>S27A2_HUMAN (O14975) Very-long-chain acyl-CoA synthetase (EC 6.2.1.-) (VLCS)|
(Very-long-chain-fatty-acid-CoA ligase) (VLACS)
(THCA-CoA ligase) (Fatty-acid-coenzyme A ligase, very
long-chain 1) (Long-chain-fatty-acid--CoA ligase) (EC
6.2.1.3) (Fatty acid
Length = 620
Score = 24.6 bits (52), Expect(2) = 6.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 153 YNLLLAHINRLIRSHHKTKPATFF---FLGYISRTPHAKVYMVQD 278
Y L +A + R +RS+ + +PA FL +TPH + +D
Sbjct: 32 YFLKVAAVGRRVRSYGQRRPARTILRAFLEKARQTPHKPFLLFRD 76
Score = 21.6 bits (44), Expect(2) = 6.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 43 PYYISDIGYCISAA 84
PY+ DIGY + A
Sbjct: 24 PYFFQDIGYFLKVA 37
>YORA_BPP1 (Q06262) Hypothetical 36.0 kDa protein in doc-Gp10 intergenic|
region (ORFA)
Length = 312
Score = 27.3 bits (59), Expect = 9.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 85 QCQHSDSSTSWG*IVQQSGTNKTIIFCWH 171
QCQ +D S IV N ++ CWH
Sbjct: 58 QCQAADRSWCDNHIVHAERDNSAVLLCWH 86
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,586,967
Number of Sequences: 219361
Number of extensions: 1087075
Number of successful extensions: 2595
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2595
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)