>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 272     ctacacaaacctaaaaaggaacaacatatggcaact 307
               ||||||||||||| || ||||| |||||||||||||
Sbjct: 7452628 ctacacaaacctagaatggaaccacatatggcaact 7452593

>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0071C04, from chromosome 3, complete sequence
          Length = 126078

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 272   ctacacaaacctaaaaaggaacaacatatggcaact 307
             ||||||||||||| || ||||| |||||||||||||
Sbjct: 91183 ctacacaaacctagaatggaaccacatatggcaact 91148

>emb|AL157830.10| Human DNA sequence from clone RP11-332M12 on chromosome 9p24.1-24.3,
             complete sequence
          Length = 168621

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 95    aaattaagtcaaatggattaacaa 118
             ||||||||||||||||||||||||
Sbjct: 31004 aaattaagtcaaatggattaacaa 31027

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 272     ctacacaaacctaaaaaggaacaacatatggcaact 307
               ||||||||||||| || ||||| |||||||||||||
Sbjct: 7450463 ctacacaaacctagaatggaaccacatatggcaact 7450428

>dbj|AK064767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A02, full
            insert sequence
          Length = 2755

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 272  ctacacaaacctaaaaaggaacaacatatggcaact 307
            ||||||||||||| || ||||| |||||||||||||
Sbjct: 2572 ctacacaaacctagaatggaaccacatatggcaact 2537

>dbj|AK058297.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F05, full
           insert sequence
          Length = 1130

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 272 ctacacaaacctaaaaaggaacaacatatggcaact 307
           ||||||||||||| || ||||| |||||||||||||
Sbjct: 927 ctacacaaacctagaatggaaccacatatggcaact 892

>gb|AC145941.2| Pan troglodytes BAC clone RP43-40O7 from 7, complete sequence
          Length = 172479

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 93     aaaaattaagtcaaatggattaacaac 119
              ||||||||| |||||||||||||||||
Sbjct: 114340 aaaaattaactcaaatggattaacaac 114366

>gb|AC147288.4| Pan troglodytes BAC clone RP43-74L22 from chromosome 7, complete sequence
          Length = 140079

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 93     aaaaattaagtcaaatggattaacaac 119
              ||||||||| |||||||||||||||||
Sbjct: 114124 aaaaattaactcaaatggattaacaac 114150

>gb|AC004452.1|AC004452 Homo sapiens PAC clone RP4-799L20 from 7p21, complete sequence
          Length = 82230

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 93    aaaaattaagtcaaatggattaacaac 119
             ||||||||| |||||||||||||||||
Sbjct: 47449 aaaaattaactcaaatggattaacaac 47475

>emb|AL360078.16| Human DNA sequence from clone RP11-530N10 on chromosome 20 Contains
            the DEFB126 gene for defensin beta 126, the DEFB127 gene
            for defensin beta 127, the DEFB129 gene for defensin beta
            129, the DEFB125 gene for defensin beta 125 and the
            DEFB128 gene for defensin beta 128, complete sequence
          Length = 164123

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 90   acaaaaaattaagtcaaatggattaa 115
            |||||| |||||||||||||||||||
Sbjct: 4712 acaaaacattaagtcaaatggattaa 4687

>emb|AL833788.9| Mouse DNA sequence from clone RP23-99E6 on chromosome X, complete
              sequence
          Length = 167868

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 155    aacaacaaaaatcctggaaacaaag 179
              ||||| |||||||||||||||||||
Sbjct: 120843 aacaaaaaaaatcctggaaacaaag 120867

>gb|AC067747.7| Homo sapiens chromosome 10 clone RP11-406H21, complete sequence
          Length = 147280

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 152    tgaaacaacaaaaatcctgga 172
              |||||||||||||||||||||
Sbjct: 106534 tgaaacaacaaaaatcctgga 106514

>gb|AC079258.4| Homo sapiens BAC clone RP11-410J22 from 2, complete sequence
          Length = 169408

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 83     cttggaaacaaaaaattaagtcaaa 107
              ||||||||||||||||||| |||||
Sbjct: 134064 cttggaaacaaaaaattaaatcaaa 134040

>emb|AL808132.5| Mouse DNA sequence from clone RP23-125A12 on chromosome X, complete
              sequence
          Length = 201114

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    tctcctacttcccctttacct 262
              |||||||||||||||||||||
Sbjct: 162439 tctcctacttcccctttacct 162459

>gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 154964

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   aaaaattaagtcaaatggat 112
            ||||||||||||||||||||
Sbjct: 3877 aaaaattaagtcaaatggat 3858

>emb|AL591409.3| Human DNA sequence from clone RP11-161K18 on chromosome X, complete
              sequence
          Length = 133516

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     aaaaaattaagtcaaatggattaa 115
              |||||||||| |||||||||||||
Sbjct: 101052 aaaaaattaaatcaaatggattaa 101075

>emb|AL358074.22| Human DNA sequence from clone RP11-423C15 on chromosome 9 Contains the
             5' end of the MAPKAP1 gene for mitogen-activated protein
             kinase associated protein 1, a novel gene, the 5' end of
             the PBX3 gene for pre-B-cell leukemia transcription factor
             3 and three CpG islands, complete sequence
          Length = 109081

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 93    aaaaattaagtcaaatggattaac 116
             ||||||||| ||||||||||||||
Sbjct: 93831 aaaaattaactcaaatggattaac 93808

>gb|AC125418.3| Homo sapiens chromosome 15, clone CTD-3114C7, complete sequence
          Length = 75059

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    gctgtccgcttggaaacaaa 94
             ||||||||||||||||||||
Sbjct: 43796 gctgtccgcttggaaacaaa 43815

>gb|AC087238.25| Homo sapiens 12 BAC RP11-174M10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175998

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    aaaaaattaagtcaaatggattaa 115
             |||||||||| |||||||||||||
Sbjct: 43167 aaaaaattaaatcaaatggattaa 43144

>gb|AC012378.10| Homo sapiens chromosome 15 clone RP11-420M1 map 15q21.3, complete
             sequence
          Length = 199289

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    taagtcaaatggattaacaa 118
             ||||||||||||||||||||
Sbjct: 85858 taagtcaaatggattaacaa 85877

>gb|AC008147.31| Homo sapiens 12 BAC RP3-405J10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115345

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    aaaaattaagtcaaatggat 112
             ||||||||||||||||||||
Sbjct: 63020 aaaaattaagtcaaatggat 63039

>gb|AC079298.8| Homo sapiens BAC clone RP11-9N12 from 4, complete sequence
          Length = 200822

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 92    aaaaaattaagtcaaatggattaa 115
             |||||||||| |||||||||||||
Sbjct: 66294 aaaaaattaattcaaatggattaa 66271

>gb|AC093159.3| Homo sapiens BAC clone RP11-642D6 from 2, complete sequence
          Length = 186561

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   gattaacaacaccacagaag 129
             ||||||||||||||||||||
Sbjct: 44495 gattaacaacaccacagaag 44476

>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2
          Length = 180000

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   gctgtccgcttggaaacaaa 94
            ||||||||||||||||||||
Sbjct: 8803 gctgtccgcttggaaacaaa 8822

>gb|AC013719.8| Homo sapiens BAC clone RP11-270E5 from 2, complete sequence
          Length = 152996

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 92   aaaaaattaagtcaaatggattaa 115
            |||||||||| |||||||||||||
Sbjct: 8336 aaaaaattaactcaaatggattaa 8313

>gb|AC022308.17|AC022308 Homo sapiens chromosome 15 clone RP11-34L4, complete sequence
          Length = 166226

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gctgtccgcttggaaacaaa 94
              ||||||||||||||||||||
Sbjct: 123673 gctgtccgcttggaaacaaa 123692

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      gctgtccgcttggaaacaaa 94
               ||||||||||||||||||||
Sbjct: 1887288 gctgtccgcttggaaacaaa 1887307

>dbj|BS000047.1| Pan troglodytes chromosome 22 clone:PTB-109H19, map 22, complete
              sequences
          Length = 214118

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     aaaaattaagtcaaatggat 112
              ||||||||||||||||||||
Sbjct: 124554 aaaaattaagtcaaatggat 124573


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,997,173
Number of Sequences: 3902068
Number of extensions: 3997173
Number of successful extensions: 79226
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79120
Number of HSP's gapped (non-prelim): 106
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)