>gb|AC113501.7| Mus musculus chromosome 6, clone RP23-367E20, complete sequence
          Length = 196932

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   aaacagaaatgaatatgtaca 189
             |||||||||||||||||||||
Sbjct: 44117 aaacagaaatgaatatgtaca 44097

>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gggccatgaaatggaagcgg 212
              ||||||||||||||||||||
Sbjct: 408258 gggccatgaaatggaagcgg 408277

>gb|AC102523.9| Mus musculus chromosome 15, clone RP24-184F9, complete sequence
          Length = 171422

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   cctcacatgattcaagtaaa 130
             ||||||||||||||||||||
Sbjct: 10758 cctcacatgattcaagtaaa 10739

>gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome 14, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gtacagatgggccatgaaat 204
             ||||||||||||||||||||
Sbjct: 23736 gtacagatgggccatgaaat 23755

>gb|AC003080.1| Homo sapiens BAC clone GS1-368F15 from 7, complete sequence
          Length = 179531

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      aaacaaatgattttattaaacaaa 31
              |||||||| |||||||||||||||
Sbjct: 116912 aaacaaattattttattaaacaaa 116935

>gb|AC123675.7| Mus musculus chromosome 15, clone RP23-271I6, complete sequence
          Length = 233422

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     atgattttattaaacaaagc 33
              ||||||||||||||||||||
Sbjct: 174503 atgattttattaaacaaagc 174484

>emb|AL158194.16| Human DNA sequence from clone RP11-429E17 on chromosome 13q13.1-14.2
             Contains part of the LHFP gene for lipoma HMGIC fusion
             partner, complete sequence
          Length = 177019

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   taaacagaaatgaatatgta 187
             ||||||||||||||||||||
Sbjct: 44752 taaacagaaatgaatatgta 44733

>emb|AL136088.10| Human DNA sequence from clone RP5-1024C24 on chromosome 11p13-14.1
             Contains the C11ORF8 gene, ESTs, STSs, GSSs and a CpG
             island, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   catgaaatattgaaggaccc 164
             ||||||||||||||||||||
Sbjct: 14901 catgaaatattgaaggaccc 14920

>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aaacaaatgattttattaaa 27
              ||||||||||||||||||||
Sbjct: 605497 aaacaaatgattttattaaa 605516

>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aaacaaatgattttattaaa 27
              ||||||||||||||||||||
Sbjct: 601364 aaacaaatgattttattaaa 601383

>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aaacaaatgattttattaaa 27
              ||||||||||||||||||||
Sbjct: 625653 aaacaaatgattttattaaa 625672

>gb|AC127902.2| Homo sapiens 3 BAC RP11-1H2 (Roswell Park Cancer Institute Human BAC
            Library) complete sequence
          Length = 11240

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 1    aactgccaaacaaatgattttatt 24
            ||||||||||||||| ||||||||
Sbjct: 6369 aactgccaaacaaattattttatt 6392

>gb|AC112910.3| Homo sapiens 3 BAC RP11-273F12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115927

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     caaacaaatgattttattaa 26
             ||||||||||||||||||||
Sbjct: 69121 caaacaaatgattttattaa 69102

>gb|AC093795.3| Homo sapiens BAC clone RP11-299P3 from 4, complete sequence
          Length = 183917

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     aaatgattttattaaacaaa 31
              ||||||||||||||||||||
Sbjct: 169991 aaatgattttattaaacaaa 170010

>gb|AY071362.1| Drosophila melanogaster RE39562 full length cDNA
          Length = 948

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 8   aaacaaatgattttattaaacaaa 31
           ||||||| ||||||||||||||||
Sbjct: 912 aaacaaacgattttattaaacaaa 935

>gb|AC160050.2| Mus musculus BAC clone RP24-467L17 from chromosome 9, complete sequence
          Length = 158502

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   caagttggttagaagtgggt 272
             ||||||||||||||||||||
Sbjct: 48796 caagttggttagaagtgggt 48777

>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence,
            complete sequence
          Length = 90721

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 70   ataacatcaggtcgaattattcaa 93
            ||||||||||||| ||||||||||
Sbjct: 3079 ataacatcaggtcaaattattcaa 3102

>gb|AC074395.1|AC074395 Arabidopsis thaliana chromosome 3 BAC T8G24 genomic sequence, complete
             sequence
          Length = 29605

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    ataacatcaggtcgaattattcaa 93
             ||||||||||||| ||||||||||
Sbjct: 27642 ataacatcaggtcaaattattcaa 27665

>gb|U39667.1| Caenorhabditis elegans cosmid C18A11, complete sequence
          Length = 43449

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aaacaaatgattttattaaa 27
             ||||||||||||||||||||
Sbjct: 14330 aaacaaatgattttattaaa 14311

>emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chromosome X, complete
             sequence
          Length = 181854

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   aaatgaatatgtacagatgg 194
             ||||||||||||||||||||
Sbjct: 86548 aaatgaatatgtacagatgg 86529

>emb|AL807747.10| Mouse DNA sequence from clone RP23-300N21 on chromosome 4, complete
              sequence
          Length = 228003

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    ttagaagtgggtggtagttt 280
              ||||||||||||||||||||
Sbjct: 219623 ttagaagtgggtggtagttt 219604

>gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complete sequence
          Length = 209929

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 253    caagttggttagaagtgggt 272
              ||||||||||||||||||||
Sbjct: 198531 caagttggttagaagtgggt 198550

>gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome 14, complete sequence
          Length = 255753

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    gtacagatgggccatgaaat 204
              ||||||||||||||||||||
Sbjct: 132860 gtacagatgggccatgaaat 132841

>emb|AL772288.12| Mouse DNA sequence from clone RP23-360H6 on chromosome 4, complete
             sequence
          Length = 132015

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     actgccaaacaaatgatttt 21
             ||||||||||||||||||||
Sbjct: 22481 actgccaaacaaatgatttt 22500


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,856,384
Number of Sequences: 3902068
Number of extensions: 2856384
Number of successful extensions: 56247
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56177
Number of HSP's gapped (non-prelim): 70
length of query: 281
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 259
effective length of database: 17,147,199,772
effective search space: 4441124740948
effective search space used: 4441124740948
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)