>gb|AF174433.1| Triticum aestivum heat shock protein 101 (HSP101c) mRNA, complete cds
          Length = 3058

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 131  gatcaatcgacgcggtttctacctacttttcctccatgtcatccacgtttccgccgtcct 190
            |||||||||| |||||||| | ||||| |||||||||||| ||||| | ||||| |||||
Sbjct: 2857 gatcaatcgatgcggtttccatctactcttcctccatgtcgtccacctctccgctgtcct 2798

                
Query: 191  gcat 194
            ||||
Sbjct: 2797 gcat 2794



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 31   ccccaattcaacagatacgattctgaacactctaaatcagcagtttccaaaaacgaaaac 90
            ||||||||||||||||||||||| ||||   |||||||||||   ||||||| | |||||
Sbjct: 2968 ccccaattcaacagatacgattccgaactacctaaatcagcacggtccaaaagcaaaaac 2909

                   
Query: 91   acagctc 97
            | |||||
Sbjct: 2908 agagctc 2902

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 90      cacagctcgcctgctgcagcg 110
               |||||||||||||||||||||
Sbjct: 3244514 cacagctcgcctgctgcagcg 3244534

>gb|AC101391.15| Mus musculus chromosome 5, clone RP23-119E13, complete sequence
          Length = 209590

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    tctaaatcagcagtttccaa 80
             ||||||||||||||||||||
Sbjct: 40951 tctaaatcagcagtttccaa 40970

>gb|AC128699.4| Mus musculus BAC clone RP24-128L21 from chromosome 7, complete sequence
          Length = 152204

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   cttttcctccatgtcatcca 175
             ||||||||||||||||||||
Sbjct: 74444 cttttcctccatgtcatcca 74463

>gb|AC160403.5| Mus musculus 10 BAC RP24-286J14 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 180869

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   cacagctcgcctgctgcagc 109
            ||||||||||||||||||||
Sbjct: 8999 cacagctcgcctgctgcagc 9018

>gb|AC153422.5| Mus musculus 10 BAC RP23-427I15 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 197906

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    cacagctcgcctgctgcagc 109
             ||||||||||||||||||||
Sbjct: 29137 cacagctcgcctgctgcagc 29118

>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 262323

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    acactctaaatcagcagtt 75
             |||||||||||||||||||
Sbjct: 31685 acactctaaatcagcagtt 31703

>ref|XM_590227.2| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 1 (LOC539901), mRNA
          Length = 4836

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3734 ctgcagcgaacttggagcc 3716

>ref|XM_881424.1| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 8 (LOC539901), mRNA
          Length = 4776

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3674 ctgcagcgaacttggagcc 3656

>ref|XM_881410.1| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 7 (LOC539901), mRNA
          Length = 4770

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3668 ctgcagcgaacttggagcc 3650

>ref|XM_881396.1| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 6 (LOC539901), mRNA
          Length = 4773

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3671 ctgcagcgaacttggagcc 3653

>ref|XM_881382.1| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 5 (LOC539901), mRNA
          Length = 4716

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3614 ctgcagcgaacttggagcc 3596

>ref|XM_881363.1| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 4 (LOC539901), mRNA
          Length = 4536

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3434 ctgcagcgaacttggagcc 3416

>ref|XM_881343.1| PREDICTED: Bos taurus similar to ring finger protein 40 isoform 2,
            transcript variant 3 (LOC539901), mRNA
          Length = 4458

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 103  ctgcagcgaacttggagcc 121
            |||||||||||||||||||
Sbjct: 3356 ctgcagcgaacttggagcc 3338

>gb|AC150556.1| Drosophila melanogaster clone BACR07H20, complete sequence
          Length = 183020

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 146   tttctacctacttttcctc 164
             |||||||||||||||||||
Sbjct: 51730 tttctacctacttttcctc 51748

>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence
          Length = 190937

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 85     gaaaacacagctcgcctgctgca 107
              |||||||||||| ||||||||||
Sbjct: 140383 gaaaacacagcttgcctgctgca 140361

>ref|XM_533874.2| PREDICTED: Canis familiaris similar to Gamma-interferon inducible
           lysosomal thiol reductase precursor
           (Gamma-interferon-inducible protein IP-30) (LOC476669),
           mRNA
          Length = 908

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 157 ttttcctccatgtcatcca 175
           |||||||||||||||||||
Sbjct: 392 ttttcctccatgtcatcca 374

>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence
          Length = 162693

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 85     gaaaacacagctcgcctgctgca 107
              |||||||||||| ||||||||||
Sbjct: 118038 gaaaacacagcttgcctgctgca 118016

>gb|AF101312.2| Caenorhabditis elegans cosmid F56E10, complete sequence
          Length = 41184

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 74    tttccaaaaacgaaaacac 92
             |||||||||||||||||||
Sbjct: 11248 tttccaaaaacgaaaacac 11266

>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete
             sequence
          Length = 176004

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    aaatcagcagtttccaaaa 82
             |||||||||||||||||||
Sbjct: 35374 aaatcagcagtttccaaaa 35392

>emb|AL121920.21|HSJ539E24 Human DNA sequence from clone RP4-539E24 on chromosome 20 Contains the
             TFAP2C gene for transcription factor AP-2 gamma
             (activating enhancer-binding protein 2 gamma), the PTMAP6
             gene for prothymosin alpha pseudogene 6 and a CpG island,
             complete sequence
          Length = 86363

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 156   cttttcctccatgtcatcc 174
             |||||||||||||||||||
Sbjct: 67690 cttttcctccatgtcatcc 67672

>gb|AC127071.3| Homo sapiens 12 BAC RP11-200K12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 63578

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 59    actctaaatcagcagtttccaaa 81
             |||||||||||||| ||||||||
Sbjct: 19845 actctaaatcagcaatttccaaa 19823

>gb|AC113985.11| Mus musculus chromosome 6, clone RP24-103E20, complete sequence
          Length = 169187

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    aaaaacgaaaacacagctc 97
             |||||||||||||||||||
Sbjct: 57868 aaaaacgaaaacacagctc 57886

>gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome 14, complete sequence
          Length = 204011

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    acagctcgcctgctgcagc 109
             |||||||||||||||||||
Sbjct: 82153 acagctcgcctgctgcagc 82135

>gb|AC013247.8| Drosophila melanogaster, chromosome 2R, region 41D-41E, BAC clone
              BACR06P07, complete sequence
          Length = 187793

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 146    tttctacctacttttcctc 164
              |||||||||||||||||||
Sbjct: 115782 tttctacctacttttcctc 115764

>dbj|AK033508.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030414G15 product:hypothetical protein,
           full insert sequence
          Length = 2347

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 79  aaaaacgaaaacacagctc 97
           |||||||||||||||||||
Sbjct: 376 aaaaacgaaaacacagctc 394

>dbj|AB022053.2| Mus musculus gene for prolyl oligopeptidase, complete cds
          Length = 42600

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 45    atacgattctgaacactctaaat 67
             ||||| |||||||||||||||||
Sbjct: 25625 atacgtttctgaacactctaaat 25647

>gb|AC017082.4| Homo sapiens BAC clone RP11-472M4 from 2, complete sequence
          Length = 183783

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 110    gaacttggagccacagaag 128
              |||||||||||||||||||
Sbjct: 147769 gaacttggagccacagaag 147787

>gb|AC009407.8| Homo sapiens BAC clone RP11-223I10 from 2, complete sequence
          Length = 202568

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 146    tttctacctacttttcctc 164
              |||||||||||||||||||
Sbjct: 120275 tttctacctacttttcctc 120293

>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 45     atacgattctgaacactctaaat 67
              ||||| |||||||||||||||||
Sbjct: 131809 atacgtttctgaacactctaaat 131787

>gb|AE003787.5| Drosophila melanogaster chromosome 2R, section 2 of 73 of the complete
              sequence
          Length = 294609

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 146    tttctacctacttttcctc 164
              |||||||||||||||||||
Sbjct: 105177 tttctacctacttttcctc 105195

>gb|AC015583.34| Mus musculus chromosome 6, clone RP23-329P9, complete sequence
          Length = 201379

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    aaaaacgaaaacacagctc 97
             |||||||||||||||||||
Sbjct: 50213 aaaaacgaaaacacagctc 50195

>dbj|AP001023.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-817I5, complete
            sequence
          Length = 199197

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 64   aaatcagcagtttccaaaa 82
            |||||||||||||||||||
Sbjct: 1271 aaatcagcagtttccaaaa 1289

>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 23     ttcagtcaccccaattcaa 41
              |||||||||||||||||||
Sbjct: 434525 ttcagtcaccccaattcaa 434507

>dbj|AP000673.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-88B16, complete
             sequence
          Length = 143353

 Score = 38.2 bits (19), Expect = 9.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 64    aaatcagcagtttccaaaa 82
             |||||||||||||||||||
Sbjct: 33721 aaatcagcagtttccaaaa 33739


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,444,382
Number of Sequences: 3902068
Number of extensions: 1444382
Number of successful extensions: 101881
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101775
Number of HSP's gapped (non-prelim): 106
length of query: 194
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 172
effective length of database: 17,147,199,772
effective search space: 2949318360784
effective search space used: 2949318360784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)