ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL138653.1|ATT32A11 Arabidopsis thaliana DNA chromosome 3, B... 44 0.24
2gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, r... 44 0.24
3gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, r... 44 0.24
4gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 11... 44 0.24
5gb|AY775453.1| Trichomanes javanicum ribulose-1,5-bisphosphate c... 42 0.95
6gb|AC162458.4| Mus musculus chromosome 19, clone RP24-140G9, com... 42 0.95
7gb|AC127231.4| Mus musculus BAC clone RP24-554M18 from chromosom... 42 0.95
8emb|Z48584.1|CEZK1321 Caenorhabditis elegans Cosmid ZK1321, comp... 42 0.95
9ref|XM_761589.1| Theileria parva strain Muguga chromosome 1 hypo... 42 0.95
10gb|AC102779.6| Mus musculus chromosome 19, clone RP23-460A15, co... 42 0.95
11emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chro... 42 0.95
12gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map... 42 0.95
13gb|AE014179.1| Mus musculus piebald deletion region section 7 of... 42 0.95
14gb|AC009231.4| Homo sapiens BAC clone RP11-350I24 from 2, comple... 42 0.95
15gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y... 42 0.95
16gb|AC135119.4| Mus musculus BAC clone RP24-535H19 from 14, compl... 42 0.95
17gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, comple... 42 0.95
18ref|NM_001037122.1| Danio rerio zgc:123307 (zgc:123307), mRNA 40 3.7
19gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, com... 40 3.7
20gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, com... 40 3.7
21gb|AY688953.1| Pisum sativum phytochrome A apoprotein (PHYA) gen... 40 3.7
22gb|AC127578.4| Mus musculus BAC clone RP23-428L14 from chromosom... 40 3.7
23gb|AC147104.2| Mus musculus BAC clone RP23-466J20 from chromosom... 40 3.7
24gb|AC126258.4| Mus musculus BAC clone RP23-325B8 from chromosome... 40 3.7
25gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome... 40 3.7
26gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosom... 40 3.7
27gb|AC117255.3| Mus musculus BAC clone RP24-481E4 from 3, complet... 40 3.7
28emb|Z99297.1|HS262D12 Human DNA sequence from clone RP1-262D12 o... 40 3.7
29emb|AL513205.8| Human DNA sequence from clone RP11-432E18 on chr... 40 3.7
30emb|AL365495.14| Human DNA sequence from clone RP11-308K19 on ch... 40 3.7
31gb|AC145213.1| Homo sapiens fosmid clone XXFOS-800837B7 from 7, ... 40 3.7
32gb|AC097257.7| Rattus norvegicus X BAC CH230-180I13 (Children's ... 40 3.7
33gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's H... 40 3.7
34gb|AC144434.2| Homo sapiens fosmid clone XXFOS-801207C6 from 7, ... 40 3.7
35emb|BX005427.19| Zebrafish DNA sequence from clone DKEY-24F17 in... 40 3.7
36gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome... 40 3.7
37emb|X14077.1|PSPHY Pea phy gene for phytochrome apoprotein 40 3.7
38gb|AC131025.1| Homo sapiens chromosome 5 clone RP11-394O4, compl... 40 3.7
39gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, co... 40 3.7
40gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence 40 3.7
41gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, co... 40 3.7
42gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer In... 40 3.7
43dbj|AK156442.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 3.7
44gb|AC012613.7| Homo sapiens chromosome 5 clone CTB-162I23, compl... 40 3.7
45gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Canc... 40 3.7
46gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62... 40 3.7
47gb|AC103831.4| Homo sapiens chromosome 8, clone RP11-1023P17, co... 40 3.7
48gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, co... 40 3.7
49emb|BX004974.21| Zebrafish DNA sequence from clone CH211-74A16 i... 40 3.7
50gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, com... 40 3.7
51emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceralde... 40 3.7
52gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete ... 40 3.7
53gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence 40 3.7
54gb|BC107834.1| Danio rerio zgc:123307, mRNA (cDNA clone MGC:1233... 40 3.7
55emb|AJ010694.1|MMU010694 mus musculus Cyrn1 gene, partial intron 6 40 3.7
56dbj|AP002534.1| Homo sapiens genomic DNA, chromosome 1q22-q23, C... 40 3.7
57dbj|AB045361.1| Homo sapiens genomic DNA, chromosome 1q22-q23, c... 40 3.7 
>emb|AL138653.1|ATT32A11 Arabidopsis thaliana DNA chromosome 3, BAC clone T32A11
          Length = 129021

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 139   caaaccaaagctataaacatct 160
             ||||||||||||||||||||||
Sbjct: 60471 caaaccaaagctataaacatct 60450
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>gb|AC009349.6|AC009349 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone
             BACR10O09, complete sequence
          Length = 165555

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 126   tcaaactcaaactcaaaccaaa 147
             ||||||||||||||||||||||
Sbjct: 29106 tcaaactcaaactcaaaccaaa 29085
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>gb|AC008287.4|AC008287 Drosophila melanogaster, chromosome 3R, region 100C-100C, BAC clone
              BACR02G16, complete sequence
          Length = 177480

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 126    tcaaactcaaactcaaaccaaa 147
              ||||||||||||||||||||||
Sbjct: 119036 tcaaactcaaactcaaaccaaa 119015
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>gb|AE003778.3| Drosophila melanogaster chromosome 3R, section 116 of 118 of the complete
              sequence
          Length = 225974

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 126    tcaaactcaaactcaaaccaaa 147
              ||||||||||||||||||||||
Sbjct: 101303 tcaaactcaaactcaaaccaaa 101282
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>gb|AY775453.1| Trichomanes javanicum ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (rbcL) gene, partial
           cds; rbcL-accD intergenic spacer, complete sequence; and
           acetyl-CoA carboxylase beta subunit (accD) gene, partial
           cds; chloroplast
          Length = 1414

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  aagaagaaaccaggagctgtt 104
           |||||||||||||||||||||
Sbjct: 324 aagaagaaaccaggagctgtt 344
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>gb|AC162458.4| Mus musculus chromosome 19, clone RP24-140G9, complete sequence
          Length = 212469

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     ctataacaaataaaataagaa 88
              |||||||||||||||||||||
Sbjct: 144475 ctataacaaataaaataagaa 144495
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>gb|AC127231.4| Mus musculus BAC clone RP24-554M18 from chromosome 18, complete
             sequence
          Length = 140817

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 163   taaccttttcttttcctacccaaac 187
             |||||||||||||||||| ||||||
Sbjct: 23108 taaccttttcttttcctagccaaac 23132
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>emb|Z48584.1|CEZK1321 Caenorhabditis elegans Cosmid ZK1321, complete sequence
          Length = 18828

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    aacaaataaaataagaagaaa 92
             |||||||||||||||||||||
Sbjct: 16874 aacaaataaaataagaagaaa 16894
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>ref|XM_761589.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_1161) partial mRNA
          Length = 5841

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 122  aacttcaaactcaaactcaaa 142
            |||||||||||||||||||||
Sbjct: 3951 aacttcaaactcaaactcaaa 3971
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>gb|AC102779.6| Mus musculus chromosome 19, clone RP23-460A15, complete sequence
          Length = 214504

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 68     ctataacaaataaaataagaa 88
              |||||||||||||||||||||
Sbjct: 163615 ctataacaaataaaataagaa 163635
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>emb|AL356796.16| Human DNA sequence from clone RP11-82I1 on chromosome 9 Contains the 3'
              end of a novel gene (FLJ11985, MGC11337) (KIAA0870), the
              ORM1 gene for orosomucoid 1 (AGP1, AGP-A), the ORM2 gene
              for orosomucoid 2 (AGP2, AGP-B) and the gene for AT-hook
              transcription factor AKNA, complete sequence
          Length = 125673

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 124    cttcaaactcaaactcaaacc 144
              |||||||||||||||||||||
Sbjct: 107898 cttcaaactcaaactcaaacc 107918
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>gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence
          Length = 202316

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 163    taaccttttcttttcctacccaaac 187
              |||||||||||||||||| ||||||
Sbjct: 169802 taaccttttcttttcctagccaaac 169826
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>gb|AE014179.1| Mus musculus piebald deletion region section 7 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 84     aagaagaaaccaggagctgttctct 108
              ||||||||||||| |||||||||||
Sbjct: 208080 aagaagaaaccagaagctgttctct 208104
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>gb|AC009231.4| Homo sapiens BAC clone RP11-350I24 from 2, complete sequence
          Length = 127396

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    tctctataacaaataaaataa 85
             |||||||||||||||||||||
Sbjct: 35986 tctctataacaaataaaataa 36006
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>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence
          Length = 178377

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 64    ctctctataacaaataaaataagaa 88
             |||||||||| ||||||||||||||
Sbjct: 10644 ctctctataaaaaataaaataagaa 10668
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>gb|AC135119.4| Mus musculus BAC clone RP24-535H19 from 14, complete sequence
          Length = 179520

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 84     aagaagaaaccaggagctgttctct 108
              ||||||||||||| |||||||||||
Sbjct: 102889 aagaagaaaccagaagctgttctct 102913
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>gb|AC149059.3| Mus musculus BAC clone RP23-325A2 from 18, complete sequence
          Length = 206973

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 163   taaccttttcttttcctacccaaac 187
             |||||||||||||||||| ||||||
Sbjct: 67241 taaccttttcttttcctagccaaac 67265
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>ref|NM_001037122.1| Danio rerio zgc:123307 (zgc:123307), mRNA
          Length = 1156

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 cgagaacttcaaactcaaac 137
           ||||||||||||||||||||
Sbjct: 402 cgagaacttcaaactcaaac 421
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>gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, complete sequence
          Length = 154808

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    agaaaccaggagctgttctc 107
             ||||||||||||||||||||
Sbjct: 28384 agaaaccaggagctgttctc 28365
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>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence
          Length = 157478

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    agaaaccaggagctgttctc 107
             ||||||||||||||||||||
Sbjct: 47489 agaaaccaggagctgttctc 47508
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>gb|AY688953.1| Pisum sativum phytochrome A apoprotein (PHYA) gene, complete cds
          Length = 6227

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  taacaaataaaataagaagaaacc 94
           |||| |||||||||||||||||||
Sbjct: 357 taaccaataaaataagaagaaacc 380
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>gb|AC127578.4| Mus musculus BAC clone RP23-428L14 from chromosome 15, complete
             sequence
          Length = 206410

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 67    tctataacaaataaaataagaaga 90
             ||||||||||||||||||| ||||
Sbjct: 82268 tctataacaaataaaataacaaga 82245
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>gb|AC147104.2| Mus musculus BAC clone RP23-466J20 from chromosome 14, complete sequence
          Length = 168370

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    tccagcccctctccttgtcc 257
              ||||||||||||||||||||
Sbjct: 158067 tccagcccctctccttgtcc 158086
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>gb|AC126258.4| Mus musculus BAC clone RP23-325B8 from chromosome 14, complete sequence
          Length = 203304

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    tccagcccctctccttgtcc 257
              ||||||||||||||||||||
Sbjct: 126045 tccagcccctctccttgtcc 126026
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>gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome 3, complete
            sequence
          Length = 193517

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  ctactaaccttttcttttcc 178
            ||||||||||||||||||||
Sbjct: 5579 ctactaaccttttcttttcc 5598
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>gb|AC121771.3| Mus musculus BAC clone RP23-348H21 from chromosome 3, complete sequence
          Length = 190309

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   tacccaaacaatctacagat 198
             ||||||||||||||||||||
Sbjct: 75787 tacccaaacaatctacagat 75806
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>gb|AC117255.3| Mus musculus BAC clone RP24-481E4 from 3, complete sequence
          Length = 209706

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   ctactaaccttttcttttcc 178
             ||||||||||||||||||||
Sbjct: 43639 ctactaaccttttcttttcc 43620
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>emb|Z99297.1|HS262D12 Human DNA sequence from clone RP1-262D12 on chromosome 1q23.3-24.3
             Contains the 5' end of the MRPS14 gene for mitochondrial
             ribosomal protein S14, a serologically defined colon
             cancer antigen 3 (SDCCAG3) pseudogene, the 5' end of the
             TNN gene for tenascin N and a CpG island, complete
             sequence
          Length = 100997

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    aaataaaataagaagaaaccagga 98
             ||||||||||||||||| ||||||
Sbjct: 82540 aaataaaataagaagaatccagga 82563
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>emb|AL513205.8| Human DNA sequence from clone RP11-432E18 on chromosome 1 Contains the
              OR6K1P olfactory receptor, family 6, subfamily K, member 1
              pseudogene, the OR6K2 gene for olfactory receptor, family
              6, subfamily K, member 2, the OR6K3 gene for olfactory
              receptor, family 6, subfamily K, member 3, the OR6K4P
              olfactory receptor, family 6, subfamily K, member 4
              pseudogene, the OR6K5P olfactory receptor, family 6,
              subfamily K, member 5 pseudogene, the OR6K6 gene for
              olfactory receptor, family 6, subfamily K, member 6, the
              OR6N1 gene for olfactory receptor, family 6, subfamily N,
              member 1, the OR6N2 gene for olfactory receptor, family 6,
              subfamily N, member 2, the OR2AQ1P olfactory receptor,
              family 2, subfamily AQ, member 1 pseudogene, the OR10AA1P
              olfactory receptor, family 10, subfamily AA, member 1
              pseudogene and the MNDA gene for myeloid cell nuclear
              differentiation antigen, complete sequence
          Length = 180999

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tataacaaataaaataagaa 88
              ||||||||||||||||||||
Sbjct: 159133 tataacaaataaaataagaa 159152
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>emb|AL365495.14| Human DNA sequence from clone RP11-308K19 on chromosome 10 Contains
             part of the gene for a novel protein (FLJ10210), complete
             sequence
          Length = 185049

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    tctctataacaaataaaataagaa 88
             |||||| |||||||||||||||||
Sbjct: 72145 tctctaaaacaaataaaataagaa 72168
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>gb|AC145213.1| Homo sapiens fosmid clone XXFOS-800837B7 from 7, complete sequence
          Length = 41488

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  ccttttcttttcctacccaa 185
            ||||||||||||||||||||
Sbjct: 8903 ccttttcttttcctacccaa 8884
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>gb|AC097257.7| Rattus norvegicus X BAC CH230-180I13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 196137

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     ataacaaataaaataagaagaaac 93
              |||| |||||||||||||||||||
Sbjct: 145608 ataaaaaataaaataagaagaaac 145585
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>gb|AC105487.6| Rattus norvegicus 1 BAC CH230-229J7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 221396

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    cttcaaactcaaactcaaac 143
              ||||||||||||||||||||
Sbjct: 117447 cttcaaactcaaactcaaac 117466
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>gb|AC144434.2| Homo sapiens fosmid clone XXFOS-801207C6 from 7, complete sequence
          Length = 39019

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  ccttttcttttcctacccaa 185
            ||||||||||||||||||||
Sbjct: 3143 ccttttcttttcctacccaa 3124
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>emb|BX005427.19| Zebrafish DNA sequence from clone DKEY-24F17 in linkage group 20
             Contains the gene for a novel protein similar to elastase
             2, the 3' end of the alas2 gene for aminolevulinate,
             delta-, synthetase 2, the gene for a novel elastase
             protein (zgc:637440), two novel genes and two CpG islands,
             complete sequence
          Length = 134851

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 126   tcaaactcaaactcaaaccaaagc 149
             ||||||||||||||||| ||||||
Sbjct: 40461 tcaaactcaaactcaaagcaaagc 40484
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>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete sequence
          Length = 225212

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    tccagcccctctccttgtcc 257
              ||||||||||||||||||||
Sbjct: 202550 tccagcccctctccttgtcc 202531
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>emb|X14077.1|PSPHY Pea phy gene for phytochrome apoprotein
          Length = 6264

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 71  taacaaataaaataagaagaaacc 94
           |||| |||||||||||||||||||
Sbjct: 381 taaccaataaaataagaagaaacc 404
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>gb|AC131025.1| Homo sapiens chromosome 5 clone RP11-394O4, complete sequence
          Length = 179633

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 191    ctacagatctcttcttcatcatca 214
              ||||||||||||||||||| ||||
Sbjct: 129174 ctacagatctcttcttcatgatca 129151
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>gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, complete sequence
          Length = 188788

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 234   tggttccagcccctctccttgtcc 257
             |||||||| |||||||||||||||
Sbjct: 94352 tggttccaacccctctccttgtcc 94329
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>gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence
          Length = 176040

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    cccaaacaatctacagatct 200
              ||||||||||||||||||||
Sbjct: 117814 cccaaacaatctacagatct 117833
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>gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, complete sequence
          Length = 207418

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   cccaaacaatctacagatct 200
             ||||||||||||||||||||
Sbjct: 98700 cccaaacaatctacagatct 98719
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>gb|AC097335.3| Chimpanzee BAC RP43-23J16 (Roswell Park Cancer Institute Chimpanzee BAC
              Library) complete sequence
          Length = 148984

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    taaccttttcttttcctacc 182
              ||||||||||||||||||||
Sbjct: 142988 taaccttttcttttcctacc 143007
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>dbj|AK156442.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830021P15 product:phenylalanine-tRNA
            synthetase-like, alpha subunit, full insert sequence
          Length = 3753

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agaaaccaggagctgttctc 107
            ||||||||||||||||||||
Sbjct: 3697 agaaaccaggagctgttctc 3716
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>gb|AC012613.7| Homo sapiens chromosome 5 clone CTB-162I23, complete sequence
          Length = 164550

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   ctacagatctcttcttcatcatca 214
             ||||||||||||||||||| ||||
Sbjct: 32214 ctacagatctcttcttcatgatca 32191
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>gb|AC158545.2| Mus musculus 10 BAC RP24-401G4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 203847

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     caaataaaataagaagaaac 93
              ||||||||||||||||||||
Sbjct: 176592 caaataaaataagaagaaac 176611
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>gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62D2, complete sequence
          Length = 177762

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 234   tggttccagcccctctccttgtcc 257
             |||||||| |||||||||||||||
Sbjct: 82086 tggttccaacccctctccttgtcc 82063
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>gb|AC103831.4| Homo sapiens chromosome 8, clone RP11-1023P17, complete sequence
          Length = 206357

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     tataacaaataaaataagaa 88
              ||||||||||||||||||||
Sbjct: 142162 tataacaaataaaataagaa 142143
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>gb|AC009090.12| Homo sapiens chromosome 16 clone RP11-407G23, complete sequence
          Length = 198253

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     ccaaatctctctataacaaa 77
              ||||||||||||||||||||
Sbjct: 140307 ccaaatctctctataacaaa 140326
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>emb|BX004974.21| Zebrafish DNA sequence from clone CH211-74A16 in linkage group 18,
              complete sequence
          Length = 186303

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    tctactaaccttttcttttc 177
              ||||||||||||||||||||
Sbjct: 159397 tctactaaccttttcttttc 159378
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>gb|AC023825.8| Homo sapiens chromosome 16 clone RP11-322D14, complete sequence
          Length = 217521

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    ccaaatctctctataacaaa 77
             ||||||||||||||||||||
Sbjct: 55993 ccaaatctctctataacaaa 56012
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>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 8839

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  tcaaactcaaactcaaacca 145
            ||||||||||||||||||||
Sbjct: 5755 tcaaactcaaactcaaacca 5774
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>gb|AC154173.3| Mus musculus BAC clone RP23-3C4 from 3, complete sequence
          Length = 214016

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   tacccaaacaatctacagat 198
             ||||||||||||||||||||
Sbjct: 22795 tacccaaacaatctacagat 22776
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>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence
          Length = 181627

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    caaatctctctataacaaat 78
             ||||||||||||||||||||
Sbjct: 55053 caaatctctctataacaaat 55034
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>gb|BC107834.1| Danio rerio zgc:123307, mRNA (cDNA clone MGC:123307 IMAGE:7089137),
           complete cds
          Length = 1156

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 cgagaacttcaaactcaaac 137
           ||||||||||||||||||||
Sbjct: 402 cgagaacttcaaactcaaac 421
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>emb|AJ010694.1|MMU010694 mus musculus Cyrn1 gene, partial intron 6
          Length = 594

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  agaaaccaggagctgttctc 107
           ||||||||||||||||||||
Sbjct: 389 agaaaccaggagctgttctc 370
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>dbj|AP002534.1| Homo sapiens genomic DNA, chromosome 1q22-q23, CD1 region, section 3/4
          Length = 300000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    tataacaaataaaataagaa 88
             ||||||||||||||||||||
Sbjct: 78237 tataacaaataaaataagaa 78256
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>dbj|AB045361.1| Homo sapiens genomic DNA, chromosome 1q22-q23, clone:713i11, complete
              sequence
          Length = 148081

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tataacaaataaaataagaa 88
              ||||||||||||||||||||
Sbjct: 125340 tataacaaataaaataagaa 125359


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,423,146
Number of Sequences: 3902068
Number of extensions: 4423146
Number of successful extensions: 102926
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102805
Number of HSP's gapped (non-prelim): 121
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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