Clone Name | rbastl44b09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein | 32 | 0.53 | 2 | UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3 | 28 | 5.9 | 3 | UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2 | 28 | 5.9 | 4 | UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1 | 28 | 5.9 |
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>TX13B_HUMAN (Q9BXU2) Testis-expressed sequence 13B protein| Length = 312 Score = 31.6 bits (70), Expect = 0.53 Identities = 16/56 (28%), Positives = 28/56 (50%) Frame = +2 Query: 125 HRDGRKENQSVMWLKPPLSLQSLMQLMTCQSIRHDQPQDHVNTDEALLQRK*TDTS 292 HR G+ +N+ V WL+ L L+ ++ + Q + +EA Q + T+TS Sbjct: 80 HRQGQLQNRRVQWLQGFAKLHRSAALVLASNLTELKEQQEMECNEATFQLQLTETS 135
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -2 Query: 306 DVDIPLVSVYFR 271 DVDIPLVSVYFR Sbjct: 1042 DVDIPLVSVYFR 1053
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -2 Query: 306 DVDIPLVSVYFR 271 DVDIPLVSVYFR Sbjct: 1040 DVDIPLVSVYFR 1051
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/12 (100%), Positives = 12/12 (100%) Frame = -2 Query: 306 DVDIPLVSVYFR 271 DVDIPLVSVYFR Sbjct: 1040 DVDIPLVSVYFR 1051 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,948,038 Number of Sequences: 219361 Number of extensions: 802217 Number of successful extensions: 1461 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1461 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)