ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44d09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chro... 46 0.069
2gb|AC012067.2|AC012067 Homo sapiens BAC clone RP11-192N14 from Y... 46 0.069
3gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complet... 46 0.069
4ref|XM_791991.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.27
5gb|AC090013.16| Homo sapiens 12 BAC RP11-407P2 (Roswell Park Can... 44 0.27
6gb|AF351270.1| Gossypium hirsutum clone JESPR28 microsatellite s... 44 0.27
7gb|AC131664.3| Mus musculus BAC clone RP23-274J16 from chromosom... 44 0.27
8gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, com... 44 0.27
9gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosom... 42 1.1
10gb|AC115816.9| Mus musculus chromosome 6, clone RP23-432K18, com... 42 1.1
11gb|BC028603.1| Homo sapiens serine/threonine kinase 38 like, mRN... 42 1.1
12gb|AC093318.52| Mus musculus strain C57BL/6J clone rp23-252h7 ma... 42 1.1
13emb|CR606717.1| full-length cDNA clone CS0DJ011YL06 of T cells (... 42 1.1
14emb|CR602115.1| full-length cDNA clone CS0DI072YF14 of Placenta ... 42 1.1
15gb|AC092829.4| Homo sapiens 12 BAC RP11-165P7 (Roswell Park Canc... 42 1.1
16gb|AY335703.1| Synthetic construct Homo sapiens serine/threonine... 42 1.1
17gb|AC092453.10| Homo sapiens 12 BAC RP11-130L11 (Roswell Park Ca... 42 1.1
18ref|NM_015000.1| Homo sapiens serine/threonine kinase 38 like (S... 42 1.1
19emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in l... 42 1.1
20gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromos... 42 1.1
21gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, comple... 42 1.1
22dbj|AB023182.2| Homo sapiens mRNA for KIAA0965 protein, partial cds 42 1.1
23gb|BC086963.1| Danio rerio zgc:92134, mRNA (cDNA clone MGC:92134... 40 4.3
24gb|AC136019.3| Mus musculus BAC clone RP24-404D22 from chromosom... 40 4.3
25gb|AC124770.4| Mus musculus BAC clone RP23-8J2 from chromosome 1... 40 4.3
26gb|DQ483695.1| Gymnogyps californianus clone 118F microsatellite... 40 4.3
27emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 ma... 40 4.3
28ref|XM_567662.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 4.3
29ref|XM_568807.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 4.3
30emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 ma... 40 4.3
31gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, comple... 40 4.3
32emb|AL583962.5| Human DNA sequence from clone LA20-VLA2066F10L o... 40 4.3
33emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chr... 40 4.3
34gb|BC045733.1| Homo sapiens KIAA1443, mRNA (cDNA clone IMAGE:482... 40 4.3
35gb|AC013562.6| Homo sapiens chromosome 8, clone RP11-313C15, com... 40 4.3
36gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 4.3
37gb|AC090024.11| Homo sapiens 3q BAC RP11-259J3 (Roswell Park Can... 40 4.3
38gb|AC090643.22| Homo sapiens 12q BAC RP11-489P6 (Roswell Park Ca... 40 4.3
39gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complet... 40 4.3
40gb|AC090735.5| Homo sapiens chromosome 8, clone RP11-1145L24, co... 40 4.3
41gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosom... 40 4.3
42gb|AC016763.8| Homo sapiens BAC clone RP11-548K3 from 2, complet... 40 4.3
43ref|NM_001008574.1| Danio rerio zgc:92134 (zgc:92134), mRNA 40 4.3
44emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, compl... 40 4.3
45emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chro... 40 4.3
46emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chr... 40 4.3 
>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part of
              the PCDH11X gene for protocadherin 11 X-linked, complete
              sequence
          Length = 170805

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 243    ttcatgctaaaaaaggaaaaggg 265
              |||||||||||||||||||||||
Sbjct: 149777 ttcatgctaaaaaaggaaaaggg 149755
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>gb|AC012067.2|AC012067 Homo sapiens BAC clone RP11-192N14 from Y, complete sequence
          Length = 164507

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 243   ttcatgctaaaaaaggaaaaggg 265
             |||||||||||||||||||||||
Sbjct: 95672 ttcatgctaaaaaaggaaaaggg 95650
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>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence
          Length = 170658

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 243   ttcatgctaaaaaaggaaaaggg 265
             |||||||||||||||||||||||
Sbjct: 58223 ttcatgctaaaaaaggaaaaggg 58245
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>ref|XM_791991.1| PREDICTED: Strongylocentrotus purpuratus similar to
           Ecdysone-induced protein 75B isoform C (E75-C)
           (LOC592471), mRNA
          Length = 677

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 208 ctgggccatcatcatcatcttc 229
           ||||||||||||||||||||||
Sbjct: 221 ctgggccatcatcatcatcttc 242
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>gb|AC090013.16| Homo sapiens 12 BAC RP11-407P2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 85446

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 216   tcatcatcatcttcccccttcccctc 241
             ||||||||||||||||||| ||||||
Sbjct: 15600 tcatcatcatcttccccctgcccctc 15575
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>gb|AF351270.1| Gossypium hirsutum clone JESPR28 microsatellite sequence
          Length = 255

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 214 catcatcatcatcttccccctt 235
           ||||||||||||||||||||||
Sbjct: 105 catcatcatcatcttccccctt 126
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>gb|AC131664.3| Mus musculus BAC clone RP23-274J16 from chromosome 5, complete sequence
          Length = 189996

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 130   ttcctctaatccttcttcttcc 151
             ||||||||||||||||||||||
Sbjct: 20676 ttcctctaatccttcttcttcc 20655
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>gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, complete sequence
          Length = 165291

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 130   ttcctctaatccttcttcttcc 151
             ||||||||||||||||||||||
Sbjct: 11514 ttcctctaatccttcttcttcc 11535
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>gb|AC132396.6| Mus musculus BAC clone RP23-394F17 from chromosome 6, complete sequence
          Length = 190146

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 21    agcaagagagagaaagcaaaa 41
             |||||||||||||||||||||
Sbjct: 81715 agcaagagagagaaagcaaaa 81695
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>gb|AC115816.9| Mus musculus chromosome 6, clone RP23-432K18, complete sequence
          Length = 229261

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    agcaagagagagaaagcaaaa 41
             |||||||||||||||||||||
Sbjct: 44142 agcaagagagagaaagcaaaa 44162
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>gb|BC028603.1| Homo sapiens serine/threonine kinase 38 like, mRNA (cDNA clone
           MGC:33176 IMAGE:4823429), complete cds
          Length = 4725

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctaatccttcttcttccatgg 155
           |||||||||||||||||||||
Sbjct: 348 ctaatccttcttcttccatgg 328
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>gb|AC093318.52| Mus musculus strain C57BL/6J clone rp23-252h7 map 1, complete sequence
          Length = 198381

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 21    agcaagagagagaaagcaaaa 41
             |||||||||||||||||||||
Sbjct: 88813 agcaagagagagaaagcaaaa 88833
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>emb|CR606717.1| full-length cDNA clone CS0DJ011YL06 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1687

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctaatccttcttcttccatgg 155
           |||||||||||||||||||||
Sbjct: 225 ctaatccttcttcttccatgg 205
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>emb|CR602115.1| full-length cDNA clone CS0DI072YF14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1722

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctaatccttcttcttccatgg 155
           |||||||||||||||||||||
Sbjct: 243 ctaatccttcttcttccatgg 223
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>gb|AC092829.4| Homo sapiens 12 BAC RP11-165P7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 116783

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 135    ctaatccttcttcttccatgg 155
              |||||||||||||||||||||
Sbjct: 104721 ctaatccttcttcttccatgg 104741
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>gb|AY335703.1| Synthetic construct Homo sapiens serine/threonine kinase 38 like
           (STK38L) mRNA, partial cds
          Length = 1395

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctaatccttcttcttccatgg 155
           |||||||||||||||||||||
Sbjct: 175 ctaatccttcttcttccatgg 155
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>gb|AC092453.10| Homo sapiens 12 BAC RP11-130L11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160984

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 135    ctaatccttcttcttccatgg 155
              |||||||||||||||||||||
Sbjct: 102642 ctaatccttcttcttccatgg 102662
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>ref|NM_015000.1| Homo sapiens serine/threonine kinase 38 like (STK38L), mRNA
          Length = 4725

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctaatccttcttcttccatgg 155
           |||||||||||||||||||||
Sbjct: 348 ctaatccttcttcttccatgg 328
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>emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in linkage group 18, complete
              sequence
          Length = 164748

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 214    catcatcatcatcttcccccttccc 238
              ||||||||||||||||| |||||||
Sbjct: 148474 catcatcatcatcttcctccttccc 148450
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>gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromosome ul, complete
              sequence
          Length = 260878

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 238    cctctttcatgctaaaaaaggaaaa 262
              |||||| ||||||||||||||||||
Sbjct: 257340 cctcttccatgctaaaaaaggaaaa 257364
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>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence
          Length = 198919

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 225   tcttcccccttcccctctttc 245
             |||||||||||||||||||||
Sbjct: 34041 tcttcccccttcccctctttc 34061
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>dbj|AB023182.2| Homo sapiens mRNA for KIAA0965 protein, partial cds
          Length = 5181

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 135 ctaatccttcttcttccatgg 155
           |||||||||||||||||||||
Sbjct: 459 ctaatccttcttcttccatgg 439
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>gb|BC086963.1| Danio rerio zgc:92134, mRNA (cDNA clone MGC:92134 IMAGE:7049137),
            complete cds
          Length = 2331

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccatcatcatcatcttcccc 232
            ||||||||||||||||||||
Sbjct: 1794 ccatcatcatcatcttcccc 1813
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>gb|AC136019.3| Mus musculus BAC clone RP24-404D22 from chromosome 14, complete
             sequence
          Length = 162787

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cttcccccttcccctctttc 245
             ||||||||||||||||||||
Sbjct: 60094 cttcccccttcccctctttc 60075
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>gb|AC124770.4| Mus musculus BAC clone RP23-8J2 from chromosome 18, complete sequence
          Length = 216754

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcttcccccttcccctct 242
              ||||||||||||||||||||
Sbjct: 138300 catcttcccccttcccctct 138281



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcttcccccttcccctct 242
              ||||||||||||||||||||
Sbjct: 138208 catcttcccccttcccctct 138189



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 223    catcttcccccttcccctct 242
              ||||||||||||||||||||
Sbjct: 138185 catcttcccccttcccctct 138166
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>gb|DQ483695.1| Gymnogyps californianus clone 118F microsatellite sequence
          Length = 512

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cttcccccttcccctctttc 245
           ||||||||||||||||||||
Sbjct: 324 cttcccccttcccctctttc 305
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>emb|CT005231.3| Pan troglodytes chromosome X clone PTB-024D11 map Xq28, complete
             sequence
          Length = 179396

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    gcaagagagagaaagcaaaa 41
             ||||||||||||||||||||
Sbjct: 47464 gcaagagagagaaagcaaaa 47445
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>ref|XM_567662.1| Cryptococcus neoformans var. neoformans JEC21 protein-vacuolar
            targeting-related protein (CNK01830) partial mRNA
          Length = 2312

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  catcatcatcttcccccttc 236
            ||||||||||||||||||||
Sbjct: 1568 catcatcatcttcccccttc 1549
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>ref|XM_568807.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNB01350) partial mRNA
          Length = 2577

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  tcttcccccttcccctcttt 244
            ||||||||||||||||||||
Sbjct: 1654 tcttcccccttcccctcttt 1635
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>emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 map Xq28, complete sequence
          Length = 197120

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     gcaagagagagaaagcaaaa 41
              ||||||||||||||||||||
Sbjct: 171724 gcaagagagagaaagcaaaa 171705
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>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence
          Length = 179881

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ttcttcttccatggttgcat 161
             ||||||||||||||||||||
Sbjct: 96589 ttcttcttccatggttgcat 96608
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>emb|AL583962.5| Human DNA sequence from clone LA20-VLA2066F10L on chromosome 20
            Contains part of the BPI gene for
            bactericidal/permeability-increasing protein, complete
            sequence
          Length = 6086

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  ccatcatcatcatcttcccc 232
            ||||||||||||||||||||
Sbjct: 2176 ccatcatcatcatcttcccc 2157
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>emb|AL157700.13| Human DNA sequence from clone RP6-201G10 on chromosome Xq12-13.1 Contains
              the 3' end of the OPHN1 gene for oligophrenin 1, complete
              sequence
          Length = 190611

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     gcaagagagagaaagcaaaa 41
              ||||||||||||||||||||
Sbjct: 166157 gcaagagagagaaagcaaaa 166176
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>gb|BC045733.1| Homo sapiens KIAA1443, mRNA (cDNA clone IMAGE:4822379), containing
            frame-shift errors
          Length = 1766

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 214  catcatcatcatcttcccccttcccctc 241
            ||||||||||||||||| ||| ||||||
Sbjct: 1617 catcatcatcatcttcctcctccccctc 1590
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>gb|AC013562.6| Homo sapiens chromosome 8, clone RP11-313C15, complete sequence
          Length = 188755

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ttctacagcaagagagagaa 34
              ||||||||||||||||||||
Sbjct: 168454 ttctacagcaagagagagaa 168473
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>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete
              sequence
          Length = 1632307

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    tcttcccccttcccctcttt 244
              ||||||||||||||||||||
Sbjct: 404912 tcttcccccttcccctcttt 404931
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>gb|AC090024.11| Homo sapiens 3q BAC RP11-259J3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 104389

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 18    tacagcaagagagagaaagcaaaa 41
             ||||||||||||||||||| ||||
Sbjct: 19268 tacagcaagagagagaaagaaaaa 19245
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>gb|AC090643.22| Homo sapiens 12q BAC RP11-489P6 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 52154

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   atcatcttcccccttcccct 240
             ||||||||||||||||||||
Sbjct: 34223 atcatcttcccccttcccct 34204
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>gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complete sequence
          Length = 158271

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tttttcctctaatccttctt 146
              ||||||||||||||||||||
Sbjct: 127930 tttttcctctaatccttctt 127911
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>gb|AC090735.5| Homo sapiens chromosome 8, clone RP11-1145L24, complete sequence
          Length = 149089

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    ttctacagcaagagagagaa 34
             ||||||||||||||||||||
Sbjct: 93243 ttctacagcaagagagagaa 93224
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>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence
          Length = 195151

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   ttcttcttccatggttgcat 161
             ||||||||||||||||||||
Sbjct: 28724 ttcttcttccatggttgcat 28743
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>gb|AC016763.8| Homo sapiens BAC clone RP11-548K3 from 2, complete sequence
          Length = 143283

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cttcccccttcccctctttc 245
             ||||||||||||||||||||
Sbjct: 27346 cttcccccttcccctctttc 27327
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>ref|NM_001008574.1| Danio rerio zgc:92134 (zgc:92134), mRNA
          Length = 2331

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  ccatcatcatcatcttcccc 232
            ||||||||||||||||||||
Sbjct: 1794 ccatcatcatcatcttcccc 1813
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>emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, complete sequence
          Length = 269619

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 213   ccatcatcatcatcttcccccttc 236
             ||||||||||||||||||| ||||
Sbjct: 20850 ccatcatcatcatcttccctcttc 20827
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>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete
              sequence
          Length = 232070

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    tcatcttcccccttcccctc 241
              ||||||||||||||||||||
Sbjct: 142977 tcatcttcccccttcccctc 142996
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>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete
             sequence
          Length = 150285

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   cttcttccatggttgcatggctgc 167
             |||||||||||||||| |||||||
Sbjct: 87880 cttcttccatggttgcctggctgc 87857


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,796,151
Number of Sequences: 3902068
Number of extensions: 4796151
Number of successful extensions: 133091
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132968
Number of HSP's gapped (non-prelim): 123
length of query: 323
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 301
effective length of database: 17,147,199,772
effective search space: 5161307131372
effective search space used: 5161307131372
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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