ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UD... 31 1.3
2M4K5_HUMAN (Q9Y4K4) Mitogen-activated protein kinase kinase kina... 30 2.9
3M4K5_MOUSE (Q8BPM2) Mitogen-activated protein kinase kinase kina... 30 2.9
4PWP1_YEAST (P21304) Periodic tryptophan protein 1 30 3.8
5M4K3_RAT (Q924I2) Mitogen-activated protein kinase kinase kinase... 29 6.4
6M4K3_MOUSE (Q99JP0) Mitogen-activated protein kinase kinase kina... 29 6.4
7M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kina... 28 8.4

>SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP|
           glucosyltransferase 1)
          Length = 807

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 32/100 (32%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
 Frame = -2

Query: 448 RELLSAEMHLKSSLKQATDFSGTEEYKS----LNDCLDQLRGLIGAA*SY*YLGCEPRSL 281
           R L S     K SL    +F     YK     LND +  LRGL  A      L      L
Sbjct: 159 RHLSSKLFQDKESLYPLLNFLKAHNYKGTTMILNDRIQSLRGLQSA------LRKAEEYL 212

Query: 280 CHIAYHRPFINDKHR-QVASSDGLYSSSARRVHQTLYLLL 164
             I    P     HR Q    +  +  +A+RVH T++LLL
Sbjct: 213 VSIPEDTPSSEFNHRFQELGLEKGWGDTAKRVHDTIHLLL 252



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>M4K5_HUMAN (Q9Y4K4) Mitogen-activated protein kinase kinase kinase kinase 5|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 5) (MEK
           kinase kinase 5) (MEKKK 5) (Kinase homologous to
           SPS1/STE20) (KHS)
          Length = 846

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -2

Query: 334 LIGAA*SY*YLGCEPRSLCHIAYHRPFINDKHRQVASSDGLYSSSARRVHQTLYLLLFCY 155
           L+GA  S  + GC  +  C  ++  P   D++    + DG+Y+ +   +H+     LF  
Sbjct: 493 LMGACFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPR 552

Query: 154 SC 149
            C
Sbjct: 553 KC 554



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>M4K5_MOUSE (Q8BPM2) Mitogen-activated protein kinase kinase kinase kinase 5|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 5) (MEK
           kinase kinase 5) (MEKKK 5)
          Length = 847

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = -2

Query: 334 LIGAA*SY*YLGCEPRSLCHIAYHRPFINDKHRQVASSDGLYSSSARRVHQTLYLLLFCY 155
           L+GA  S  + GC  +  C  ++  P   D++    + DG+Y+ +   +H+     LF  
Sbjct: 494 LMGACFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPR 553

Query: 154 SC 149
            C
Sbjct: 554 KC 555



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>PWP1_YEAST (P21304) Periodic tryptophan protein 1|
          Length = 576

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 246 TSIVKSHHPMVYTQVRHEEYTRPFIYSCSVIHVGRLLNVSAHNPARS 106
           T  + +HH      + H +Y R  + S S  H  +L ++++ N ARS
Sbjct: 278 TGHITTHHTDAVLSMAHNKYFRSVLASTSADHTVKLWDLNSGNAARS 324



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>M4K3_RAT (Q924I2) Mitogen-activated protein kinase kinase kinase kinase 3|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK
           kinase kinase 3) (MEKKK 3) (Germinal center
           kinase-related protein kinase) (GLK) (Fragment)
          Length = 862

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -2

Query: 331 IGAA*SY*YLGCEPRSLCHIAYHRPFINDKHRQVASSDGLYSSSARRVHQTLYLLLFCYS 152
           +GA  S  + GC  +  C  ++  P   D++    + +G+Y+ +   +H+T    LF   
Sbjct: 512 MGACFSKVFNGCPLKIHCATSWINPDTRDQYLIFGAEEGIYTLNLNELHETSMEQLFPRR 571

Query: 151 C 149
           C
Sbjct: 572 C 572



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>M4K3_MOUSE (Q99JP0) Mitogen-activated protein kinase kinase kinase kinase 3|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK
           kinase kinase 3) (MEKKK 3) (Germinal center
           kinase-related protein kinase) (GLK) (Fragments)
          Length = 681

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -2

Query: 331 IGAA*SY*YLGCEPRSLCHIAYHRPFINDKHRQVASSDGLYSSSARRVHQTLYLLLFCYS 152
           +GA  S  + GC  +  C  ++  P   D++    + +G+Y+ +   +H+T    LF   
Sbjct: 331 MGACFSKVFNGCPLKIHCATSWINPDTRDQYLIFGAEEGIYTLNLNELHETSMEQLFPRR 390

Query: 151 C 149
           C
Sbjct: 391 C 391



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>M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kinase kinase 3|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK
           kinase kinase 3) (MEKKK 3) (Germinal center
           kinase-related protein kinase) (GLK)
          Length = 894

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -2

Query: 331 IGAA*SY*YLGCEPRSLCHIAYHRPFINDKHRQVASSDGLYSSSARRVHQTLYLLLFCYS 152
           +GA  S  + GC  +  C  ++  P   D++    + +G+Y+ +   +H+T    LF   
Sbjct: 544 MGACFSKVFNGCPLKIHCASSWINPDTRDQYLIFGAEEGIYTLNLNELHETSMEQLFPRR 603

Query: 151 C 149
           C
Sbjct: 604 C 604


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,153,765
Number of Sequences: 219361
Number of extensions: 1110486
Number of successful extensions: 2453
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2453
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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