ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl44a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468076.1| Oryza sativa (japonica cultivar-group), mRNA 129 9e-27
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 129 9e-27
3dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic D... 129 9e-27
4dbj|AK060260.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 9e-27
5dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
6dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AK073793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
8gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,... 84 5e-13
9gb|AY106598.1| Zea mays PCO069596 mRNA sequence 54 4e-04
10gb|AC150385.2| Branchiostoma floridae clone CH302-101G3, complet... 42 1.6
11gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Can... 42 1.6
12dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AK110064.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
14gb|AC155813.2| Mus musculus BAC clone RP24-167L2 from 9, complet... 42 1.6
15emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-5... 42 1.6
16emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-9... 42 1.6
17ref|XM_364545.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.4
18gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 40 6.4
19emb|AL135903.12| Human DNA sequence from clone RP11-30P6 on chro... 40 6.4
20emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, compl... 40 6.4
21emb|CR759967.5| Zebrafish DNA sequence from clone DKEY-94P13 in ... 40 6.4
22gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosom... 40 6.4
23gb|AF502150.1| Vibrio vulnificus cytochrome c-type biogenesis pr... 40 6.4
24dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 6.4
25gb|AC011357.5| Homo sapiens chromosome 5 clone CTC-362D12, compl... 40 6.4
26gb|AC011386.6| Homo sapiens chromosome 5 clone CTB-15P5, complet... 40 6.4
27gb|AC104068.3| Homo sapiens BAC clone RP11-252F15 from 4, comple... 40 6.4
28gb|AC015911.8| Homo sapiens chromosome 17, clone RP11-1094M14, c... 40 6.4
29gb|AC068576.7| Homo sapiens chromosome 17, clone RP11-727G18, co... 40 6.4
30gb|AC060766.8| Homo sapiens chromosome 17, clone RP11-686D22, co... 40 6.4
31gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete ... 40 6.4
32gb|AC157480.3| Pan troglodytes BAC clone CH251-394P5 from chromo... 40 6.4
33gb|AC046131.35|AC046131 Homo sapiens 12 BAC RP11-847A19 (Roswell... 40 6.4
34ref|NM_072466.2| Caenorhabditis elegans F10G2.1 (F10G2.1) mRNA, ... 40 6.4
35gb|AC069114.4|AC069114 Homo sapiens chromosome 18, clone RP11-73... 40 6.4
36gb|AC027458.4|AC027458 Homo sapiens chromosome 18, clone RP11-72... 40 6.4
37dbj|AK015320.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.4
38gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cance... 40 6.4
39gb|U64836.1| Caenorhabditis elegans cosmid F10G2, complete sequence 40 6.4
40gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, com... 40 6.4
41gb|AC159904.2| Pan troglodytes BAC clone CH251-488L1 from chromo... 40 6.4
42emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chr... 40 6.4
43dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 6.4
44dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.4
45gb|AC174644.2| Mus musculus BAC clone RP23-432C18 from chromosom... 40 6.4 
>ref|XM_468076.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1688

 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 250  tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
            ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 1346 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 1287

                                                                        
Query: 310  cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
            |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 1286 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 1227

                                     
Query: 370  cgtagctcggggccgtggacgactg 394
            | ||||||||  |||||||||||||
Sbjct: 1226 catagctcggaaccgtggacgactg 1202



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 448  gcacgacgtcgtgcatcgtcggccgatc 475
            ||||||| |||||||||||||| |||||
Sbjct: 1136 gcacgacctcgtgcatcgtcggtcgatc 1109
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                            
Query: 250      tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
                ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 32907891 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 32907832

                                                                            
Query: 310      cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
                |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 32907831 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 32907772

                                         
Query: 370      cgtagctcggggccgtggacgactg 394
                | ||||||||  |||||||||||||
Sbjct: 32907771 catagctcggaaccgtggacgactg 32907747



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 22       tttctgttttacaaacttcag 42
                |||||||||||||||||||||
Sbjct: 28129567 tttctgttttacaaacttcag 28129547



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 448      gcacgacgtcgtgcatcgtcggccgatc 475
                ||||||| |||||||||||||| |||||
Sbjct: 32907681 gcacgacctcgtgcatcgtcggtcgatc 32907654
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>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1534_E09
          Length = 126209

 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                         
Query: 250   tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
             ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 62632 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 62573

                                                                         
Query: 310   cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
             |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 62572 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 62513

                                      
Query: 370   cgtagctcggggccgtggacgactg 394
             | ||||||||  |||||||||||||
Sbjct: 62512 catagctcggaaccgtggacgactg 62488



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 448   gcacgacgtcgtgcatcgtcggccgatc 475
             ||||||| |||||||||||||| |||||
Sbjct: 62422 gcacgacctcgtgcatcgtcggtcgatc 62395
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>dbj|AK060260.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-H01, full
            insert sequence
          Length = 1688

 Score =  129 bits (65), Expect = 9e-27
 Identities = 125/145 (86%)
 Strand = Plus / Minus

                                                                        
Query: 250  tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
            ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| || ||||
Sbjct: 1346 tctactctgtgttctgtgatatcacctcgccgaacttcaggaagagctccgcatctgacg 1287

                                                                        
Query: 310  cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
            |||||||||| ||  ||||||| || | |||| ||||||  ||||| || |||||||| |
Sbjct: 1286 cgctcgacgaattttcacaggagagcgtgctgccgcctcgtaggctcacgtactcgttga 1227

                                     
Query: 370  cgtagctcggggccgtggacgactg 394
            | ||||||||  |||||||||||||
Sbjct: 1226 catagctcggaaccgtggacgactg 1202



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 448  gcacgacgtcgtgcatcgtcggccgatc 475
            ||||||| |||||||||||||| |||||
Sbjct: 1136 gcacgacctcgtgcatcgtcggtcgatc 1109
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                           
Query: 250     tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
               |||||||||||||||| || ||  ||||||| |||||||| || ||||| || ||||| |
Sbjct: 5255421 tctactctgtgttctgagaaatgacctcgccaaacttgagaaacagctcagcatcggaag 5255480

                                                                           
Query: 310     cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
                 | |||||||||||| ||||| ||  |||||| |||||| | ||||||||||||||| |
Sbjct: 5255481 tacacgacgagttggcgcaggagagcacgctggtgcctcttaagctgacatactcgttga 5255540

                          
Query: 370     cgtagctcggg 380
                ||||||||||
Sbjct: 5255541 tgtagctcggg 5255551
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0016O19
          Length = 169120

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                          
Query: 250    tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
              |||||||||||||||| || ||  ||||||| |||||||| || ||||| || ||||| |
Sbjct: 122143 tctactctgtgttctgagaaatgacctcgccaaacttgagaaacagctcagcatcggaag 122202

                                                                          
Query: 310    cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
                | |||||||||||| ||||| ||  |||||| |||||| | ||||||||||||||| |
Sbjct: 122203 tacacgacgagttggcgcaggagagcacgctggtgcctcttaagctgacatactcgttga 122262

                         
Query: 370    cgtagctcggg 380
               ||||||||||
Sbjct: 122263 tgtagctcggg 122273
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>dbj|AK073793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070P05, full
            insert sequence
          Length = 3673

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 250  tctactctgtgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacg 309
            |||||||||||||||| || ||  ||||||| |||||||| || ||||| || ||||| |
Sbjct: 3308 tctactctgtgttctgagaaatgacctcgccaaacttgagaaacagctcagcatcggaag 3249

                                                                        
Query: 310  cgctcgacgagttggcacaggacagggcgctggcgcctctcaggctgacatactcgttca 369
              | |||||||||||| ||||| ||  |||||| |||||| | ||||||||||||||| |
Sbjct: 3248 tacacgacgagttggcgcaggagagcacgctggtgcctcttaagctgacatactcgttga 3189

                       
Query: 370  cgtagctcggg 380
             ||||||||||
Sbjct: 3188 tgtagctcggg 3178
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>gb|AF466199.1| Sorghum bicolor putative receptor protein kinase,
            aminoalcoholphosphotransferase, putative
            growth-regulating factor 1, putative GAG-POL precursor,
            putative GAG-POL precursor, putative RIRE2 orf3, putative
            anthocyanin regulatory C1, putative protein T30F21.6,
            putative copia polyprotein, putative copia polyprotein,
            putative protein NP_196765.1, and gb protein genes,
            complete cds; and putative zinc finger protein gene,
            partial cds
          Length = 144159

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                        
Query: 259  tgttctgtgagatcgcctcgccgaacttgaggaagagctccgcgtcggacgcgctcgacg 318
            ||||||| ||||| |||||||||||||||||||| ||||| ||||| || | ||| | ||
Sbjct: 1434 tgttctgcgagatggcctcgccgaacttgaggaacagctcggcgtccgaggtgctggtcg 1493

                                                                      
Query: 319  agttggcacaggacagggcgctggcgcctctcaggctgacatactcgttcacgtagct 376
            ||||||| ||||| || |||| || ||| | ||||||||| |||||||| | ||||||
Sbjct: 1494 agttggcgcaggagagagcgccggtgccccgcaggctgacgtactcgttgatgtagct 1551
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>gb|AY106598.1| Zea mays PCO069596 mRNA sequence
          Length = 1273

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 284  cttgaggaagagctccgcgtcggacgcgctcgacgagttggcacaggacagggcgctggc 343
            ||||||||| ||||| ||||| || | ||| ||||||||||| ||||| |||||||  | 
Sbjct: 1273 cttgaggaacagctcggcgtccgaggtgctggacgagttggcgcaggagagggcgccagt 1214

                                   
Query: 344  gcctctcaggctgacatactcgt 366
            ||| | ||||||||| |||||||
Sbjct: 1213 gccccgcaggctgacgtactcgt 1191



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 441  aggacgtgcacgacgtcgtgcatcgtcggccg 472
            |||||| |||| || |||||||||||||||||
Sbjct: 1082 aggacgcgcaccacctcgtgcatcgtcggccg 1051
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>gb|AC150385.2| Branchiostoma floridae clone CH302-101G3, complete sequence
          Length = 121661

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 101   agccaagactgaagaaggcca 121
             |||||||||||||||||||||
Sbjct: 40030 agccaagactgaagaaggcca 40050
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>gb|AC091607.11| Homo sapiens 3 BAC RP11-118D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175447

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   ccccaaattcagtggcctctg 176
             |||||||||||||||||||||
Sbjct: 93878 ccccaaattcagtggcctctg 93898
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>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 22     tttctgttttacaaacttcag 42
              |||||||||||||||||||||
Sbjct: 119214 tttctgttttacaaacttcag 119194
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>dbj|AK110064.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-E01, full
            insert sequence
          Length = 2772

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 397  gcgacgccgtcttcgggggcgcttctgggcaga 429
            |||||| |||||||||||||||| | |||||||
Sbjct: 2072 gcgacggcgtcttcgggggcgctaccgggcaga 2040
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>gb|AC155813.2| Mus musculus BAC clone RP24-167L2 from 9, complete sequence
          Length = 166097

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 72     aaagggaggccgaaaaggagagaga 96
              |||||||||| ||||||||||||||
Sbjct: 149744 aaagggaggcagaaaaggagagaga 149720
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>emb|AL162171.4|CNS01RHP Human chromosome 14 DNA sequence BAC R-507K2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197550

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 114   gaaggccaaaagagaagcatattta 138
             ||||||||||| |||||||||||||
Sbjct: 24058 gaaggccaaaacagaagcatattta 24034
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>emb|AL121768.4|CNS01DSB Human chromosome 14 DNA sequence BAC R-976B16 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 213239

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 114  gaaggccaaaagagaagcatattta 138
            ||||||||||| |||||||||||||
Sbjct: 3211 gaaggccaaaacagaagcatattta 3235
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>ref|XM_364545.1| Magnaporthe grisea 70-15 hypothetical protein (MG09381.4) partial
           mRNA
          Length = 900

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 298 ccgcgtcggacgcgctcgac 317
           ||||||||||||||||||||
Sbjct: 353 ccgcgtcggacgcgctcgac 372
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>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 241    gaggtcaagtctactctgtg 260
              ||||||||||||||||||||
Sbjct: 150225 gaggtcaagtctactctgtg 150244
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>emb|AL135903.12| Human DNA sequence from clone RP11-30P6 on chromosome 6 Contains a
             karyopherin alpha 5 (importin alpha 6) (KPNA5) pseudogene,
             a keratin 18 (KRT18) pseudogene, a tumor protein,
             translationally-controlled 1 (TPT1) pseudogene, a
             pseudogene similar to dUTP pyrophosphatase (DUT), the NT5E
             gene for 5'-nucleotidase ecto (CD73) and a CpG island,
             complete sequence
          Length = 170232

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   tgaagaaggccaaaagagaa 129
             ||||||||||||||||||||
Sbjct: 59784 tgaagaaggccaaaagagaa 59803
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>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence
          Length = 198202

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gccaaaagagaagcatattt 137
              ||||||||||||||||||||
Sbjct: 191884 gccaaaagagaagcatattt 191865
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>emb|CR759967.5| Zebrafish DNA sequence from clone DKEY-94P13 in linkage group 5,
             complete sequence
          Length = 61816

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    aaaacagccaagactgaaga 115
             ||||||||||||||||||||
Sbjct: 51079 aaaacagccaagactgaaga 51098
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>gb|AC159893.2| Mus musculus BAC clone RP23-365N23 from chromosome 9, complete sequence
          Length = 196765

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     atcccagctcaagagcagtt 68
              ||||||||||||||||||||
Sbjct: 117778 atcccagctcaagagcagtt 117797
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>gb|AF502150.1| Vibrio vulnificus cytochrome c-type biogenesis protein CcmF (ccmF)
            gene, partial cds; thiol:disulfide interchange protein
            CcmG (ccmG) gene, complete cds; and cytochrome c-type
            biogenesis protein CcmH (ccmH) gene, partial cds
          Length = 3031

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 268  agatcgcctcgccgaacttgaggaagag 295
            |||||||||| | |||||||||||||||
Sbjct: 2229 agatcgcctctcagaacttgaggaagag 2256
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 268     agatcgcctcgccgaacttgaggaagag 295
               |||||||||| | |||||||||||||||
Sbjct: 2483960 agatcgcctctcagaacttgaggaagag 2483933
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>gb|AC011357.5| Homo sapiens chromosome 5 clone CTC-362D12, complete sequence
          Length = 138533

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    aagggaggccgaaaaggagagaga 96
             ||||||||| ||||||||||||||
Sbjct: 82329 aagggaggcagaaaaggagagaga 82352
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>gb|AC011386.6| Homo sapiens chromosome 5 clone CTB-15P5, complete sequence
          Length = 192530

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     aagggaggccgaaaaggagagaga 96
              ||||||||| ||||||||||||||
Sbjct: 168771 aagggaggcagaaaaggagagaga 168748
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>gb|AC104068.3| Homo sapiens BAC clone RP11-252F15 from 4, complete sequence
          Length = 137716

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gagagagaaaacagccaaga 108
             ||||||||||||||||||||
Sbjct: 13632 gagagagaaaacagccaaga 13651
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>gb|AC015911.8| Homo sapiens chromosome 17, clone RP11-1094M14, complete sequence
          Length = 181561

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gaaaaggagagagaaaacag 102
             ||||||||||||||||||||
Sbjct: 10912 gaaaaggagagagaaaacag 10893
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>gb|AC068576.7| Homo sapiens chromosome 17, clone RP11-727G18, complete sequence
          Length = 90150

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gaaaaggagagagaaaacag 102
             ||||||||||||||||||||
Sbjct: 43404 gaaaaggagagagaaaacag 43385
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>gb|AC060766.8| Homo sapiens chromosome 17, clone RP11-686D22, complete sequence
          Length = 169675

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    gaaaaggagagagaaaacag 102
             ||||||||||||||||||||
Sbjct: 14333 gaaaaggagagagaaaacag 14352
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>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome
          Length = 859006

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   ctatttttcaaaacaattag 196
             ||||||||||||||||||||
Sbjct: 23989 ctatttttcaaaacaattag 23970
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>gb|AC157480.3| Pan troglodytes BAC clone CH251-394P5 from chromosome unknown,
            complete sequence
          Length = 179883

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   gaaaaggagagagaaaacag 102
            ||||||||||||||||||||
Sbjct: 8687 gaaaaggagagagaaaacag 8668
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>gb|AC046131.35|AC046131 Homo sapiens 12 BAC RP11-847A19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 111131

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tggcctctgctatttttcaa 187
             ||||||||||||||||||||
Sbjct: 73777 tggcctctgctatttttcaa 73796
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>ref|NM_072466.2| Caenorhabditis elegans F10G2.1 (F10G2.1) mRNA, complete cds
          Length = 680

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 tttcaaaacaattagcgaaa 201
           ||||||||||||||||||||
Sbjct: 244 tttcaaaacaattagcgaaa 225
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>gb|AC069114.4|AC069114 Homo sapiens chromosome 18, clone RP11-736G13, complete sequence
          Length = 149144

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 148  gggcatctccccaaattcag 167
            ||||||||||||||||||||
Sbjct: 6802 gggcatctccccaaattcag 6821
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>gb|AC027458.4|AC027458 Homo sapiens chromosome 18, clone RP11-723G8, complete sequence
          Length = 182495

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   gggcatctccccaaattcag 167
             ||||||||||||||||||||
Sbjct: 80831 gggcatctccccaaattcag 80812
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>dbj|AK015320.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930435C18 product:unclassifiable, full
            insert sequence
          Length = 1232

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   atcccagctcaagagcagtt 68
            ||||||||||||||||||||
Sbjct: 1071 atcccagctcaagagcagtt 1052
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>gb|AC153587.2| Mus musculus 6 BAC RP23-361L1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 232002

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    cagtggcctctgctattttt 184
              ||||||||||||||||||||
Sbjct: 133780 cagtggcctctgctattttt 133799
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>gb|U64836.1| Caenorhabditis elegans cosmid F10G2, complete sequence
          Length = 26539

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tttcaaaacaattagcgaaa 201
             ||||||||||||||||||||
Sbjct: 17427 tttcaaaacaattagcgaaa 17408
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>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence
          Length = 94576

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   gccaaaagagaagcatattt 137
             ||||||||||||||||||||
Sbjct: 34813 gccaaaagagaagcatattt 34794
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>gb|AC159904.2| Pan troglodytes BAC clone CH251-488L1 from chromosome unknown, complete
             sequence
          Length = 177340

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gaaaaggagagagaaaacag 102
             ||||||||||||||||||||
Sbjct: 55776 gaaaaggagagagaaaacag 55757
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>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete
              sequence
          Length = 177152

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gccaaaagagaagcatattt 137
              ||||||||||||||||||||
Sbjct: 174097 gccaaaagagaagcatattt 174078
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>dbj|AP001524.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-702P11, complete
             sequence
          Length = 150847

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 118   gccaaaagagaagcatattt 137
             ||||||||||||||||||||
Sbjct: 32504 gccaaaagagaagcatattt 32523
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>dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-728D14, complete
              sequence
          Length = 192926

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    gccaaaagagaagcatattt 137
              ||||||||||||||||||||
Sbjct: 142989 gccaaaagagaagcatattt 143008
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>gb|AC174644.2| Mus musculus BAC clone RP23-432C18 from chromosome 9, complete sequence
          Length = 199707

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     atcccagctcaagagcagtt 68
              ||||||||||||||||||||
Sbjct: 169626 atcccagctcaagagcagtt 169645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,314,686
Number of Sequences: 3902068
Number of extensions: 4314686
Number of successful extensions: 91979
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91814
Number of HSP's gapped (non-prelim): 165
length of query: 477
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 455
effective length of database: 17,147,199,772
effective search space: 7801975896260
effective search space used: 7801975896260
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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