ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet... 799 0.0
2gb|AF176226.1|AF176226 Triticum aestivum COP alpha homolog mRNA,... 82 2e-12
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 76 1e-10
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
5gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033... 76 1e-10
6dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
7dbj|AK059218.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
8ref|XM_469513.1| Oryza sativa (japonica cultivar-group), mRNA 74 4e-10
9ref|XM_450153.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
11dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
12dbj|AK105672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
13dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
14dbj|AK058402.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
15gb|AY104039.1| Zea mays PCO096800 mRNA sequence 46 0.093
16gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, co... 42 1.5
17gb|AC005021.1| Homo sapiens BAC clone GS1-293C5 from 7, complete... 40 5.7
18gb|AC079059.10| Homo sapiens chromosome 18, clone RP11-281L12, c... 40 5.7
19gb|AC021594.9| Homo sapiens, clone RP11-154H12, complete sequence 40 5.7
20gb|AC109636.3| Homo sapiens BAC clone RP11-19D21 from 4, complet... 40 5.7
21gb|AY210982.1| Homo sapiens paraoxonase 2 (PON2) gene, complete cds 40 5.7
22ref|XM_308807.2| Anopheles gambiae str. PEST ENSANGP00000021654 ... 40 5.7

>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  799 bits (403), Expect = 0.0
 Identities = 418/423 (98%)
 Strand = Plus / Plus

                                                                        
Query: 5    aaaaatctctggtaggtagaatataactgacacaacagtcttcgaactggagatacaaac 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  aaaaatctctggtaggtagaatataactgacacaacagtcttcgaactggagatacaaac 899

                                                                        
Query: 65   atgatgaacacggaggtgaagccacaatagtcgtcgccgccacttatcttatctcgattg 124
            ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 900  atgatgaacacggaggtgaagccacaatagtcgtcgttgccacttatcttatctcgattg 959

                                                                        
Query: 125  tgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgagagctcgcatatgct 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  tgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgagagctcgcatatgct 1019

                                                                        
Query: 185  gcacagctgaccctcgactgagggcacgaaccgggacgcgcagtaggggcaggagacgtc 244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gcacagctgaccctcgactgagggcacgaaccgggacgcgcagtaggggcaggagacgtc 1079

                                                                        
Query: 245  cttctgcccgcggtagatcgggacaaaggttgccccgcagacgacgaacgggtttctgaa 304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 cttctgcccgcggtagatcgggacaaaggttgccccgcagacgacgaacgggtttctgaa 1139

                                                                        
Query: 305  gtcgtagttcagccggtgggcgtccttcctgtcaccgcaggcctgcaggacctgtcgggc 364
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 gtcgtagttcagctggtgggcgtccttcctgtcaccgcaggcctgcaggacctgtcgggc 1199

                                                                        
Query: 365  cttcttcgcctgggcctcgttcgggccgttgtccaggagcatgcgggcaaagtttgccgc 424
            |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1200 cttctttgcctgggcctcgttcgggccattgtccaggagcatgcgggcaaagtttgccgc 1259

               
Query: 425  ggt 427
            |||
Sbjct: 1260 ggt 1262



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>gb|AF176226.1|AF176226 Triticum aestivum COP alpha homolog mRNA, partial cds
          Length = 1826

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 155/193 (80%)
 Strand = Plus / Minus

                                                                        
Query: 121  attgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgagagctcgcata 180
            |||||||||||||||| |||||||| ||||||||||| |||||||| |  ||||||||||
Sbjct: 1591 attgtgtaggggagcacaggaggcccgaggcgtccgcgccgaccacagccagctcgcata 1532

                                                                        
Query: 181  tgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtaggggcaggaga 240
            || | || ||||| || || |     || || ||||||||  ||||||| | ||| ||||
Sbjct: 1531 tggtacaaagctgcccttcaatgttaggaacaaaccgggatccgcagtatgcgcacgaga 1472

                                                                        
Query: 241  cgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacgaacgggtttc 300
              ||||| || ||||||||||| || ||| | || |  || |||||||||||||| ||||
Sbjct: 1471 tatccttttggccgcggtagatgggaacatacgtcgagccacagacgacgaacggatttc 1412

                         
Query: 301  tgaagtcgtagtt 313
            || ||||||||||
Sbjct: 1411 tgtagtcgtagtt 1399



 Score = 40.1 bits (20), Expect = 5.7
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 354  acctgtcgggccttcttcgcctgggcctcgttcgggccgttgtccaggagca 405
            ||||| || ||||||||||| ||| ||||||| |||| ||| || |||||||
Sbjct: 1358 acctgccgagccttcttcgcttggacctcgttggggctgttctcgaggagca 1307



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 164/206 (79%)
 Strand = Plus / Plus

                                                                            
Query: 112      cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
                |||||||||| || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 28424885 cttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaa 28424944

                                                                            
Query: 172      gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
                |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 28424945 gctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacg 28425004

                                                                            
Query: 232      ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
                ||||||| || |||||||| || |||||||| || ||| | || || || ||||| || |
Sbjct: 28425005 ggcaggaaacatccttctggccacggtagattggaacatacgtggcgccacagacaacaa 28425064

                                          
Query: 292      acgggtttctgaagtcgtagttcagc 317
                | || |||||| |||| |||||||||
Sbjct: 28425065 atggatttctgtagtcatagttcagc 28425090



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 164/206 (79%)
 Strand = Plus / Plus

                                                                            
Query: 112      cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
                |||||||||| || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 28516209 cttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaa 28516268

                                                                            
Query: 172      gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
                |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 28516269 gctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacg 28516328

                                                                            
Query: 232      ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
                ||||||| || |||||||| || |||||||| || ||| | || || || ||||| || |
Sbjct: 28516329 ggcaggaaacatccttctggccacggtagattggaacatacgtggcgccacagacaacaa 28516388

                                          
Query: 292      acgggtttctgaagtcgtagttcagc 317
                | || |||||| |||| |||||||||
Sbjct: 28516389 atggatttctgtagtcatagttcagc 28516414



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>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 164/206 (79%)
 Strand = Plus / Plus

                                                                         
Query: 112   cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
             |||||||||| || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 19015 cttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaa 19074

                                                                         
Query: 172   gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
             |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 19075 gctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacg 19134

                                                                         
Query: 232   ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
             ||||||| || |||||||| || |||||||| || ||| | || || || ||||| || |
Sbjct: 19135 ggcaggaaacatccttctggccacggtagattggaacatacgtggcgccacagacaacaa 19194

                                       
Query: 292   acgggtttctgaagtcgtagttcagc 317
             | || |||||| |||| |||||||||
Sbjct: 19195 atggatttctgtagtcatagttcagc 19220



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>dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G08, full
            insert sequence
          Length = 4221

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 164/206 (79%)
 Strand = Plus / Minus

                                                                        
Query: 112  cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
            |||||||||| || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 3802 cttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaa 3743

                                                                        
Query: 172  gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
            |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 3742 gctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacg 3683

                                                                        
Query: 232  ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
            ||||||| || |||||||| || |||||||| || ||| | || || || ||||| || |
Sbjct: 3682 ggcaggaaacatccttctggccacggtagattggaacatacgtggcgccacagacaacaa 3623

                                      
Query: 292  acgggtttctgaagtcgtagttcagc 317
            | || |||||| |||| |||||||||
Sbjct: 3622 atggatttctgtagtcatagttcagc 3597



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>dbj|AK059218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C10, full
           insert sequence
          Length = 1032

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 164/206 (79%)
 Strand = Plus / Minus

                                                                       
Query: 112 cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
           |||||||||| || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 906 cttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaa 847

                                                                       
Query: 172 gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
           |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 846 gctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacg 787

                                                                       
Query: 232 ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
           ||||||| || |||||||| || |||||||| || ||| | || || || ||||| || |
Sbjct: 786 ggcaggaaacatccttctggccacggtagattggaacatacgtggcgccacagacaacaa 727

                                     
Query: 292 acgggtttctgaagtcgtagttcagc 317
           | || |||||| |||| |||||||||
Sbjct: 726 atggatttctgtagtcatagttcagc 701



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>ref|XM_469513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3657

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 163/205 (79%)
 Strand = Plus / Minus

                                                                        
Query: 113  ttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgagag 172
            ||||||||| || ||||||||||||||||||||||| || || || || ||||| |  ||
Sbjct: 3657 ttatctcgactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacggcaag 3598

                                                                        
Query: 173  ctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtaggg 232
            ||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| ||
Sbjct: 3597 ctcacatatggtacaaagctgcccttcgatcgaaggaacaaaccgggagccacagtacgg 3538

                                                                        
Query: 233  gcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacgaa 292
            |||||| || |||||||| || |||||||| || ||| | || || || ||||| || ||
Sbjct: 3537 gcaggaaacatccttctggccacggtagattggaacatacgtggcgccacagacaacaaa 3478

                                     
Query: 293  cgggtttctgaagtcgtagttcagc 317
             || |||||| |||| |||||||||
Sbjct: 3477 tggatttctgtagtcatagttcagc 3453



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>ref|XM_450153.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1736

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 163/206 (79%)
 Strand = Plus / Minus

                                                                        
Query: 112  cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
            |||||||| | || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 1516 cttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaa 1457

                                                                        
Query: 172  gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
            |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 1456 gctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacg 1397

                                                                        
Query: 232  ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
            ||||||| || |||||||| || ||||| || || ||| | || || || |||||||| |
Sbjct: 1396 ggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaa 1337

                                      
Query: 292  acgggtttctgaagtcgtagttcagc 317
            | || |||||| |||| |||||||||
Sbjct: 1336 atggatttctgtagtcatagttcagc 1311



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 163/206 (79%)
 Strand = Plus / Plus

                                                                           
Query: 112     cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
               |||||||| | || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 2074192 cttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaa 2074251

                                                                           
Query: 172     gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
               |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 2074252 gctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacg 2074311

                                                                           
Query: 232     ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
               ||||||| || |||||||| || ||||| || || ||| | || || || |||||||| |
Sbjct: 2074312 ggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaa 2074371

                                         
Query: 292     acgggtttctgaagtcgtagttcagc 317
               | || |||||| |||| |||||||||
Sbjct: 2074372 atggatttctgtagtcatagttcagc 2074397



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>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1352_A10
          Length = 111655

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 163/206 (79%)
 Strand = Plus / Plus

                                                                          
Query: 112    cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
              |||||||| | || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 109559 cttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaa 109618

                                                                          
Query: 172    gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
              |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 109619 gctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacg 109678

                                                                          
Query: 232    ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
              ||||||| || |||||||| || ||||| || || ||| | || || || |||||||| |
Sbjct: 109679 ggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaa 109738

                                        
Query: 292    acgggtttctgaagtcgtagttcagc 317
              | || |||||| |||| |||||||||
Sbjct: 109739 atggatttctgtagtcatagttcagc 109764



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>dbj|AK105672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A08, full
            insert sequence
          Length = 3045

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 163/206 (79%)
 Strand = Plus / Minus

                                                                        
Query: 112  cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
            |||||||| | || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 2581 cttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaa 2522

                                                                        
Query: 172  gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
            |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 2521 gctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacg 2462

                                                                        
Query: 232  ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
            ||||||| || |||||||| || ||||| || || ||| | || || || |||||||| |
Sbjct: 2461 ggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaa 2402

                                      
Query: 292  acgggtttctgaagtcgtagttcagc 317
            | || |||||| |||| |||||||||
Sbjct: 2401 atggatttctgtagtcatagttcagc 2376



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>dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I16, full
            insert sequence
          Length = 4284

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 163/206 (79%)
 Strand = Plus / Minus

                                                                        
Query: 112  cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
            |||||||| | || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 3885 cttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaa 3826

                                                                        
Query: 172  gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
            |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 3825 gctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacg 3766

                                                                        
Query: 232  ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
            ||||||| || |||||||| || ||||| || || ||| | || || || |||||||| |
Sbjct: 3765 ggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaa 3706

                                      
Query: 292  acgggtttctgaagtcgtagttcagc 317
            | || |||||| |||| |||||||||
Sbjct: 3705 atggatttctgtagtcatagttcagc 3680



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>dbj|AK058402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-B07, full
            insert sequence
          Length = 1736

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 163/206 (79%)
 Strand = Plus / Minus

                                                                        
Query: 112  cttatctcgattgtgtaggggagcagaggaggcctgaggcgtccgccccgaccaccgaga 171
            |||||||| | || ||||||||||||||||||||||| || || || || ||||| |  |
Sbjct: 1516 cttatctcaactgcgtaggggagcagaggaggcctgaagcatctgcaccaaccacagcaa 1457

                                                                        
Query: 172  gctcgcatatgctgcacagctgaccctcgactgagggcacgaaccgggacgcgcagtagg 231
            |||| |||||| | || ||||| || ||||  || || || ||||||||  | ||||| |
Sbjct: 1456 gctcacatatggtacaaagctgcccttcgatggaaggaacaaaccgggatccacagtacg 1397

                                                                        
Query: 232  ggcaggagacgtccttctgcccgcggtagatcgggacaaaggttgccccgcagacgacga 291
            ||||||| || |||||||| || ||||| || || ||| | || || || |||||||| |
Sbjct: 1396 ggcaggaaacatccttctggccacggtaaattggaacatatgtggcaccacagacgacaa 1337

                                      
Query: 292  acgggtttctgaagtcgtagttcagc 317
            | || |||||| |||| |||||||||
Sbjct: 1336 atggatttctgtagtcatagttcagc 1311



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>gb|AY104039.1| Zea mays PCO096800 mRNA sequence
          Length = 1207

 Score = 46.1 bits (23), Expect = 0.093
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 126 gtaggggagcagaggaggcctgaggcgtccgcccc 160
           |||||||||||||  |||||||||||||| |||||
Sbjct: 880 gtaggggagcagaccaggcctgaggcgtctgcccc 846



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>gb|AC157556.12| Mus musculus chromosome 1, clone RP24-267A19, complete sequence
          Length = 198267

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     gaactggagatacaaacatga 68
              |||||||||||||||||||||
Sbjct: 145020 gaactggagatacaaacatga 145000



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>gb|AC005021.1| Homo sapiens BAC clone GS1-293C5 from 7, complete sequence
          Length = 64607

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaaaatctctggtaggtaga 24
             ||||||||||||||||||||
Sbjct: 61607 aaaaatctctggtaggtaga 61626



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>gb|AC079059.10| Homo sapiens chromosome 18, clone RP11-281L12, complete sequence
          Length = 145993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 128   aggggagcagaggaggcctgaggcgtcc 155
             |||| |||||||||||| ||||||||||
Sbjct: 90006 agggcagcagaggaggcatgaggcgtcc 89979



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>gb|AC021594.9| Homo sapiens, clone RP11-154H12, complete sequence
          Length = 162336

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 128   aggggagcagaggaggcctgaggcgtcc 155
             |||| |||||||||||| ||||||||||
Sbjct: 97972 agggcagcagaggaggcatgaggcgtcc 97945



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>gb|AC109636.3| Homo sapiens BAC clone RP11-19D21 from 4, complete sequence
          Length = 71715

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 4     aaaaaatctctggtaggtag 23
             ||||||||||||||||||||
Sbjct: 42043 aaaaaatctctggtaggtag 42062



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>gb|AY210982.1| Homo sapiens paraoxonase 2 (PON2) gene, complete cds
          Length = 32705

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    aaaaatctctggtaggtaga 24
            ||||||||||||||||||||
Sbjct: 2452 aaaaatctctggtaggtaga 2433



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>ref|XM_308807.2| Anopheles gambiae str. PEST ENSANGP00000021654 (ENSANGG00000019165),
            partial mRNA
          Length = 2516

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  ggcgtccgccccgaccaccg 168
            ||||||||||||||||||||
Sbjct: 1017 ggcgtccgccccgaccaccg 998


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,540,826
Number of Sequences: 3902068
Number of extensions: 2540826
Number of successful extensions: 46164
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46079
Number of HSP's gapped (non-prelim): 84
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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