>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)|
           (PEM) (PEMT) (Episialin) (Tumor-associated mucin)
           (Carcinoma-associated mucin) (Tumor-associated
           epithelial membrane antigen) (EMA) (H23AG)
           (Peanut-reactive urinary mucin) (PUM)
          Length = 1255

 Score = 34.3 bits (77), Expect = 0.078
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 79  RDIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRSPQHSKASTAADNKP 234
           +D+ +V VTR A    +P     T+A DNKP  G    P H   ++A D +P
Sbjct: 96  QDVTSVPVTRPALGSTTPPAHDVTSAPDNKPAPGSTAPPAHG-VTSAPDTRP 146

>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 704

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 127 SPQHSRATTAADNKPLAGFNRSPQHSKASTAADNKPPAVQQIP*KKHSSCTPKLRCRS-L 303
           +P+   A   A  K  AG  + PQ  KA +++  +  +  +    K S  TPK R  +  
Sbjct: 403 TPKPPAAKAVATPKQPAGSGQKPQSRKADSSSSEEESSSSEEEATKKSVTTPKARVTAKA 462

Query: 304 LRLLPTRQCP 333
              LP +Q P
Sbjct: 463 APSLPAKQAP 472

>MUC1_HYLLA (Q29435) Mucin-1 precursor (MUC-1)|
          Length = 475

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +1

Query: 79  RDIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRSPQHSKASTAADNKP 234
           +D+ +V VTR A    +      T+A D +P  G    P H   ++A D +P
Sbjct: 96  QDVTSVPVTRPAPGSTTSPAQDVTSAPDTRPALGSTAPPVHG-VTSAPDTRP 146

>MKNK2_RAT (Q5U2N4) MAP kinase-interacting serine/threonine-protein kinase 2|
           (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2)
           (Mnk2)
          Length = 459

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 188 GAHNTLKQALLLITNHRQCSRYHEKSIAHVHLNYAAEASS--DCCQHDNALPLV 343
           GAH  ++  + LITN     +  EK + H+      E      C  H N L L+
Sbjct: 93  GAHARVQTCVNLITNQEYAVKIIEKQLGHIRSRVFREVEMLYQCQGHRNVLELI 146

>MKNK2_MOUSE (Q8CDB0) MAP kinase-interacting serine/threonine-protein kinase 2|
           (EC 2.7.11.1) (MAP kinase signal-integrating kinase 2)
           (Mnk2)
          Length = 459

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 188 GAHNTLKQALLLITNHRQCSRYHEKSIAHVHLNYAAEASS--DCCQHDNALPLV 343
           GAH  ++  + LITN     +  EK + H+      E      C  H N L L+
Sbjct: 93  GAHARVQTCVNLITNQEYAVKIIEKQLGHIRSRVFREVEMLYQCQGHRNVLELI 146

>LAB_DROME (P10105) Homeotic protein labial (F24) (F90-2)|
          Length = 635

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +1

Query: 112 AGFKRSPQHSRATTAADNKPLAGFNRSPQHSKAST--AADNKPPAVQQIP*KKHSSCTPK 285
           A  ++  Q+S +     N+   G   SP  S +S+  A++   PA  Q     HSS  P 
Sbjct: 332 AAHQQHHQNSVSPNGGMNRQQRGGVISPGSSTSSSTSASNGAHPASTQSKSPNHSSSIPT 391

Query: 286 LRCRSLLRLLPTRQCPS 336
            +   L R +P  Q PS
Sbjct: 392 YKWMQLKRNVPKPQAPS 408

>H12_MOUSE (P15864) Histone H1.2 (H1 VAR.1) (H1c)|
          Length = 211

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = +1

Query: 163 NKPLAGFNRSPQHSKASTAADNKPPAVQQIP*KKHSSCTPK 285
           NK  A     PQ  KA  A   KP    + P K   + TPK
Sbjct: 107 NKKAASGEAKPQAKKAGAAKAKKPAGAAKKPKKATGAATPK 147

>ESMC_DROME (Q01070) Enhancer of split mgamma protein (E(spl)mgamma)|
           (HLH-mgamma) (Split locus enhancer protein mB)
          Length = 205

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 82  DIITVAVTRLAGFKRSPQHSRATTAADNKPLAGFNRSPQHS 204
           DI+ + VT L   K+  QH RA+      P  GF     H+
Sbjct: 60  DILELTVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHA 100

>NH153_CAEEL (O01929) Nuclear hormone receptor family member nhr-153|
          Length = 415

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 280 PKLRCRSLLRLLPTRQCPSSC 342
           PK   R + ++LP  QCPS C
Sbjct: 9   PKRNRRKIYKILPQNQCPSVC 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,832,593
Number of Sequences: 219361
Number of extensions: 796338
Number of successful extensions: 1871
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)