Clone Name | rbastl44c02 |
---|---|
Clone Library Name | barley_pub |
>BFR2_YARLI (Q6C9G2) Protein BFR2| Length = 495 Score = 32.7 bits (73), Expect = 0.53 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = -1 Query: 455 DDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRD 339 +D+ DG+ + DEQ +SD E SE+EN ++++ ++ Sbjct: 123 EDQDEDGDEDMEDEQDEDESDEELSENENDSSARATLKE 161
>UBF1A_XENLA (P25979) Nucleolar transcription factor 1-A (Upstream binding| factor 1-A) (UBF-1-A) (xUBF-1) Length = 677 Score = 32.3 bits (72), Expect = 0.69 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSS 324 SD++S DGE + DE+ +D D E +D+N + S + + SS Sbjct: 629 SDEDSEDGEENE-DEEGEEDEDEEEDDDDNESGSSSSSSSSADSS 672
>RFCL_HALMA (Q5V1F7) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 508 Score = 32.0 bits (71), Expect = 0.90 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = -1 Query: 470 PPTLSDDESSDGE-THVVDEQAGKD--SDAEFSEDENHTASQQARRDPSRSSLVDII 309 P T + +ES D + T D+ A D SD ++DE TAS+ A D +S L D + Sbjct: 452 PDTDAGEESGDQQVTLAADDGAESDATSDGTTTDDETETASEAAEDDDQQSGLSDFM 508
>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1| Length = 1561 Score = 32.0 bits (71), Expect = 0.90 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRS--SLVDIIASWETGGS 285 S D+SSDGE H V S S D T++ + PS+S + + + +G Sbjct: 459 SSDDSSDGEDHAV--MLTHHSHNSSSTDNTETSTSGSASSPSKSLKTSSSLSPAKRSGSE 516 Query: 284 PPRNFKAECSRTNKHYRLCYRPSAKQQQ 201 P+N KA R + R PS++ Q Sbjct: 517 SPKNAKA---RVHIQSRTSTTPSSRINQ 541
>CLFA_STAAN (Q99VJ4) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 989 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/73 (24%), Positives = 29/73 (39%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPP 279 SD +S D +G DSD+ D + T+ + D S D + PP Sbjct: 871 SDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPP 930 Query: 278 RNFKAECSRTNKH 240 + K + +NK+ Sbjct: 931 NSPKNGTNASNKN 943
>CLFA_STAAM (Q932C5) Clumping factor A precursor (Fibrinogen-binding protein A)| (Fibrinogen receptor A) Length = 935 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/73 (24%), Positives = 29/73 (39%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPP 279 SD +S D +G DSD+ D + T+ + D S D + PP Sbjct: 817 SDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPP 876 Query: 278 RNFKAECSRTNKH 240 + K + +NK+ Sbjct: 877 NSPKNGTNASNKN 889
>DAXX_CERAE (O18805) Death domain-associated protein 6 (Daxx)| Length = 736 Score = 30.4 bits (67), Expect = 2.6 Identities = 21/88 (23%), Positives = 40/88 (45%) Frame = -1 Query: 455 DDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPPR 276 DDE SD E +E+ +++ +F E+E+ Q+ + D + A + GSP Sbjct: 439 DDEESDEEEEEEEEEEEEEA-TDFEEEEDLEQMQEGQEDDEEEEEEEEAAGKDGDGSPMS 497 Query: 275 NFKAECSRTNKHYRLCYRPSAKQQQQHS 192 + + + + + R S +QQ + S Sbjct: 498 SPQISTEKNLEPGKQISRSSGEQQNKVS 525
>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family| member B (PHAPI2 protein) (Silver-stainable protein SSP29) (Acidic protein rich in leucines) Length = 251 Score = 30.4 bits (67), Expect = 2.6 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -1 Query: 455 DDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQ 351 D++ DGE DE+ +D D E ED++ + ++ Sbjct: 179 DEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEE 213
>YAN2_SCHPO (Q10068) Hypothetical protein C3H1.02c in chromosome I| Length = 1036 Score = 30.4 bits (67), Expect = 2.6 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 3/118 (2%) Frame = -1 Query: 467 PTLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQ-QARRDPSRSSLVDIIASW--E 297 P LSD+ H+ G++S +SE +N +S+ D R+S + + + E Sbjct: 126 PILSDEAFCTEVYHI--NGMGEESGVVYSEMQNTQSSETDVMFDCMRTSQYPVTSGYYYE 183 Query: 296 TGGSPPRNFKAECSRTNKHYRLCYRPSAKQQQQHS*CQVSTGALQV*NKMLSQLSFII 123 TGG P K + ++++ Y PS + C + TG + +++LS S I+ Sbjct: 184 TGGHPSELRKLSIEKIREYHKEMYVPS-------NICLIVTGCINE-SRLLSCASGIV 233
>NOG2_SCHPO (O14236) Nucleolar GTP-binding protein 2| Length = 537 Score = 30.0 bits (66), Expect = 3.4 Identities = 14/45 (31%), Positives = 22/45 (48%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSS 324 S+DE + + + G D D E +E+E H S + D S S+ Sbjct: 469 SNDEINSSQKVATQQTEGSDQDGEEAEEEWHGISDDGKADESEST 513
>GPR33_MOUSE (O88416) Probable G-protein coupled receptor 33| Length = 339 Score = 30.0 bits (66), Expect = 3.4 Identities = 16/58 (27%), Positives = 27/58 (46%) Frame = -3 Query: 240 LSSVLSSFCQAAAATLVMSSQHWCFASIK*NAVTVELHYFVFSHLFFIAIINKNTFLL 67 LS +S+ AT + HW F S+ A L +F+ +FF++ I+ + L Sbjct: 72 LSYFISTLILPFMATSFLQDNHWVFGSVLCKAFNSTLSVSMFASVFFLSAISVARYYL 129
>SH2P1_MOUSE (Q62018) SH2 domain-binding protein 1 (Tetratricopeptide| repeat-containing, SH2-binding phosphoprotein of 150 kDa) (TPR-containing, SH2-binding phosphoprotein of 150 kDa) (p150TSP) Length = 1173 Score = 30.0 bits (66), Expect = 3.4 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDE--NHTASQQARRDPSRSSLVDIIASWETGGS 285 SDD S + + + DE ++S+++ +DE N AS ++ D +++ S GS Sbjct: 1017 SDDSSDEDKLKIADEGHPRNSNSDSDDDERPNRRASSESDSDDNQNK------SGSEAGS 1070 Query: 284 PPRNFKAE 261 P R+ + E Sbjct: 1071 PRRSGRQE 1078
>NPM2_HUMAN (Q86SE8) Nucleoplasmin-2| Length = 214 Score = 29.6 bits (65), Expect = 4.4 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = -1 Query: 464 TLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLV 318 T ++E +GE +E+ +D DA+ S +E Q R P + + V Sbjct: 127 TWEEEEEEEGEEEEEEEEDDEDEDADISLEEQSPVKQVKRLVPQKQASV 175
>NPBW2_HUMAN (P48146) Neuropeptides B/W receptor type 2 (G-protein coupled| receptor 8) Length = 333 Score = 29.6 bits (65), Expect = 4.4 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = -3 Query: 180 QHWCFASIK*NAVTVELHYFVFSHLFFIAIINKNTFLL 67 Q+W F + V HY +FS ++F+A+++ + +L+ Sbjct: 108 QYWPFGELLCKLVLAVDHYNIFSSIYFLAVMSVDRYLV 145
>ZN330_MOUSE (Q922H9) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 316 Score = 29.3 bits (64), Expect = 5.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -1 Query: 485 SVRYHPPTLSDDESSDGETHVVDEQAGKDSDAEFSE 378 S +Y DD+ + E +E+ GKDSDAE S+ Sbjct: 258 SDKYGDTGYHDDDEEEDEAEDEEEEDGKDSDAESSD 293
>NOP2_YEAST (P40991) Nucleolar protein NOP2| Length = 618 Score = 29.3 bits (64), Expect = 5.8 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -1 Query: 464 TLSDDESSDGETHVVDEQAGKDSDAE----FSEDENHTASQQARRDPSRSSLVDIIA 306 +L DDE D E +VDE+ + D E + EDE++ A D + L ++ A Sbjct: 87 SLFDDEEDDDEAGLVDEELKDEFDLEQEYDYDEDEDNDAHPIFSDDDDEADLEELNA 143
>GPR33_RATRT (Q49SP8) Probable G-protein coupled receptor 33| Length = 339 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/58 (25%), Positives = 27/58 (46%) Frame = -3 Query: 240 LSSVLSSFCQAAAATLVMSSQHWCFASIK*NAVTVELHYFVFSHLFFIAIINKNTFLL 67 LS +S+ AT + HW F S+ L +F+ +FF++ I+ + + L Sbjct: 72 LSYFISTLILPFMATSFLQDNHWAFGSVLCKVFNSTLSVSMFASVFFLSAISVDRYHL 129
>CHD2_HUMAN (O14647) Chromodomain-helicase-DNA-binding protein 2 (EC 3.6.1.-)| (ATP-dependent helicase CHD2) (CHD-2) Length = 1739 Score = 29.3 bits (64), Expect = 5.8 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 24/111 (21%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQ------------------------ 351 S ESS+ ++ E AG S E + AS++ Sbjct: 55 SSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNR 114 Query: 350 ARRDPSRSSLVDIIASWETGGSPPRNFKAECSRTNKHYRLCYRPSAKQQQQ 198 +R++PSR ++ + +S GSP R + + + K + PS +Q+Q Sbjct: 115 SRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQ---EPSEDEQEQ 162
>PESC_BRARE (P79741) Pescadillo| Length = 582 Score = 29.3 bits (64), Expect = 5.8 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Frame = -1 Query: 479 RYHPPTLSDDESSDGETHVVDEQAGKD----SDAEFSEDENHTASQQARRDPSRSSLVDI 312 R P +DE +GE DE+ +D D E +E+E + A + +R +S V + Sbjct: 448 RGEKPQAEEDEEEEGEEEEDDEEDEEDDEQSEDEEEAEEEANLAEMEEKRSQGKSLSVKV 507
>ZN265_HUMAN (O95218) Zinc finger protein 265 (Zinc finger, splicing)| Length = 337 Score = 28.9 bits (63), Expect = 7.6 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 13/125 (10%) Frame = -1 Query: 455 DDESSDGETHVVDEQAGKDS--------DAEFSEDENHTASQQARRDPSRSSLVDIIASW 300 +DE D + +DE +D DA ED N S + R SRSS +S Sbjct: 158 EDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSS-HSRSSSR 216 Query: 299 ETGGSPPRNFKAECSRTNKHYRLCYRPSAKQQQQHS*CQV-----STGALQV*NKMLSQL 135 + S R+ SR++ + R S++++ + + STGAL K L Q+ Sbjct: 217 SSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSTGALLPHEKDLIQV 276 Query: 134 SFIIL 120 ++L Sbjct: 277 HHLLL 281
>IWS1_RAT (Q3SWT4) IWS1-like protein| Length = 764 Score = 28.9 bits (63), Expect = 7.6 Identities = 20/87 (22%), Positives = 38/87 (43%) Frame = -1 Query: 452 DESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPPRN 273 D SDGE V ++ +G D+ + EN T+ ++ L I ++ P N Sbjct: 24 DSGSDGEDDVNEQHSGSDTGSVDRHSENETSDRE-------DGLTKIHNGTDSENDEPSN 76 Query: 272 FKAECSRTNKHYRLCYRPSAKQQQQHS 192 A S + + +R + S + ++H+ Sbjct: 77 VHASDSESEELHR--PKDSDSESEEHA 101
>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 340 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Frame = -1 Query: 455 DDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPP- 279 DD ++ E +E DSD ++S DEN A R + ++L + +PP Sbjct: 175 DDPKAEEEAKGREENFSMDSDLDYSSDENGPAPAAPREEDCGTALEE---------NPPS 225 Query: 278 -RNFKAECSRTNKHYR 234 N A + T K+ R Sbjct: 226 AANAAANAAATGKNRR 241
>BAZ2B_CHICK (Q9DE13) Bromodomain adjacent to zinc finger domain 2B| (Extracellular matrix protein F22) Length = 2130 Score = 28.9 bits (63), Expect = 7.6 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 1/112 (0%) Frame = -1 Query: 446 SSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDI-IASWETGGSPPRNF 270 SSD + DE+ +D AE SED+ + +A + L+ + +T G Sbjct: 205 SSDSDDLEEDEEEEEDQSAEESEDDESDSENEAHHENKNKVLMHSGVKDMKTDGQKAHE- 263 Query: 269 KAECSRTNKHYRLCYRPSAKQQQQHS*CQVSTGALQV*NKMLSQLSFIILCS 114 K++ RT++ P Q HS Q QV + QL FI S Sbjct: 264 KSQEKRTHQQI-----PLVSDSQTHSSFQSQQKQPQV---LSQQLPFIFQSS 307
>RIN2_MOUSE (Q9D684) Ras and Rab interactor 2 (Ras interaction/interference| protein 2) Length = 903 Score = 28.9 bits (63), Expect = 7.6 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Frame = -1 Query: 392 AEFSEDENHTASQQARRDPSRSSL--------VDIIASWETGGSPPRNFKAECSR 252 A F E E+ + ARR PSRSS +++ + GG+PPR+ +C+R Sbjct: 365 ASFLEAESSAKTLTARR-PSRSSEPEPELELELEMGTAGHAGGAPPRDAPGDCTR 418
>NOP12_NEUCR (Q7S2L7) Nucleolar protein 12| Length = 594 Score = 28.9 bits (63), Expect = 7.6 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = -1 Query: 479 RYHPPTLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSL 321 +Y DDE G+ DEQ+G+ D +E ++ S+ A P SL Sbjct: 134 KYLSKLAEDDEEPAGKRLKADEQSGEKKDTAKAEKKDDDDSESADEVPVHESL 186
>HTF4_PAPHA (Q28772) Transcription factor 12 (Transcription factor HTF-4)| (E-box-binding protein) (DNA-binding protein HTF4) (Fragment) Length = 160 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -1 Query: 473 HPPTLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSR 330 H P SDD SD E+ D + +EDE+ Q+ R+ R Sbjct: 9 HEPPSSDDMKSDDESSQKDIKVSSRGRTSTNEDEDLNPEQKIEREKER 56
>DEC13_DROME (P18171) Defective chorion-1 protein, FC177 isoform precursor| Length = 1590 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = -1 Query: 467 PTLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRS 327 P+ +D+ E + +EQA + + E EDE+ T+ PS S Sbjct: 1273 PSKQEDKPKVEEKVIAEEQAPVEQEEELEEDEDSTSISTTTETPSPS 1319
>RNF34_RAT (Q6AYH3) RING finger protein 34 (RING finger protein MOMO)| Length = 381 Score = 28.9 bits (63), Expect = 7.6 Identities = 21/77 (27%), Positives = 33/77 (42%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPP 279 +DDE DGE D+ D D + E+ + + +R+SL D+ + E G Sbjct: 221 TDDE--DGEEDDDDDDDDDDEDDDEQEENLEEQNPGLSKKKARASLSDLSSLEEVEGMSV 278 Query: 278 RNFKAECSRTNKHYRLC 228 R K +R +Y C Sbjct: 279 RQLKEILARNFVNYSGC 295
>BFR2_ASPFU (Q4WMI1) Protein bfr2| Length = 565 Score = 28.9 bits (63), Expect = 7.6 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 3/63 (4%) Frame = -1 Query: 467 PTLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQAR---RDPSRSSLVDIIASWE 297 P SD+E + D + G D D + SE+ Q++R +D R ++S E Sbjct: 91 PRSSDEEEDSEDEEEEDSELGSDEDEDASEESEEERPQRSRTSAKDSKRQRKESQVSSDE 150 Query: 296 TGG 288 G Sbjct: 151 KDG 153
>IWS1_MOUSE (Q8C1D8) IWS1-like protein| Length = 766 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/73 (24%), Positives = 31/73 (42%) Frame = -1 Query: 452 DESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETGGSPPRN 273 D SDGE V ++ +G D+ + EN T+ ++ L I ++ P N Sbjct: 24 DSGSDGEDGVTEQHSGSDTGSVDHHSENETSDRE-------DGLAKIHNGTDSENDEPSN 76 Query: 272 FKAECSRTNKHYR 234 A S + + +R Sbjct: 77 ANASDSESEELHR 89
>AP3B1_CANFA (Q7YRF1) AP-3 complex subunit beta-1 (Adapter-related protein| complex 3 beta-1 subunit) (Beta3A-adaptin) (Adaptor protein complex AP-3 beta-1 subunit) (Clathrin assembly protein complex 3 beta-1 large chain) Length = 1091 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLV 318 S D SSD E+ +D + + SED + +S + R D S V Sbjct: 686 SSDSSSDSESESGSASGEQDEEGDSSEDSSEDSSSEHRSDSESVSEV 732
>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)| (Zona occludens 1 protein) (Tight junction protein 1) Length = 1745 Score = 28.5 bits (62), Expect = 9.9 Identities = 22/86 (25%), Positives = 39/86 (45%) Frame = -1 Query: 470 PPTLSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLVDIIASWETG 291 P +SD+E + V D +AG+ + A +++ + A R+ S S D + + Sbjct: 121 PEPVSDNEDDSYDEEVHDPRAGRGALANRRSEKSWARDRSASRERSLSPRSDRRSVASSQ 180 Query: 290 GSPPRNFKAECSRTNKHYRLCYRPSA 213 + P SR N+ Y L RP++ Sbjct: 181 PAKPTKVTLVKSRKNEEYGL--RPAS 204
>TOP1_SCHPO (P07799) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| Length = 814 Score = 28.5 bits (62), Expect = 9.9 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%) Frame = -1 Query: 458 SDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQA--RRDPSRSS 324 SD+ES E H + E K S +E ED+ ++A +++ S SS Sbjct: 30 SDEESDSSENHPLSESLNKKSKSESDEDDIPIRKRRASSKKNMSNSS 76
>ENPL_ARATH (Q9STX5) Endoplasmin homolog precursor (GRP94 homolog) (Protein| SHEPHERD) (HSP90-like protein 7) Length = 823 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = -1 Query: 461 LSDDESSDGETHVVDEQAGKDSDAEFSEDENHTASQQARRDPSRSSLV-DIIASW 300 + +DES+D ET + K+ DAE + E +++ + L+ D+ A W Sbjct: 294 VEEDESADEETETTSTEEEKEEDAEEEDGEKKQKTKKVKETVYEWELLNDVKAIW 348 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,475,077 Number of Sequences: 219361 Number of extensions: 1314673 Number of successful extensions: 4376 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3947 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4311 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)