 525 HPNAMEKLMKRKGVPHKSGMQTKRPDLLRSEGIPTTEVAPTASPLSGSP-KMSTSSSKSR 583

Query: 303 PPNQPEHN*HYSTGTHNQYASIHKN 377
             ++P H    S G+H+ + +I KN
Sbjct: 584 YRSKPRHRRGNSRGSHSDFVAILKN 608



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>POLG_CSFVA (P19712) Genome polyprotein [Contains: N-terminal protease (EC|
           3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
           E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
           (gp33); Envelope glycoprotein E2 (gp55); p7;
           Nonstructural protein 2
          Length = 3898

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -3

Query: 139 TFVHCVSEVSNRPTFLFCLERGKAYLLA*TYMK--CNFH 29
           T V+ V++  NRPT L   ++GK +  A T ++  CNF+
Sbjct: 387 TDVNVVTQARNRPTTLTGCKKGKNFSFAGTVIEGPCNFN 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,637,708
Number of Sequences: 219361
Number of extensions: 1199965
Number of successful extensions: 2625
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2622
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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