ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue 208 1e-50
2gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, com... 44 0.35
3gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, comple... 44 0.35
4ref|XM_763929.1| Giardia lamblia ATCC 50803 myosin heavy chain (... 44 0.35
5gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Canc... 44 0.35
6gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cance... 44 0.35
7ref|XM_689464.1| PREDICTED: Danio rerio similar to CG8779-PA (LO... 44 0.35
8gb|AC104874.11| Mus musculus chromosome 3, clone RP23-453I14, co... 44 0.35
9gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 ... 44 0.35
10emb|AL928800.5| Zebrafish DNA sequence from clone CH211-233G21 i... 44 0.35
11gb|DP000016.1| Pan troglodytes target 1 genomic scaffold 42 1.4
12gb|AC087512.2| Pan troglodytes clone RP43-144M20, complete sequence 42 1.4
13gb|AC147106.2| Pan troglodytes BAC clone RP43-15F7 from 7, compl... 42 1.4
14gb|AC146205.2| Pan troglodytes BAC clone RP43-34B6 from 7, compl... 42 1.4
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
16dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
19dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Canc... 42 1.4
21gb|AC156506.4| Mus musculus 6 BAC RP24-266P6 (Roswell Park Cance... 42 1.4
22gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 40 5.4
23gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome... 40 5.4
24ref|XM_515997.1| PREDICTED: Pan troglodytes similar to transmemb... 40 5.4
25gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 5.4
26gb|AE006425.1| Lactococcus lactis subsp. lactis IL1403 section 1... 40 5.4
27gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosom... 40 5.4
28emb|BX927308.14| Zebrafish DNA sequence from clone DKEY-16M19 in... 40 5.4
29gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosom... 40 5.4
30emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 i... 40 5.4
31gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complet... 40 5.4
32gb|AF323672.1| Bacteriophage bIL311, complete genome 40 5.4
33ref|XM_737529.1| Plasmodium chabaudi chabaudi Pc-fam-1 protein (... 40 5.4
34gb|AC117810.8| Mus musculus chromosome 18, clone RP24-571D2, com... 40 5.4
35emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 ... 40 5.4
36emb|AL589706.13| Human DNA sequence from clone RP11-522P6 on chr... 40 5.4
37emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
38emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in ... 40 5.4
39emb|CR384108.7| Zebrafish DNA sequence from clone DKEYP-26H11 in... 40 5.4
40emb|CR388079.8| Zebrafish DNA sequence from clone DKEY-29F21 in ... 40 5.4
41gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, compl... 40 5.4
42emb|BX323995.13| Zebrafish DNA sequence from clone RP71-86K19 in... 40 5.4
43emb|AL929400.6| Zebrafish DNA sequence from clone CH211-175M24, ... 40 5.4
44gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, co... 40 5.4
45gb|AC108930.3| Homo sapiens BAC clone RP11-204C12 from 4, comple... 40 5.4
46gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, comple... 40 5.4
47gb|AC061975.6| Homo sapiens chromosome 17, clone CTD-2008P7, com... 40 5.4
48gb|AC018600.6| Homo sapiens, clone RP11-26L8, complete sequence 40 5.4
49gb|AY864330.1| Chrysodeixis chalcites nucleopolyhedrovirus, comp... 40 5.4
50gb|AF275938.1|AF275938 Carnobacterium piscicola putative piscico... 40 5.4
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
52gb|AC156950.4| Mus musculus 10 BAC RP24-329N2 (Roswell Park Canc... 40 5.4
53emb|AJ223307.1|BNAJ3307 Brassica napus gene encoding induced myr... 40 5.4
54emb|AL953893.17| Zebrafish DNA sequence from clone DKEY-60B12, c... 40 5.4
55gb|AC002094.1|AC002094 Genomic sequence from Human 17, complete ... 40 5.4
56dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.4
57dbj|AP006639.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.4
58dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 5.4
59emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chro... 40 5.4 
>emb|X67960.1|HVGRP94HO H.vulgare mRNA for GRP94 homologue
          Length = 2682

 Score =  208 bits (105), Expect = 1e-50
 Identities = 105/105 (100%)
 Strand = Plus / Minus

                                                                        
Query: 299  tgcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagt 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2682 tgcacgctaattccaactagctagggtatcgtcattaaacaagaaactaggtacagtagt 2623

                                                         
Query: 359  acattacacggacaaaaccccccgtatcacgatcgatgattaatc 403
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2622 acattacacggacaaaaccccccgtatcacgatcgatgattaatc 2578
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>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence
          Length = 156835

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 149    taataaaatataaaaattcagt 170
              ||||||||||||||||||||||
Sbjct: 140565 taataaaatataaaaattcagt 140586
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>gb|AC121986.2| Mus musculus BAC clone RP24-293I7 from 10, complete sequence
          Length = 182686

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 249    tataaaagtatacaaaacaaaa 270
              ||||||||||||||||||||||
Sbjct: 144848 tataaaagtatacaaaacaaaa 144827
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>ref|XM_763929.1| Giardia lamblia ATCC 50803 myosin heavy chain (GLP_435_15419_8625)
            partial mRNA
          Length = 6795

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 46   cgatttcggcaccacaaaatcc 67
            ||||||||||||||||||||||
Sbjct: 5486 cgatttcggcaccacaaaatcc 5507
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>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 142650

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 246   gcatataaaagtatacaaaaca 267
             ||||||||||||||||||||||
Sbjct: 24483 gcatataaaagtatacaaaaca 24504
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>gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208610

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 249    tataaaagtatacaaaacaaaa 270
              ||||||||||||||||||||||
Sbjct: 196523 tataaaagtatacaaaacaaaa 196544
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>ref|XM_689464.1| PREDICTED: Danio rerio similar to CG8779-PA (LOC566194), mRNA
          Length = 1213

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 272 ggcgcttctgactgaggaaacc 293
           ||||||||||||||||||||||
Sbjct: 83  ggcgcttctgactgaggaaacc 104
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>gb|AC104874.11| Mus musculus chromosome 3, clone RP23-453I14, complete sequence
          Length = 182940

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 149  taataaaatataaaaattcagt 170
            ||||||||||||||||||||||
Sbjct: 9095 taataaaatataaaaattcagt 9116
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>gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 (LBNL H220), complete sequence
          Length = 87857

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 3     tataaaatggggcaaataatcc 24
             ||||||||||||||||||||||
Sbjct: 25150 tataaaatggggcaaataatcc 25129
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>emb|AL928800.5| Zebrafish DNA sequence from clone CH211-233G21 in linkage group 1,
             complete sequence
          Length = 153880

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 272   ggcgcttctgactgaggaaacc 293
             ||||||||||||||||||||||
Sbjct: 66918 ggcgcttctgactgaggaaacc 66939
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>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold
          Length = 1623484

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    aataaaatataaaaattcagt 170
              |||||||||||||||||||||
Sbjct: 245370 aataaaatataaaaattcagt 245350
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>gb|AC087512.2| Pan troglodytes clone RP43-144M20, complete sequence
          Length = 120797

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   aataaaatataaaaattcagt 170
             |||||||||||||||||||||
Sbjct: 34548 aataaaatataaaaattcagt 34528
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>gb|AC147106.2| Pan troglodytes BAC clone RP43-15F7 from 7, complete sequence
          Length = 193107

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    aataaaatataaaaattcagt 170
              |||||||||||||||||||||
Sbjct: 180037 aataaaatataaaaattcagt 180057
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>gb|AC146205.2| Pan troglodytes BAC clone RP43-34B6 from 7, complete sequence
          Length = 187725

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   aataaaatataaaaattcagt 170
             |||||||||||||||||||||
Sbjct: 45548 aataaaatataaaaattcagt 45528
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 250      ataaaagtatacaaaacaaaa 270
                |||||||||||||||||||||
Sbjct: 19371770 ataaaagtatacaaaacaaaa 19371750



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 250     ataaaagtatacaaaacaaaa 270
               |||||||||||||||||||||
Sbjct: 9423800 ataaaagtatacaaaacaaaa 9423780
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 250      ataaaagtatacaaaacaaaa 270
                |||||||||||||||||||||
Sbjct: 17463547 ataaaagtatacaaaacaaaa 17463527
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>dbj|AP004155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1112_D12
          Length = 97572

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 250   ataaaagtatacaaaacaaaa 270
             |||||||||||||||||||||
Sbjct: 48391 ataaaagtatacaaaacaaaa 48371
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0434A03
          Length = 146505

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    ataaaagtatacaaaacaaaa 270
              |||||||||||||||||||||
Sbjct: 131771 ataaaagtatacaaaacaaaa 131751
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>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0685B10
          Length = 148544

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 250    ataaaagtatacaaaacaaaa 270
              |||||||||||||||||||||
Sbjct: 101213 ataaaagtatacaaaacaaaa 101193
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>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205164

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 146    cattaataaaatataaaaatt 166
              |||||||||||||||||||||
Sbjct: 174400 cattaataaaatataaaaatt 174420
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>gb|AC156506.4| Mus musculus 6 BAC RP24-266P6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 164284

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 146    cattaataaaatataaaaatt 166
              |||||||||||||||||||||
Sbjct: 154869 cattaataaaatataaaaatt 154849
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 148     ttaataaaatataaaaattcagta 171
               ||||||||||||||||| ||||||
Sbjct: 1123244 ttaataaaatataaaaactcagta 1123221
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>gb|AC169509.1| Mus musculus BAC clone RP23-137L8 from chromosome 16, complete sequence
          Length = 206061

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 234    caaaccaaaacagcatataaaagt 257
              ||||||||||||| ||||||||||
Sbjct: 190918 caaaccaaaacagaatataaaagt 190941
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>ref|XM_515997.1| PREDICTED: Pan troglodytes similar to transmembrane protein with
            EGF-like and two follistatin-like domains 2; putative
            transmembrane protein with EGF-like and two
            follistatin-like domains 2; transmembrane protein TENB2;
            tomoregulin (LOC459837), mRNA
          Length = 1225

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 142  cctgcattaataaaatataaaaat 165
            ||||||||||||||| ||||||||
Sbjct: 1193 cctgcattaataaaaaataaaaat 1216
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 7      aaatggggcaaataatccatttcc 30
              ||||||||||||| ||||||||||
Sbjct: 504583 aaatggggcaaatcatccatttcc 504606
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>gb|AE006425.1| Lactococcus lactis subsp. lactis IL1403 section 187 of 218 of the
            complete genome
          Length = 10188

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 248  atataaaagtatacaaaacaaaag 271
            ||||||||| ||||||||||||||
Sbjct: 1244 atataaaagaatacaaaacaaaag 1267
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>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence
          Length = 176549

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 343   aactaggtacagtagtacat 362
             ||||||||||||||||||||
Sbjct: 13547 aactaggtacagtagtacat 13528
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>emb|BX927308.14| Zebrafish DNA sequence from clone DKEY-16M19 in linkage group 22,
             complete sequence
          Length = 220546

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   atataaaagtatacaaaacaaaag 271
             ||||||||||||||| ||||||||
Sbjct: 45779 atataaaagtatacacaacaaaag 45756
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>gb|AC125049.3| Mus musculus BAC clone RP23-367C15 from chromosome 9, complete sequence
          Length = 211511

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   tcattaaacaagaaactagg 349
             ||||||||||||||||||||
Sbjct: 83603 tcattaaacaagaaactagg 83584
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>emb|BX957306.12| Zebrafish DNA sequence from clone DKEY-119H24 in linkage group 1,
              complete sequence
          Length = 224487

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ctgcattaataaaatataaa 162
              ||||||||||||||||||||
Sbjct: 216801 ctgcattaataaaatataaa 216782
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>gb|AC115355.3| Mus musculus BAC clone RP23-14J16 from 9, complete sequence
          Length = 179362

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    aactaggtacagtagtacat 362
              ||||||||||||||||||||
Sbjct: 148078 aactaggtacagtagtacat 148059
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>gb|AF323672.1| Bacteriophage bIL311, complete genome
          Length = 14510

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 248  atataaaagtatacaaaacaaaag 271
            ||||||||| ||||||||||||||
Sbjct: 1308 atataaaagaatacaaaacaaaag 1285
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>ref|XM_737529.1| Plasmodium chabaudi chabaudi Pc-fam-1 protein (PC100211.00.0)
           partial mRNA
          Length = 159

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 taaaagtatacaaaacaaaa 270
           ||||||||||||||||||||
Sbjct: 132 taaaagtatacaaaacaaaa 151
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>gb|AC117810.8| Mus musculus chromosome 18, clone RP24-571D2, complete sequence
          Length = 207527

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    taaaatataaaaattcagta 171
              ||||||||||||||||||||
Sbjct: 137148 taaaatataaaaattcagta 137167
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>emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 in linkage group 11,
             complete sequence
          Length = 198825

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   aataaaatataaaaattcag 169
             ||||||||||||||||||||
Sbjct: 81648 aataaaatataaaaattcag 81629
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>emb|AL589706.13| Human DNA sequence from clone RP11-522P6 on chromosome X, complete
             sequence
          Length = 119907

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   ataaaatataaaaattcagt 170
             ||||||||||||||||||||
Sbjct: 46813 ataaaatataaaaattcagt 46832
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>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03,
             complete sequence
          Length = 175555

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 152   taaaatataaaaattcagtacgag 175
             |||||||||| |||||||||||||
Sbjct: 35837 taaaatataacaattcagtacgag 35814
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>emb|BX548042.7| Zebrafish DNA sequence from clone DKEY-146L4 in linkage group 20 Contains
              a novel gene and four CpG islands, complete sequence
          Length = 224072

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    gcattaataaaatataaaaa 164
              ||||||||||||||||||||
Sbjct: 114341 gcattaataaaatataaaaa 114360
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>emb|CR384108.7| Zebrafish DNA sequence from clone DKEYP-26H11 in linkage group 22,
             complete sequence
          Length = 167824

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   atataaaagtatacaaaacaaaag 271
             ||||||||||||||| ||||||||
Sbjct: 67696 atataaaagtatacacaacaaaag 67673
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>emb|CR388079.8| Zebrafish DNA sequence from clone DKEY-29F21 in linkage group 22,
             complete sequence
          Length = 122514

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   atataaaagtatacaaaacaaaag 271
             ||||||||||||||| ||||||||
Sbjct: 32732 atataaaagtatacacaacaaaag 32709
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>gb|AC122138.2| Homo sapiens chromosome 4 clone RP11-818C3, complete sequence
          Length = 112876

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   aacaaaccaaaacagcatat 251
             ||||||||||||||||||||
Sbjct: 85918 aacaaaccaaaacagcatat 85937
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>emb|BX323995.13| Zebrafish DNA sequence from clone RP71-86K19 in linkage group 1, complete
              sequence
          Length = 156662

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    cattaataaaatataaaaat 165
              ||||||||||||||||||||
Sbjct: 111999 cattaataaaatataaaaat 112018
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>emb|AL929400.6| Zebrafish DNA sequence from clone CH211-175M24, complete sequence
          Length = 143900

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ctgcattaataaaatataaa 162
             ||||||||||||||||||||
Sbjct: 43994 ctgcattaataaaatataaa 43975
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>gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, complete sequence
          Length = 185596

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tgcattaataaaatataaaa 163
              ||||||||||||||||||||
Sbjct: 156711 tgcattaataaaatataaaa 156692
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>gb|AC108930.3| Homo sapiens BAC clone RP11-204C12 from 4, complete sequence
          Length = 72790

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   taaaatataaaaattcagta 171
             ||||||||||||||||||||
Sbjct: 72509 taaaatataaaaattcagta 72528
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>gb|AC097533.2| Homo sapiens BAC clone RP11-770K15 from 4, complete sequence
          Length = 174696

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 152  taaaatataaaaattcagta 171
            ||||||||||||||||||||
Sbjct: 1719 taaaatataaaaattcagta 1738
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>gb|AC061975.6| Homo sapiens chromosome 17, clone CTD-2008P7, complete sequence
          Length = 142163

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 248  atataaaagtatacaaaacaaaag 271
            ||||||||||| ||||||||||||
Sbjct: 5736 atataaaagtaaacaaaacaaaag 5759
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>gb|AC018600.6| Homo sapiens, clone RP11-26L8, complete sequence
          Length = 159469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   cattaataaaatataaaaat 165
             ||||||||||||||||||||
Sbjct: 96498 cattaataaaatataaaaat 96479
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>gb|AY864330.1| Chrysodeixis chalcites nucleopolyhedrovirus, complete genome
          Length = 149622

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  taaaagtatacaaaacaaaa 270
            ||||||||||||||||||||
Sbjct: 9168 taaaagtatacaaaacaaaa 9149
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>gb|AF275938.1|AF275938 Carnobacterium piscicola putative piscicolin 126 immunity protein
            PisI (pisI), piscicolin 126 protein PisA precursor
            (pisA), piscicolin 126 induction factor PisN precursor
            (pisN), putative histidine kinase PisK (pisK), putative
            response regulator PisR (pisR), putative ABC transporter
            PisT (pisT), and putative accessory protein PisE (pisE)
            genes, complete cds
          Length = 8293

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  aaaacaaaagggcgcttctg 281
            ||||||||||||||||||||
Sbjct: 1428 aaaacaaaagggcgcttctg 1409
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 152      taaaatataaaaattcagtacgag 175
                |||||||||| |||||||||||||
Sbjct: 13822178 taaaatataacaattcagtacgag 13822155
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>gb|AC156950.4| Mus musculus 10 BAC RP24-329N2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 166942

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gcatataaaagtatacaaaa 265
             ||||||||||||||||||||
Sbjct: 97259 gcatataaaagtatacaaaa 97278
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>emb|AJ223307.1|BNAJ3307 Brassica napus gene encoding induced myrosinase-associated protein
          Length = 4581

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  attaataaaatataaaaatt 166
            ||||||||||||||||||||
Sbjct: 2714 attaataaaatataaaaatt 2695
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>emb|AL953893.17| Zebrafish DNA sequence from clone DKEY-60B12, complete sequence
          Length = 216749

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 148    ttaataaaatataaaaattcagta 171
              ||||||||||||||||||| ||||
Sbjct: 109917 ttaataaaatataaaaattgagta 109940
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>gb|AC002094.1|AC002094 Genomic sequence from Human 17, complete sequence
          Length = 167101

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 248   atataaaagtatacaaaacaaaag 271
             ||||||||||| ||||||||||||
Sbjct: 88671 atataaaagtaaacaaaacaaaag 88694
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>dbj|AP006696.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT17N21, TM0403,
             complete sequence
          Length = 97807

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   attaataaaatataaaaatt 166
             ||||||||||||||||||||
Sbjct: 68886 attaataaaatataaaaatt 68867
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>dbj|AP006639.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT25N16, TM0216,
             complete sequence
          Length = 95667

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   attaataaaatataaaaatt 166
             ||||||||||||||||||||
Sbjct: 14586 attaataaaatataaaaatt 14605



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   attaataaaatataaaaatt 166
             ||||||||||||||||||||
Sbjct: 13007 attaataaaatataaaaatt 12988
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>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008,
             complete sequence
          Length = 116223

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   attaataaaatataaaaatt 166
             ||||||||||||||||||||
Sbjct: 36779 attaataaaatataaaaatt 36798
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>emb|AL807382.8| Mouse DNA sequence from clone RP23-434B7 on chromosome 4, complete
             sequence
          Length = 190179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   aactaggtacagtagtacat 362
             ||||||||||||||||||||
Sbjct: 70193 aactaggtacagtagtacat 70212


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,961,945
Number of Sequences: 3902068
Number of extensions: 4961945
Number of successful extensions: 162588
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 162148
Number of HSP's gapped (non-prelim): 440
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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