ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane... 452 e-124
2gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrop... 180 2e-42
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
4dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
5dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
6dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds 92 1e-15
7dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase,... 92 1e-15
8emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in... 44 0.24
9emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 i... 42 0.96
10gb|BC108910.1| Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha... 40 3.8
11gb|BC108911.1| Homo sapiens ST8 alpha-N-acetyl-neuraminide alpha... 40 3.8
12gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, com... 40 3.8
13gb|AC114649.9| Mus musculus chromosome 5, clone RP24-150M14, com... 40 3.8
14gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, comp... 40 3.8
15gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, com... 40 3.8
16gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosom... 40 3.8
17ref|XM_808881.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 3.8
18gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Canc... 40 3.8
19ref|XM_812966.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 3.8
20ref|NM_013305.4| Homo sapiens ST8 alpha-N-acetyl-neuraminide alp... 40 3.8
21gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, c... 40 3.8
22gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, com... 40 3.8
23emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N1... 40 3.8
24gb|AC090311.12| Homo sapiens chromosome 18, clone RP11-742D12, c... 40 3.8
25gb|AC121765.2| Homo sapiens chromosome 3 clone RP11-767D18, comp... 40 3.8
26gb|AC090241.9| Homo sapiens chromosome 18, clone RP11-687F6, com... 40 3.8
27dbj|AK056270.1| Homo sapiens cDNA FLJ31708 fis, clone NT2RI20062... 40 3.8
28gb|AC105266.2| Homo sapiens chromosome 3 clone RP11-796K6, compl... 40 3.8
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
30gb|AC134025.2| Homo sapiens 3 BAC RP11-231I13 (Roswell Park Canc... 40 3.8
31gb|AC004695.1|AC004695 Homo sapiens BAC clone CTA-317H1 from 3p1... 40 3.8
32gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
33emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa... 40 3.8
34dbj|AB044479.1| Volvox rousseletii chloroplast psbC gene for pho... 40 3.8
35dbj|AB044478.1| Volvox globator chloroplast psbC gene for photos... 40 3.8
36dbj|AB044477.1| Volvox barberi chloroplast psbC gene for photosy... 40 3.8

>dbj|D13472.2|BLYINOPP Hordeum vulgare mRNA for vacuolar membrane proton-translocating
            inorganic pyrophosphatase, complete cds
          Length = 2649

 Score =  452 bits (228), Expect = e-124
 Identities = 280/292 (95%), Gaps = 9/292 (3%)
 Strand = Plus / Minus

                                                                        
Query: 5    caatcatcatgatatcattgttcaagggtgggttcaaacattatcgtcgtcatcatggga 64
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 caatcatcatgatatcattgttcaagggtgggttcaaacattatcgtcgtcatcatggga 2590

                                                                        
Query: 65   cgaggaaaatttgccaggcacataccaacgagggaggacatctggtctctctcttctact 124
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 cgaggaaaatttgccagacacataccaacgagggaggacatctggtctctctcttctact 2530

                                                                        
Query: 125  acatggagctacaagccggtaatgtaatggtgagactaacataacgccttcaagaggcca 184
            ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 2529 acatggagctacaagcc-gtaatgtaat-gtgagactaacataacg-cttcaagaggcca 2473

                                                                        
Query: 185  ggggaaaggggggtaggtaaccgcggcaatcctggaatgacattgacaaccaaaaataac 244
            ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 2472 ggggaaaggggggtaggtaactgcggcaatcctgg-atgacattgacaaccaaaaataac 2414

                                                                
Query: 245  agcagcgcacaacgtacgaa-----ggcgggcggtcaggcaggcgggggagt 291
            ||||||||||||||||||||     ||||||||| |||||||||||||||||
Sbjct: 2413 agcagcgcacaacgtacgaacggcgggcgggcgggcaggcaggcgggggagt 2362



to top

>gb|AY296911.1| Triticum aestivum vacuolar proton-inorganic pyrophosphatase mRNA,
            complete cds
          Length = 2671

 Score =  180 bits (91), Expect = 2e-42
 Identities = 215/249 (86%), Gaps = 18/249 (7%)
 Strand = Plus / Minus

                                                                        
Query: 34   gggttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccaggcacatacc--- 90
            |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||   
Sbjct: 2617 gggttcaaacattatcgtcgtcatcacgggacgaggaaaatttgccagacacataccaat 2558

                                                                        
Query: 91   aacgagggaggacatctggtctctctcttctactacatggagctacaagccggtaatgta 150
            || ||  |||||||||||||||||||||||||||||||||||||||||||||     |||
Sbjct: 2557 aatgaccgaggacatctggtctctctcttctactacatggagctacaagccg-----gta 2503

                                                                        
Query: 151  atggtgagactaacataacgccttcaagaggcc-aggggaaag-gggggtaggtaaccgc 208
            |||||||||||||| |||| |   ||||||||| | ||||||| |||||||   ||| ||
Sbjct: 2502 atggtgagactaacgtaacacacccaagaggccaaagggaaagtgggggta---aactgc 2446

                                                                        
Query: 209  ggcaatcctgg---aatgacattgacaaccaaaaataacagcagcgcacaacgtacgaa- 264
            |||||||||||   |||||||   | |||||||||||||||||||||||||| |||||| 
Sbjct: 2445 ggcaatcctggaataatgaca-caagaaccaaaaataacagcagcgcacaacatacgaac 2387

                     
Query: 265  ggcgggcgg 273
            |||||||||
Sbjct: 2386 ggcgggcgg 2378



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                             
Query: 36      gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 81
               ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3935071 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 3935026



to top

>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0035I03
          Length = 153749

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                           
Query: 36    gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 81
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40947 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 40902



to top

>dbj|AK066933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F19, full
            insert sequence
          Length = 2738

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 36   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 81
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 2647



to top

>dbj|AB012766.1| Oryza sativa gene for ovp2, complete cds
          Length = 5985

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 36   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 81
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5951 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 5906



to top

>dbj|D45384.1| Oryza sativa mRNA for vacuolar H+-pyrophosphatase, complete cds
          Length = 2710

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 46/46 (100%)
 Strand = Plus / Minus

                                                          
Query: 36   gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 81
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 gttcaaacattatcgtcgtcatcatgggacgaggaaaatttgccag 2632



to top

>emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in linkage group 21,
             complete sequence
          Length = 153142

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 265   ggcgggcggtcaggcaggcggg 286
             ||||||||||||||||||||||
Sbjct: 66712 ggcgggcggtcaggcaggcggg 66691



to top

>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13,
              complete sequence
          Length = 182888

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 107    tggtctctctcttctactaca 127
              |||||||||||||||||||||
Sbjct: 109831 tggtctctctcttctactaca 109851



to top

>gb|BC108910.1| Homo sapiens ST8 alpha-N-acetyl-neuraminide
           alpha-2,8-sialyltransferase 5, mRNA (cDNA clone
           MGC:119670 IMAGE:40011279), complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 gcggtcaggcaggcggggga 289
           ||||||||||||||||||||
Sbjct: 107 gcggtcaggcaggcggggga 88



to top

>gb|BC108911.1| Homo sapiens ST8 alpha-N-acetyl-neuraminide
           alpha-2,8-sialyltransferase 5, mRNA (cDNA clone
           MGC:119671 IMAGE:40011281), complete cds
          Length = 1953

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 gcggtcaggcaggcggggga 289
           ||||||||||||||||||||
Sbjct: 107 gcggtcaggcaggcggggga 88



to top

>gb|AC160538.8| Mus musculus chromosome 15, clone RP24-156D3, complete sequence
          Length = 158943

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   acattgacaaccaaaaataa 243
             ||||||||||||||||||||
Sbjct: 66522 acattgacaaccaaaaataa 66503



to top

>gb|AC114649.9| Mus musculus chromosome 5, clone RP24-150M14, complete sequence
          Length = 154765

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    tctctctcttctactacatg 129
              ||||||||||||||||||||
Sbjct: 137646 tctctctcttctactacatg 137627



to top

>gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, complete sequence
          Length = 164355

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ttcaagaggccaggggaaag 192
             ||||||||||||||||||||
Sbjct: 84354 ttcaagaggccaggggaaag 84335



to top

>gb|AC105947.11| Mus musculus chromosome 18, clone RP24-66N1, complete sequence
          Length = 207139

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    ctctctcttctactacatgg 130
              ||||||||||||||||||||
Sbjct: 166627 ctctctcttctactacatgg 166608



to top

>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence
          Length = 195911

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ctctctcttctactacatgg 130
              ||||||||||||||||||||
Sbjct: 178571 ctctctcttctactacatgg 178590



to top

>ref|XM_808881.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053506661.50) partial mRNA
          Length = 2991

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   tcatgggacgaggaaaattt 76
            ||||||||||||||||||||
Sbjct: 1392 tcatgggacgaggaaaattt 1411



to top

>gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 154964

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    tctggtctctctcttctact 124
              ||||||||||||||||||||
Sbjct: 108378 tctggtctctctcttctact 108359



to top

>ref|XM_812966.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053511245.110) partial mRNA
          Length = 2988

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   tcatgggacgaggaaaattt 76
            ||||||||||||||||||||
Sbjct: 1392 tcatgggacgaggaaaattt 1411



to top

>ref|NM_013305.4| Homo sapiens ST8 alpha-N-acetyl-neuraminide
           alpha-2,8-sialyltransferase 5 (ST8SIA5), mRNA
          Length = 2627

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 gcggtcaggcaggcggggga 289
           ||||||||||||||||||||
Sbjct: 464 gcggtcaggcaggcggggga 445



to top

>gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, complete sequence
          Length = 184010

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   acattgacaaccaaaaataa 243
             ||||||||||||||||||||
Sbjct: 38446 acattgacaaccaaaaataa 38465



to top

>gb|AC142299.1| Pan troglodytes BAC clone RP43-121O18 from 7, complete sequence
          Length = 146878

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    ttcaagaggccaggggaaag 192
              ||||||||||||||||||||
Sbjct: 105556 ttcaagaggccaggggaaag 105575



to top

>emb|AL035692.10|HS329N18 Human DNA sequence from clone RP3-329N18 on chromosome 6q22.1-22.33,
             complete sequence
          Length = 84764

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tctggtctctctcttctact 124
             ||||||||||||||||||||
Sbjct: 50835 tctggtctctctcttctact 50816



to top

>gb|AC090311.12| Homo sapiens chromosome 18, clone RP11-742D12, complete sequence
          Length = 97882

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 270  gcggtcaggcaggcggggga 289
            ||||||||||||||||||||
Sbjct: 1857 gcggtcaggcaggcggggga 1838



to top

>gb|AC121765.2| Homo sapiens chromosome 3 clone RP11-767D18, complete sequence
          Length = 194455

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   acattgacaaccaaaaataa 243
             ||||||||||||||||||||
Sbjct: 77255 acattgacaaccaaaaataa 77274



to top

>gb|AC090241.9| Homo sapiens chromosome 18, clone RP11-687F6, complete sequence
          Length = 166194

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    gcggtcaggcaggcggggga 289
              ||||||||||||||||||||
Sbjct: 148679 gcggtcaggcaggcggggga 148660



to top

>dbj|AK056270.1| Homo sapiens cDNA FLJ31708 fis, clone NT2RI2006271, highly similar
           to Human alpha2,8-sialyltransferase mRNA
          Length = 2594

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 gcggtcaggcaggcggggga 289
           ||||||||||||||||||||
Sbjct: 557 gcggtcaggcaggcggggga 538



to top

>gb|AC105266.2| Homo sapiens chromosome 3 clone RP11-796K6, complete sequence
          Length = 181462

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   acattgacaaccaaaaataa 243
             ||||||||||||||||||||
Sbjct: 33181 acattgacaaccaaaaataa 33200



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 264     aggcgggcggtcaggcaggcgggg 287
               |||||||||||||||| |||||||
Sbjct: 2719251 aggcgggcggtcaggcgggcgggg 2719228



to top

>gb|AC134025.2| Homo sapiens 3 BAC RP11-231I13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183111

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   acattgacaaccaaaaataa 243
             ||||||||||||||||||||
Sbjct: 80094 acattgacaaccaaaaataa 80075



to top

>gb|AC004695.1|AC004695 Homo sapiens BAC clone CTA-317H1 from 3p13-3p14.2, complete sequence
          Length = 149572

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 262    gaaggcgggcggtcaggcaggcgg 285
              |||||||||||| |||||||||||
Sbjct: 102371 gaaggcgggcgggcaggcaggcgg 102394



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 264     aggcgggcggtcaggcaggcgggg 287
               |||||||||||||||| |||||||
Sbjct: 2719195 aggcgggcggtcaggcgggcgggg 2719172



to top

>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 151878

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   aggcgggcggtcaggcaggcgggg 287
             |||||||||||||||| |||||||
Sbjct: 88177 aggcgggcggtcaggcgggcgggg 88154



to top

>dbj|AB044479.1| Volvox rousseletii chloroplast psbC gene for photosystem II CP43
           apoprotein, strain:UTEX 1862
          Length = 780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 aaccaaaaataacagcagcg 251
           ||||||||||||||||||||
Sbjct: 370 aaccaaaaataacagcagcg 351



to top

>dbj|AB044478.1| Volvox globator chloroplast psbC gene for photosystem II CP43
           apoprotein, strain:UTEX 955
          Length = 780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 aaccaaaaataacagcagcg 251
           ||||||||||||||||||||
Sbjct: 370 aaccaaaaataacagcagcg 351



to top

>dbj|AB044477.1| Volvox barberi chloroplast psbC gene for photosystem II CP43
           apoprotein, strain:UTEX 804
          Length = 780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 aaccaaaaataacagcagcg 251
           ||||||||||||||||||||
Sbjct: 370 aaccaaaaataacagcagcg 351


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,433,578
Number of Sequences: 3902068
Number of extensions: 2433578
Number of successful extensions: 46820
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46719
Number of HSP's gapped (non-prelim): 96
length of query: 291
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 269
effective length of database: 17,147,199,772
effective search space: 4612596738668
effective search space used: 4612596738668
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top