>ref|XM_509234.1| PREDICTED: Pan troglodytes similar to neuron navigator 3; pore
            membrane and/or filament interacting like protein 1;
            steerin 3 (LOC452091), mRNA
          Length = 1964

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tttcaccagattcagaaaag 188
            ||||||||||||||||||||
Sbjct: 1267 tttcaccagattcagaaaag 1248

>ref|XM_607306.2| PREDICTED: Bos taurus similar to neuron navigator 3 (LOC528870), mRNA
          Length = 2700

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tttcaccagattcagaaaag 188
            ||||||||||||||||||||
Sbjct: 1447 tttcaccagattcagaaaag 1428

>ref|NM_014903.3| Homo sapiens neuron navigator 3 (NAV3), mRNA
          Length = 9644

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tttcaccagattcagaaaag 188
            ||||||||||||||||||||
Sbjct: 1312 tttcaccagattcagaaaag 1293

>gb|BC017667.2| Homo sapiens neuron navigator 3, mRNA (cDNA clone IMAGE:3914378),
            partial cds
          Length = 2600

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tttcaccagattcagaaaag 188
            ||||||||||||||||||||
Sbjct: 1817 tttcaccagattcagaaaag 1798

>gb|AC109192.9| Mus musculus, clone RP24-360F5, complete sequence
          Length = 163237

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tgatcaagagcaatggctca 26
             ||||||||||||||||||||
Sbjct: 84034 tgatcaagagcaatggctca 84015

>ref|XM_966847.1| PREDICTED: Tribolium castaneum similar to CG10255-PA (LOC660631),
           mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  ttgttcagtttgtcaatgtt 84
           ||||||||||||||||||||
Sbjct: 329 ttgttcagtttgtcaatgtt 310

>emb|AJ488201.1|HSA488201 Homo sapiens mRNA for steerin3 protein (STEERIN3 gene)
          Length = 8864

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tttcaccagattcagaaaag 188
            ||||||||||||||||||||
Sbjct: 1312 tttcaccagattcagaaaag 1293

>gb|AF397731.1| Homo sapiens neuron navigator 3 (NAV3) mRNA, partial cds
          Length = 6849

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 169  tttcaccagattcagaaaag 188
            ||||||||||||||||||||
Sbjct: 1024 tttcaccagattcagaaaag 1005

>dbj|AK127773.1| Homo sapiens cDNA FLJ45874 fis, clone OCBBF3007078
          Length = 3217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 245  tttgctgagcccaagatatg 264
            ||||||||||||||||||||
Sbjct: 2848 tttgctgagcccaagatatg 2867

>gb|AC108164.5| Homo sapiens BAC clone RP11-714F4 from 4, complete sequence
          Length = 111729

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttgttcagtttgtcaatgtt 84
             ||||||||||||||||||||
Sbjct: 61044 ttgttcagtttgtcaatgtt 61025

>gb|AC022268.5| Homo sapiens BAC clone RP11-494K17 from 12, complete sequence
          Length = 192952

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    tttcaccagattcagaaaag 188
              ||||||||||||||||||||
Sbjct: 145217 tttcaccagattcagaaaag 145198

>gb|AC107048.3| Homo sapiens BAC clone RP11-21I10 from 4, complete sequence
          Length = 86165

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttgttcagtttgtcaatgtt 84
             ||||||||||||||||||||
Sbjct: 69132 ttgttcagtttgtcaatgtt 69113

>gb|AC078822.28| Homo sapiens 12 BAC RP11-216I5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166825

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   tttcaccagattcagaaaag 188
             ||||||||||||||||||||
Sbjct: 11596 tttcaccagattcagaaaag 11615

>gb|AC016673.5| Homo sapiens BAC clone RP11-17N4 from 2, complete sequence
          Length = 185332

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 245    tttgctgagcccaagatatg 264
              ||||||||||||||||||||
Sbjct: 169312 tttgctgagcccaagatatg 169293

>gb|AC154489.2| Mus musculus BAC clone RP23-205G15 from chromosome 14, complete
             sequence
          Length = 210483

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 253   gcccaagatatgcaggacct 272
             ||||||||||||||||||||
Sbjct: 51604 gcccaagatatgcaggacct 51623


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,660,960
Number of Sequences: 3902068
Number of extensions: 2660960
Number of successful extensions: 48272
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48257
Number of HSP's gapped (non-prelim): 15
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)