ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chro... 42 0.49
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.49
3gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p... 42 0.49
4dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.49
5dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.49
6gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Pa... 42 0.49
7ref|XM_479072.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.0
8gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosom... 40 2.0
9gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Canc... 40 2.0
10gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, comple... 40 2.0
11gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, comple... 40 2.0
12gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, compl... 40 2.0
13gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D... 40 2.0
14dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
16gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complet... 40 2.0
17dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
18dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
19dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
20dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
21dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.0
22dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.0
23emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in li... 40 2.0
24ref|NM_118033.2| Arabidopsis thaliana unknown protein AT4G19140 ... 38 7.7
25gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 38 7.7
26gb|DQ330564.1| Uncultured Bacteroidetes bacterium clone 08N27B 1... 38 7.7
27gb|DQ330563.1| Uncultured Bacteroidetes bacterium clone 08N26B 1... 38 7.7
28gb|DQ330555.1| Uncultured Bacteroidetes bacterium clone 08D25B 1... 38 7.7
29gb|DQ330554.1| Uncultured Bacteroidetes bacterium clone 08D24B 1... 38 7.7
30gb|DQ330544.1| Uncultured Bacteroidetes bacterium clone 09N28B 1... 38 7.7
31gb|DQ330530.1| Uncultured Bacteroidetes bacterium clone 07D2Y66 ... 38 7.7
32gb|DQ330482.1| Uncultured Bacteroidetes bacterium clone 06D232B ... 38 7.7
33gb|DQ330461.1| Uncultured Bacteroidetes bacterium clone 06D2Y70 ... 38 7.7
34gb|DQ330311.1| Uncultured Bacteroidetes bacterium clone 02D2Z86 ... 38 7.7
35gb|AC182400.3| Pan troglodytes BAC clone CH251-86D19 from chromo... 38 7.7
36gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome... 38 7.7
37gb|AF165140.3| Homo sapiens chromosome 8 clone CTA-398G7 map p12... 38 7.7
38ref|XM_447108.1| Candida glabrata CBS138, CAGL0H07161g partial mRNA 38 7.7
39gb|AC109329.8| Homo sapiens chromosome 8, clone CTD-3107M8, comp... 38 7.7
40gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, comple... 38 7.7
41gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, comple... 38 7.7
42gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, comp... 38 7.7
43gb|DQ154852.1| Uncultured bacterium clone GN01-8.052 16S ribosom... 38 7.7
44emb|CR391962.5| Zebrafish DNA sequence from clone CH211-215K15 i... 38 7.7
45gb|AC130312.3| Homo sapiens chromosome 11, clone RP11-97G1, comp... 38 7.7
46emb|AL590027.10| Human DNA sequence from clone RP11-338L17 on ch... 38 7.7
47emb|AL590814.5| Human DNA sequence from clone RP11-173O8 on chro... 38 7.7
48emb|AL163533.14| Human DNA sequence from clone RP11-114G1 on chr... 38 7.7
49emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 ... 38 7.7
50emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 38 7.7
51emb|CR380954.1| Candida glabrata strain CBS138 chromosome H comp... 38 7.7
52emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome 38 7.7
53emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, ... 38 7.7
54emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, B... 38 7.7
55gb|AF265664.1| Solanum tuberosum resistance gene cluster, comple... 38 7.7
56gb|AC091162.9| Homo sapiens chromosome 8, clone RP11-255E13, com... 38 7.7
57gb|AC011204.6| Homo sapiens, clone RP11-115P4, complete sequence 38 7.7
58gb|AC155724.8| Mus musculus 6 BAC RP24-132K20 (Roswell Park Canc... 38 7.7
59gb|AC155727.6| Mus musculus 6 BAC RP24-194N1 (Roswell Park Cance... 38 7.7
60gb|AC112227.4| Homo sapiens BAC clone RP13-552G12 from 4, comple... 38 7.7
61gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete... 38 7.7
62gb|AC150263.4| Aedes aegypti, clone XX-44H3, complete sequence 38 7.7
63gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer... 38 7.7
64gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, comple... 38 7.7
65gb|AC084013.5| Homo sapiens BAC clone RP11-169I13 from 2, comple... 38 7.7
66gb|AY085445.1| Arabidopsis thaliana clone 151921 mRNA, complete ... 38 7.7
67gb|AC155995.2| Xenopus tropicalis clone ISB1-308H5, complete seq... 38 7.7
68gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complet... 38 7.7
69emb|AJ011801.1|STU011801 Solanum tuberosum rx gene 38 7.7
70dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.7
71gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, compl... 38 7.7
72emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in... 38 7.7
73emb|AJ297551.1|HSA297551 Homo sapiens partial PIK3CB gene for ph... 38 7.7
74emb|CT030255.8| Mouse DNA sequence from clone RP23-267P22 on chr... 38 7.7
75dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CM... 38 7.7
76gb|U40411.1| Caenorhabditis elegans cosmid B0403, complete sequence 38 7.7
77emb|AL928594.11| Mouse DNA sequence from clone RP23-35H8 on chro... 38 7.7
78emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chro... 38 7.7
79emb|AL358338.3|CNS05TE9 Human chromosome 14 DNA sequence BAC C-2... 38 7.7 
>emb|AL159166.12| Human DNA sequence from clone RP3-527G5 on chromosome 6 Contains a
             putative novel gene, complete sequence
          Length = 72139

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    atttcttctatataattcagt 35
             |||||||||||||||||||||
Sbjct: 46312 atttcttctatataattcagt 46292
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 29      attcagtcttcagagaaaaaataca 53
               |||||||||||||||| ||||||||
Sbjct: 3831279 attcagtcttcagagacaaaataca 3831303



 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      ttcagtcttcagagaaaaaa 49
               ||||||||||||||||||||
Sbjct: 1826837 ttcagtcttcagagaaaaaa 1826818
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>gb|AC087091.2| Homo sapiens chromosome 3 clone RP11-605M1 map 3p, complete sequence
          Length = 153013

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    attcagtcttcagagaaaaaa 49
             |||||||||||||||||||||
Sbjct: 95258 attcagtcttcagagaaaaaa 95238
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>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1116_A06
          Length = 176062

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 29    attcagtcttcagagaaaaaataca 53
             |||||||||||||||| ||||||||
Sbjct: 87611 attcagtcttcagagacaaaataca 87635
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>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030G02
          Length = 187265

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 29    attcagtcttcagagaaaaaataca 53
             |||||||||||||||| ||||||||
Sbjct: 29750 attcagtcttcagagacaaaataca 29774
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>gb|AC011609.9|AC011609 Homo sapiens 3 BAC RP11-114K9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184680

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 29    attcagtcttcagagaaaaaa 49
             |||||||||||||||||||||
Sbjct: 83362 attcagtcttcagagaaaaaa 83342
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>ref|XM_479072.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3136

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 3    aggaataattatatttcttctata 26
            ||||||| ||||||||||||||||
Sbjct: 3135 aggaatatttatatttcttctata 3112



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 108  catattcagtttatactactgaaagacagctgcct 142
            ||||||||| || ||||||| || |||||||||||
Sbjct: 3025 catattcagcttgtactactaaatgacagctgcct 2991
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>gb|AC131667.4| Mus musculus BAC clone RP23-290D15 from chromosome 10, complete
             sequence
          Length = 196233

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 107   tcatattcagtttatactactgaa 130
             |||| |||||||||||||||||||
Sbjct: 53081 tcatgttcagtttatactactgaa 53058
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>gb|AC117474.7| Homo sapiens 3 BAC RP11-778P17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 144160

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    tactgaaagacagctgccta 143
              ||||||||||||||||||||
Sbjct: 119814 tactgaaagacagctgccta 119833
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>gb|AC093807.3| Homo sapiens BAC clone RP11-330J16 from 4, complete sequence
          Length = 171415

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tcagtttatactactgaaag 132
             ||||||||||||||||||||
Sbjct: 18541 tcagtttatactactgaaag 18560
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>gb|AC024198.7| Homo sapiens BAC clone RP11-777N19 from 4, complete sequence
          Length = 194702

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     atataattcagtcttcagagaaaa 47
              |||||||||| |||||||||||||
Sbjct: 169344 atataattcattcttcagagaaaa 169321
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>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence
          Length = 247769

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aataattatatttcttctat 25
              ||||||||||||||||||||
Sbjct: 130376 aataattatatttcttctat 130395
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>gb|AC087071.2|AC087071 Homo sapiens chromosome 7 clone RP11-775D22, complete sequence
          Length = 183353

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 27     taattcagtcttcagagaaaaaat 50
              ||||||| ||||||||||||||||
Sbjct: 141493 taattcactcttcagagaaaaaat 141470
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 3        aggaataattatatttcttctata 26
                ||||||| ||||||||||||||||
Sbjct: 24610747 aggaatatttatatttcttctata 24610770



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                   
Query: 108      catattcagtttatactactgaaagacagctgcct 142
                ||||||||| || ||||||| || |||||||||||
Sbjct: 24610857 catattcagcttgtactactaaatgacagctgcct 24610891
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 7        ataattatatttcttctata 26
                ||||||||||||||||||||
Sbjct: 24297204 ataattatatttcttctata 24297185
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>gb|AC017070.9| Homo sapiens BAC clone RP11-409F2 from 2, complete sequence
          Length = 150942

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aggaataattatatttcttc 22
             ||||||||||||||||||||
Sbjct: 85106 aggaataattatatttcttc 85125
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>dbj|AP003314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0046B10
          Length = 142596

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ataattatatttcttctata 26
              ||||||||||||||||||||
Sbjct: 121768 ataattatatttcttctata 121749
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E01
          Length = 166753

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ataattatatttcttctata 26
             ||||||||||||||||||||
Sbjct: 43108 ataattatatttcttctata 43089
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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0039M16
          Length = 133229

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 3     aggaataattatatttcttctata 26
             ||||||| ||||||||||||||||
Sbjct: 66814 aggaatatttatatttcttctata 66837



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                
Query: 108   catattcagtttatactactgaaagacagctgcct 142
             ||||||||| || ||||||| || |||||||||||
Sbjct: 66924 catattcagcttgtactactaaatgacagctgcct 66958
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0585B01
          Length = 133231

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ttcagtcttcagagaaaaaa 49
             ||||||||||||||||||||
Sbjct: 63481 ttcagtcttcagagaaaaaa 63462
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>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0018H10
          Length = 135879

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      aggaataattatatttcttctata 26
              ||||||| ||||||||||||||||
Sbjct: 104041 aggaatatttatatttcttctata 104064



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                 
Query: 108    catattcagtttatactactgaaagacagctgcct 142
              ||||||||| || ||||||| || |||||||||||
Sbjct: 104151 catattcagcttgtactactaaatgacagctgcct 104185
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>dbj|AK108836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-G10, full
            insert sequence
          Length = 1127

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 30   ttcagtcttcagagaaaaaa 49
            ||||||||||||||||||||
Sbjct: 1068 ttcagtcttcagagaaaaaa 1087
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>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7,
            complete sequence
          Length = 179577

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 24   atataattcagtcttcagagaaaa 47
            |||||||||||| |||||||||||
Sbjct: 2513 atataattcagtattcagagaaaa 2536
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>ref|NM_118033.2| Arabidopsis thaliana unknown protein AT4G19140 mRNA, complete cds
          Length = 1944

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 75  ctaagattcctaatggaaacgac 97
           |||||||||||||| ||||||||
Sbjct: 311 ctaagattcctaatagaaacgac 289
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>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 3      aggaataattatatttctt 21
              |||||||||||||||||||
Sbjct: 145371 aggaataattatatttctt 145389
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>gb|DQ330564.1| Uncultured Bacteroidetes bacterium clone 08N27B 16S ribosomal RNA
           gene, partial sequence
          Length = 891

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 256 agacagctgcctacgcaat 238
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>gb|DQ330563.1| Uncultured Bacteroidetes bacterium clone 08N26B 16S ribosomal RNA
           gene, partial sequence
          Length = 859

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 257 agacagctgcctacgcaat 239
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>gb|DQ330555.1| Uncultured Bacteroidetes bacterium clone 08D25B 16S ribosomal RNA
           gene, partial sequence
          Length = 815

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 254 agacagctgcctacgcaat 236
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>gb|DQ330554.1| Uncultured Bacteroidetes bacterium clone 08D24B 16S ribosomal RNA
           gene, partial sequence
          Length = 802

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 228 agacagctgcctacgcaat 210
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>gb|DQ330544.1| Uncultured Bacteroidetes bacterium clone 09N28B 16S ribosomal RNA
           gene, partial sequence
          Length = 830

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 244 agacagctgcctacgcaat 226
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>gb|DQ330530.1| Uncultured Bacteroidetes bacterium clone 07D2Y66 16S ribosomal RNA
           gene, partial sequence
          Length = 863

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 217 agacagctgcctacgcaat 199
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>gb|DQ330482.1| Uncultured Bacteroidetes bacterium clone 06D232B 16S ribosomal RNA
           gene, partial sequence
          Length = 944

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 306 agacagctgcctacgcaat 288
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>gb|DQ330461.1| Uncultured Bacteroidetes bacterium clone 06D2Y70 16S ribosomal RNA
           gene, partial sequence
          Length = 879

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 218 agacagctgcctacgcaat 200
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>gb|DQ330311.1| Uncultured Bacteroidetes bacterium clone 02D2Z86 16S ribosomal RNA
           gene, partial sequence
          Length = 1370

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 719 agacagctgcctacgcaat 701
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>gb|AC182400.3| Pan troglodytes BAC clone CH251-86D19 from chromosome 8, complete
              sequence
          Length = 150420

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     gaaaaaatacaaagggtta 61
              |||||||||||||||||||
Sbjct: 142049 gaaaaaatacaaagggtta 142031
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>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete sequence
          Length = 207537

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 9      aattatatttcttctatat 27
              |||||||||||||||||||
Sbjct: 195219 aattatatttcttctatat 195201
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>gb|AF165140.3| Homo sapiens chromosome 8 clone CTA-398G7 map p12, complete sequence
          Length = 114898

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    agtcttcagagaaaaaata 51
             |||||||||||||||||||
Sbjct: 27954 agtcttcagagaaaaaata 27936
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>ref|XM_447108.1| Candida glabrata CBS138, CAGL0H07161g partial mRNA
          Length = 1275

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 139  gcctacgcaatttccattg 157
            |||||||||||||||||||
Sbjct: 1180 gcctacgcaatttccattg 1198
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>gb|AC109329.8| Homo sapiens chromosome 8, clone CTD-3107M8, complete sequence
          Length = 215644

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     agtcttcagagaaaaaata 51
              |||||||||||||||||||
Sbjct: 208289 agtcttcagagaaaaaata 208271
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>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence
          Length = 229072

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 36     cttcagagaaaaaatacaa 54
              |||||||||||||||||||
Sbjct: 210941 cttcagagaaaaaatacaa 210923
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>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence
          Length = 149990

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 9     aattatatttcttctatat 27
             |||||||||||||||||||
Sbjct: 45931 aattatatttcttctatat 45913
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>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence
          Length = 224790

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     cttcagagaaaaaatacaa 54
              |||||||||||||||||||
Sbjct: 178830 cttcagagaaaaaatacaa 178848
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>gb|DQ154852.1| Uncultured bacterium clone GN01-8.052 16S ribosomal RNA gene,
           partial sequence
          Length = 1500

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 agacagctgcctacgcaat 149
           |||||||||||||||||||
Sbjct: 729 agacagctgcctacgcaat 711
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>emb|CR391962.5| Zebrafish DNA sequence from clone CH211-215K15 in linkage group 16,
              complete sequence
          Length = 144859

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 6      aataattatatttcttctatata 28
              |||||||||||||||| ||||||
Sbjct: 137193 aataattatatttcttttatata 137215
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>gb|AC130312.3| Homo sapiens chromosome 11, clone RP11-97G1, complete sequence
          Length = 161367

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    gtcttcagagaaaaaatacaaag 56
             ||||||||||||||| |||||||
Sbjct: 75938 gtcttcagagaaaaactacaaag 75916
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>emb|AL590027.10| Human DNA sequence from clone RP11-338L17 on chromosome 13, complete
             sequence
          Length = 68556

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    tcttctatataattcagtc 36
             |||||||||||||||||||
Sbjct: 20905 tcttctatataattcagtc 20923
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>emb|AL590814.5| Human DNA sequence from clone RP11-173O8 on chromosome 6 Contains a
             ribosomal protein L5 (RPL5) pseudogene, complete sequence
          Length = 162540

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    ttcagagaaaaaatacaaa 55
             |||||||||||||||||||
Sbjct: 86899 ttcagagaaaaaatacaaa 86881
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>emb|AL163533.14| Human DNA sequence from clone RP11-114G1 on chromosome 13q31.3-33.1
              Contains a Sp3 transcription factor (SP3) pseudogene and a
              novel gene, complete sequence
          Length = 153592

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 27     taattcagtcttcagagaaaaaa 49
              |||||||||||||| ||||||||
Sbjct: 142322 taattcagtcttcacagaaaaaa 142300
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>emb|CR759918.11| Zebrafish DNA sequence from clone CH211-278M11 in linkage group 15,
              complete sequence
          Length = 160374

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     aaaaatacaaagggttaca 63
              |||||||||||||||||||
Sbjct: 148472 aaaaatacaaagggttaca 148454
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
               hansenii
          Length = 2051428

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 12      tatatttcttctatataat 30
               |||||||||||||||||||
Sbjct: 1519128 tatatttcttctatataat 1519146
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>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence
          Length = 1050361

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 139    gcctacgcaatttccattg 157
              |||||||||||||||||||
Sbjct: 704918 gcctacgcaatttccattg 704900
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>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome
          Length = 1581384

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 37     ttcagagaaaaaatacaaa 55
              |||||||||||||||||||
Sbjct: 241134 ttcagagaaaaaatacaaa 241116
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>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50
          Length = 199382

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 75    ctaagattcctaatggaaacgac 97
             |||||||||||||| ||||||||
Sbjct: 54038 ctaagattcctaatagaaacgac 54016
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>emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, BAC clone T18B16 (ESSA project)
          Length = 96574

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 75    ctaagattcctaatggaaacgac 97
             |||||||||||||| ||||||||
Sbjct: 37599 ctaagattcctaatagaaacgac 37577
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>gb|AF265664.1| Solanum tuberosum resistance gene cluster, complete sequence
          Length = 187352

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 40     agagaaaaaatacaaaggg 58
              |||||||||||||||||||
Sbjct: 124854 agagaaaaaatacaaaggg 124872



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    agagaaaaaatacaaaggg 58
             |||||||||||||||||||
Sbjct: 58660 agagaaaaaatacaaaggg 58678
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>gb|AC091162.9| Homo sapiens chromosome 8, clone RP11-255E13, complete sequence
          Length = 149697

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    gaaaaaatacaaagggtta 61
             |||||||||||||||||||
Sbjct: 73701 gaaaaaatacaaagggtta 73719
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>gb|AC011204.6| Homo sapiens, clone RP11-115P4, complete sequence
          Length = 155926

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    agtcttcagagaaaaaata 51
             |||||||||||||||||||
Sbjct: 52003 agtcttcagagaaaaaata 51985
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>gb|AC155724.8| Mus musculus 6 BAC RP24-132K20 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 196715

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 89  ggaaacgactatcaacagtcata 111
           |||||| ||||||||||||||||
Sbjct: 878 ggaaacaactatcaacagtcata 900
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>gb|AC155727.6| Mus musculus 6 BAC RP24-194N1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 199400

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 89    ggaaacgactatcaacagtcata 111
             |||||| ||||||||||||||||
Sbjct: 36702 ggaaacaactatcaacagtcata 36680
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>gb|AC112227.4| Homo sapiens BAC clone RP13-552G12 from 4, complete sequence
          Length = 151609

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 15     atttcttctatataattcagtct 37
              ||||||||||| |||||||||||
Sbjct: 141283 atttcttctatttaattcagtct 141261
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>gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete sequence
          Length = 159875

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   ttctatataattcagtctt 38
            |||||||||||||||||||
Sbjct: 8338 ttctatataattcagtctt 8320
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>gb|AC150263.4| Aedes aegypti, clone XX-44H3, complete sequence
          Length = 131682

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 115    agtttatactactgaaaga 133
              |||||||||||||||||||
Sbjct: 103636 agtttatactactgaaaga 103618
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>gb|AC117389.5| Homo sapiens 3 BAC RP11-27H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111104

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 12    tatatttcttctatataat 30
             |||||||||||||||||||
Sbjct: 62814 tatatttcttctatataat 62796
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>gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, complete sequence
          Length = 132644

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 8     taattatatttcttctata 26
             |||||||||||||||||||
Sbjct: 39031 taattatatttcttctata 39013
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>gb|AC084013.5| Homo sapiens BAC clone RP11-169I13 from 2, complete sequence
          Length = 105604

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 119   tatactactgaaagacagctgcc 141
             ||||||||||||| |||||||||
Sbjct: 32614 tatactactgaaatacagctgcc 32636
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>gb|AY085445.1| Arabidopsis thaliana clone 151921 mRNA, complete sequence
          Length = 1167

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 75  ctaagattcctaatggaaacgac 97
           |||||||||||||| ||||||||
Sbjct: 310 ctaagattcctaatagaaacgac 288
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>gb|AC155995.2| Xenopus tropicalis clone ISB1-308H5, complete sequence
          Length = 92686

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 7     ataattatatttcttctat 25
             |||||||||||||||||||
Sbjct: 79512 ataattatatttcttctat 79530
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>gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complete sequence
          Length = 134841

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    agaaaaaatacaaagggtt 60
             |||||||||||||||||||
Sbjct: 79975 agaaaaaatacaaagggtt 79957
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>emb|AJ011801.1|STU011801 Solanum tuberosum rx gene
          Length = 18284

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  agagaaaaaatacaaaggg 58
           |||||||||||||||||||
Sbjct: 230 agagaaaaaatacaaaggg 212
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>dbj|AK066770.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088M15, full
            insert sequence
          Length = 3135

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 4    ggaataattatatttcttctata 26
            |||||| ||||||||||||||||
Sbjct: 3133 ggaatatttatatttcttctata 3111



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Minus

                                               
Query: 108  catattcagtttatactactgaaagacagctgcct 142
            ||||||||| || ||||||| || |||||||||||
Sbjct: 3024 catattcagcttgtactactaaatgacagctgcct 2990
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>gb|AC152415.4| Mus musculus BAC clone RP23-359F16 from 10, complete sequence
          Length = 195249

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 112    ttcagtttatactactgaaagac 134
              ||||||||||||| |||||||||
Sbjct: 114955 ttcagtttatacttctgaaagac 114933
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>emb|CR388144.17| Zebrafish DNA sequence from clone DKEY-21I17 in linkage group 14,
             complete sequence
          Length = 211706

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 6     aataattatatttcttcta 24
             |||||||||||||||||||
Sbjct: 88027 aataattatatttcttcta 88045
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>emb|AJ297551.1|HSA297551 Homo sapiens partial PIK3CB gene for phosphatidylinositol 3-kinase
            catalytic subunit p110beta, exons 4-6
          Length = 10401

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 12   tatatttcttctatataat 30
            |||||||||||||||||||
Sbjct: 6621 tatatttcttctatataat 6603
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>emb|CT030255.8| Mouse DNA sequence from clone RP23-267P22 on chromosome 16, complete
             sequence
          Length = 178284

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    ttcagagaaaaaatacaaa 55
             |||||||||||||||||||
Sbjct: 95278 ttcagagaaaaaatacaaa 95260
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>dbj|AP000623.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-71P3, complete
             sequence
          Length = 121627

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 6     aataattatatttcttctatata 28
             |||||||||||||||| ||||||
Sbjct: 53806 aataattatatttcttttatata 53828
to top
>gb|U40411.1| Caenorhabditis elegans cosmid B0403, complete sequence
          Length = 42810

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     aggaataattatatttctt 21
             |||||||||||||||||||
Sbjct: 14219 aggaataattatatttctt 14237
to top
>emb|AL928594.11| Mouse DNA sequence from clone RP23-35H8 on chromosome X, complete
             sequence
          Length = 204635

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 117   tttatactactgaaagaca 135
             |||||||||||||||||||
Sbjct: 84498 tttatactactgaaagaca 84480
to top
>emb|AL731665.23| Mouse DNA sequence from clone RP23-62L9 on chromosome 4, complete
            sequence
          Length = 160873

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 38   tcagagaaaaaatacaaagggtt 60
            |||||| ||||||||||||||||
Sbjct: 4735 tcagagtaaaaatacaaagggtt 4713
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>emb|AL358338.3|CNS05TE9 Human chromosome 14 DNA sequence BAC C-2082C19 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 138225

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 66    tactagtggctaagattcctaat 88
             ||||||||||||||||| |||||
Sbjct: 55238 tactagtggctaagattactaat 55260


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,956,841
Number of Sequences: 3902068
Number of extensions: 2956841
Number of successful extensions: 162072
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 161690
Number of HSP's gapped (non-prelim): 382
length of query: 160
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 138
effective length of database: 17,147,199,772
effective search space: 2366313568536
effective search space used: 2366313568536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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