Clone Name | rbastl44c04 |
---|---|
Clone Library Name | barley_pub |
>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC| 2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related kinase, arginine/serine-rich) (CrkRS) Length = 1490 Score = 30.8 bits (68), Expect = 1.9 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 1/126 (0%) Frame = +1 Query: 19 SNLEPTFRSTHPTHSTYSNTTEYRKQTHNATQTQPQPGHRVRRPGDTTFVLPQVSFSLFL 198 S + + ST P ST+S T+ Q ++ QP V+ T +P + S Sbjct: 574 SQVPASSTSTLPP-STHSKTSAVSSQANS----QPPVQVSVKTQVSVTAAIPHLKTSTLP 628 Query: 199 PIPMIP-L*GGVFRAKQTETGMMIVRRQQEKKEELGEPNYLTRFPAPAFGDRSFMNPHVS 375 P+P+ P L GG ET + + +K++E + LT P P ++P Sbjct: 629 PLPLPPLLPGGDDMDSPKET---LPSKPVKKEKEQRTRHLLTDLPLPPELPGGDLSP--- 682 Query: 376 PDSPGP 393 PDSP P Sbjct: 683 PDSPEP 688
>SCNAA_XENLA (P51167) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 632 Score = 29.6 bits (65), Expect = 4.2 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +1 Query: 259 MMIVRRQQEKKEELGEPNYLTRFPAPAFGDRSFMNPHV 372 M+++ R KK GE + PAPAF D PH+ Sbjct: 540 MILLHRYYYKKANEGEETTVVPTPAPAFADLEQQVPHI 577
>TERM_ADECR (Q96682) DNA terminal protein (Bellett protein) (pTP protein)| Length = 723 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 181 SFSLFLPIPMIPL*GGVFRAKQTETGMMIVRRQQEKKEELGEPNYLTRFP 330 + SL P P PL GG F + E G + + ++ E+ E ++ R P Sbjct: 407 ALSLPGPAPCTPLSGGAFELRPRENGRAVTEEMRRRRGEMIE-RFIDRLP 455
>TERM_ADECC (Q65947) DNA terminal protein (Bellett protein) (pTP protein)| Length = 608 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +1 Query: 181 SFSLFLPIPMIPL*GGVFRAKQTETGMMIVRRQQEKKEELGEPNYLTRFP 330 + SL P P PL GG F + E G + + ++ E+ E ++ R P Sbjct: 292 ALSLPGPAPCTPLSGGAFELRPRENGRAVTEEMRRRRGEMIE-RFIDRLP 340
>GP152_MOUSE (Q8BXS7) Probable G-protein coupled receptor 152| Length = 511 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +1 Query: 280 QEKKEELGEPNYLTRFPAPAFGDRSFMNPHVSPDSPGP 393 Q + + + +P T P PAFGD S NP +S GP Sbjct: 438 QPQLDPVAQPQSNTETPIPAFGDESASNPG-EENSSGP 474
>DHH1_CANGA (Q6FQU5) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 507 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +1 Query: 88 RKQTHNATQTQPQPGHRVRRPGDTTFVLPQVSFSLFLPIP 207 ++Q Q Q Q G + PG F+ PQ F+P+P Sbjct: 429 QEQQQQQQQQQGQQGQQQGYPGQQAFIPPQQGQPQFMPVP 468
>TNR1A_MOUSE (P25118) Tumor necrosis factor receptor superfamily member 1A| precursor (p60) (TNF-R1) (TNF-RI) (TNFR-I) (p55) Length = 454 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = +1 Query: 286 KKEELGEPNYLTRFPAPAFGDRSFMNPHVSPDSPG 390 K+E+ G+P LT P+PAF S NP + +PG Sbjct: 256 KEEKAGKP--LTPAPSPAFSPTSGFNPTLGFSTPG 288
>SGS3_DROYA (P13728) Salivary glue protein Sgs-3 precursor| Length = 263 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +1 Query: 31 PTFRSTHPTHSTYSNTTEYRKQTHNATQTQP-QPGHRVRRPGDTT 162 PT RST H+T + TT R T T +P RRP TT Sbjct: 109 PTTRSTTTRHTTTTTTTTRRPTTTTTTTRRPTTTTTTTRRPTTTT 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,460,190 Number of Sequences: 219361 Number of extensions: 1171355 Number of successful extensions: 2983 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2916 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2982 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)