ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl44a12 |
|---|---|
| Clone Library Name | barley_pub |
>VD10_SFVKA (P32097) Protein D10| Length = 260 Score = 31.2 bits (69), Expect = 0.69 Identities = 20/64 (31%), Positives = 29/64 (45%) Frame = +2 Query: 56 TGMQNQAVDWSSKRLKKILEIATSSNMFLAQSNVHQALPI*STTTEDLFKMNTCFITTTK 235 TG NQ + WS+K L ++T N F+A S H L +F+ F+T T+ Sbjct: 37 TGFSNQRLRWSNKT-SICLILSTLDNKFIACSRKHSFLYSEIVRCRSVFRKKRLFLTYTR 95 Query: 236 LPPK 247 K Sbjct: 96 FLKK 99
>TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1248 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 37 LVNKGHYRYAKPGSRLVEQK-IKKNTRNCYQFKYVFSTKQCTPGSTN 174 LVNK + R K ++LVE+K K+N +NC Q + C + N Sbjct: 1189 LVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTEN 1235
>TPP2_HUMAN (P29144) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1248 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 37 LVNKGHYRYAKPGSRLVEQK-IKKNTRNCYQFKYVFSTKQCTPGSTN 174 LVNK + R K ++LVE+K K+N +NC Q + C + N Sbjct: 1189 LVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTEN 1235
>TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10)| (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl aminopeptidase) Length = 1261 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +1 Query: 37 LVNKGHYRYAKPGSRLVEQK-IKKNTRNCYQFKYVFSTKQCTPGSTN 174 LVNK + R K ++LVE+K K+N +NC Q + C + N Sbjct: 1202 LVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTEN 1248
>CVP4_PIMHY (Q8T0W2) Pacifastin-like protease inhibitor cvp4 precursor| (Cysteine-rich venom protein 4) Length = 203 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +1 Query: 49 GHYRYAKPGSRLVEQKIKKNTRNC---YQFKYVFSTKQCTPG 165 G ++ KPG + E++ KKN C FKY + QC G Sbjct: 65 GTRKFPKPGKWISEKENKKNDEPCTPGENFKYYCNDCQCLDG 106
>RPOA_SACOF (Q6ENT2) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase alpha subunit) (RNA polymerase alpha subunit) Length = 339 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 110 LEIATSSNMFLAQSNVHQALPI*STTTEDLFKMNTCFITTTKL 238 LE+ + + L ++N+H L + S T EDL ++N+ + KL Sbjct: 277 LELPSRTYNCLKRANIHTLLDLLSKTEEDLMRINSFRMEDGKL 319
>RPOA_SACHY (Q6L370) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase alpha subunit) (RNA polymerase alpha subunit) Length = 339 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 110 LEIATSSNMFLAQSNVHQALPI*STTTEDLFKMNTCFITTTKL 238 LE+ + + L ++N+H L + S T EDL ++N+ + KL Sbjct: 277 LELPSRTYNCLKRANIHTLLDLLSKTEEDLMRINSFRMEDGKL 319
>KLP8_SCHPO (Q9UTL2) Kinesin-like protein 8| Length = 511 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 179 STTTEDLFKMNTCFITTTKLPPKSTCAHARHGN 277 S + EDL +++ T T PPK H+RH N Sbjct: 21 SKSAEDLLSVDSHNKTVTITPPKHGLKHSRHKN 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,314,180 Number of Sequences: 219361 Number of extensions: 900308 Number of successful extensions: 2191 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2187 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
