ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl43h05 |
|---|---|
| Clone Library Name | barley_pub |
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 37.7 bits (86), Expect = 0.011 Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 4/98 (4%) Frame = +1 Query: 121 SKRTSCSLGKKGVSRSYTHTHV--NKLHTTNTGPRSTSSGQVAAMSLALAALHWFSLAAS 294 S T+ + S S T + + L +++T S +S + + SLA +++ SLA+S Sbjct: 93 SSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASS 152 Query: 295 STTMLSMGSRSC-STGTARP-SSEGRSSLSTRAG*DGA 402 STT S+ S S ST +A P SS SSLS+ A + A Sbjct: 153 STTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSA 190 Score = 37.0 bits (84), Expect = 0.019 Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%) Frame = +1 Query: 28 TEVTT*YKRGCTALYTYVTPTRRNPIILIFTSKRTSCSLGKKGVSRSYTHTHVNKLHTTN 207 + V T KR T+ Y Y T + + S TS S ++ S + + TT+ Sbjct: 50 SSVPTLLKRATTS-YNYNTSSASS-------SSLTSSSAASSSLTSSSSLASSSTNSTTS 101 Query: 208 TGPRSTS--SGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCSTGTARPSSEGRSSLST 381 P S+S S + SLA ++ SLA+SS T S+ S S ++ + SS SSL++ Sbjct: 102 ASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLAS 161
>VWF_PIG (Q28833) Von Willebrand factor precursor (vWF) (Fragment)| Length = 2482 Score = 30.0 bits (66), Expect(2) = 0.23 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = -3 Query: 347 RAVPVEQEREPMDNMVVDEAASENQCNAASASDIAAT*PELVDRGPVLVVCNLFTCVC 174 R VP++ N V+ + ++ C + SDI +LVD P L VC TC C Sbjct: 709 RKVPLDTSPATCHNNVMKQTMVDSSCRILT-SDIFQDCNKLVDPEPYLDVCIYDTCSC 765 Score = 21.9 bits (45), Expect(2) = 0.23 Identities = 9/28 (32%), Positives = 13/28 (46%) Frame = -2 Query: 120 CEDQNDRISSCWCNIRVQGCATSFVLRC 37 CE++N R C R CA + + C Sbjct: 804 CEERNLREDGYQCEWRYNSCAPACPVTC 831
>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von| Willebrand antigen II] Length = 2813 Score = 29.6 bits (65), Expect(2) = 0.29 Identities = 17/58 (29%), Positives = 27/58 (46%) Frame = -3 Query: 347 RAVPVEQEREPMDNMVVDEAASENQCNAASASDIAAT*PELVDRGPVLVVCNLFTCVC 174 R VP++ N ++ + ++ C + SD+ +LVD P L VC TC C Sbjct: 1035 RKVPLDSSPATCHNNIMKQTMVDSSCRILT-SDVFQDCNKLVDPEPYLDVCIYDTCSC 1091 Score = 21.9 bits (45), Expect(2) = 0.29 Identities = 9/28 (32%), Positives = 14/28 (50%) Frame = -2 Query: 120 CEDQNDRISSCWCNIRVQGCATSFVLRC 37 CE++N R + C R CA + + C Sbjct: 1130 CEERNLRENGYECEWRYNSCAPACQVTC 1157
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 32.7 bits (73), Expect = 0.36 Identities = 31/122 (25%), Positives = 48/122 (39%) Frame = +1 Query: 22 PSTEVTT*YKRGCTALYTYVTPTRRNPIILIFTSKRTSCSLGKKGVSRSYTHTHVNKLHT 201 PST TT ++ T PT T+ S S + S T + + + Sbjct: 407 PSTSTTTTEVTSTSSTVTTTEPTTT------LTTSTASTSTTEPSTSTVTTSPSTSPVTS 460 Query: 202 TNTGPRSTSSGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCSTGTARPSSEGRSSLST 381 T T S+S+ S + S +STT S + S+ ++ PSS SS+S+ Sbjct: 461 TVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSS 520 Query: 382 RA 387 A Sbjct: 521 TA 522 Score = 30.0 bits (66), Expect = 2.3 Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 2/123 (1%) Frame = +1 Query: 25 STEVTT*YKRGCTALYTYVTPTRRNPIILIFTSKRTS--CSLGKKGVSRSYTHTHVNKLH 198 S+ VTT T T T + TS TS S S S T T Sbjct: 420 SSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTE 479 Query: 199 TTNTGPRSTSSGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCSTGTARPSSEGRSSLS 378 +T+T P ST + A S + S SST S+ S + ST ++ +S +SS + Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSS--TSTQQSSTT 537 Query: 379 TRA 387 T++ Sbjct: 538 TKS 540
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 32.7 bits (73), Expect = 0.36 Identities = 32/103 (31%), Positives = 48/103 (46%) Frame = +1 Query: 73 TYVTPTRRNPIILIFTSKRTSCSLGKKGVSRSYTHTHVNKLHTTNTGPRSTSSGQVAAMS 252 T ++ T +P + TS S S S T T + +T+T P STS+ Sbjct: 184 TSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSS---STSTSPSSTSTS------ 234 Query: 253 LALAALHWFSLAASSTTMLSMGSRSCSTGTARPSSEGRSSLST 381 ++L S +++ST+ S + S ST T+ PSS SS ST Sbjct: 235 ---SSLTSTSSSSTSTSQSSTSTSSSSTSTS-PSSTSTSSSST 273
>TCB1_RABIT (P06333) T-cell receptor beta chain ANA 11| Length = 319 Score = 32.3 bits (72), Expect = 0.46 Identities = 20/65 (30%), Positives = 27/65 (41%) Frame = +3 Query: 36 HNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEKGGKPIIHTHTRKQVTHH*HRP 215 H T +H+ HVC T + H +H TH L L + HTR H H+P Sbjct: 68 HTCTHTHIHASTHVCIHTHTFT-HLCIHTLTHALTL--TCAPTRTYAHTRAPTHVHPHKP 124 Query: 216 TVNKL 230 +L Sbjct: 125 RPRQL 129
>PALA_EMENI (P79020) pH-response regulator protein palA/RIM20| Length = 847 Score = 32.0 bits (71), Expect = 0.61 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = -1 Query: 424 AAPARPRPPHLNPLW*RAKSGPPTRGVPCRWSRSGSPWITWLSTRQPVRTSATLPVPVTS 245 AA + P P H NP+ + + PP++ +P + P QP+RT T P P S Sbjct: 758 AAASVPAPTHFNPV--KPQPQPPSQAIPPQSQPQPQP--------QPLRTPLTAPQPTRS 807 Query: 244 L 242 + Sbjct: 808 V 808
>MYST3_MOUSE (Q8BZ21) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)| (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3) (Monocytic leukemia zinc finger protein) (Monocytic leukemia zinc finger homolog) Length = 2003 Score = 31.6 bits (70), Expect = 0.79 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -3 Query: 422 SSGTATAAPSQPALVESEERPSDEGRAVPVE-QEREPMDNMVVDEAASENQCNAASASD 249 SS + A P +P E +E+PSD+ R E QE E + DE +E N +D Sbjct: 1253 SSNSPEAEPKEPEPEEEDEKPSDDQRQSEEEPQELEEQEQEEEDEVTTEANQNEDHDAD 1311
>CJ092_HUMAN (Q8IYW2) Protein C10orf92| Length = 876 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 6/73 (8%) Frame = -1 Query: 424 AAPARPRPPH---LNPLW*RAKSGPPTRGVPCRWSRSGSPWITWLSTRQPVRTSATLPVP 254 AAP P H L P+W A S + C S +G+P + P+ T LP P Sbjct: 728 AAPKLRAPSHHAQLGPVWAAAPSHRVVQAWTCLPSAAGAPALASALGSAPLPTHPHLPAP 787 Query: 253 VTS---LLPDLSL 224 + S LP L L Sbjct: 788 IPSSQLALPFLGL 800
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 30.0 bits (66), Expect = 2.3 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = +1 Query: 199 TTNTGPRSTSSGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCSTGTARPSSEGRSSLS 378 +TNT S++S ++ + + + S +SST+ + S S + TA +SEG SS S Sbjct: 215 STNTPTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSSTSSTQETAATTSEGSSSSS 274
>RPOB_CHAGL (Q8MA12) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1070 Score = 29.6 bits (65), Expect = 3.0 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = +1 Query: 124 KRTSCSLGKKGVSRSYTHTHVNKLHTTNTG---PRSTSSGQVAAMSLALAA 267 KR SLG G++R HV +H ++ G P TS G A + +LA+ Sbjct: 389 KRRISSLGPGGLTRRTASFHVRDIHPSHYGRICPIETSEGMNAGLVASLAS 439
>YIQ9_YEAST (P40442) Hypothetical protein YIL169C precursor| Length = 995 Score = 29.6 bits (65), Expect = 3.0 Identities = 20/63 (31%), Positives = 34/63 (53%) Frame = +1 Query: 154 GVSRSYTHTHVNKLHTTNTGPRSTSSGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCS 333 GVS S + + + ++++ P+STSS A+ S +L + +ASS + + S S S Sbjct: 244 GVSSSGSQSVSSASGSSSSFPQSTSSASTASGSATSNSLSSITSSASSASATASNSLSSS 303 Query: 334 TGT 342 GT Sbjct: 304 DGT 306
>AWH_DROME (Q8IRC7) LIM/homeobox protein Awh (Protein arrowhead)| Length = 275 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = -1 Query: 241 LPDLSLLTVGLC*WCVTCLRVCVCMIGL 158 + D L VG C W CLR C+CM L Sbjct: 15 ISDRFFLEVGGCSWHAHCLRCCMCMCPL 42
>LYOX_MOUSE (P28301) Protein-lysine 6-oxidase precursor (EC 1.4.3.13) (Lysyl| oxidase) (RAS excision protein) Length = 411 Score = 29.3 bits (64), Expect = 3.9 Identities = 20/59 (33%), Positives = 25/59 (42%) Frame = +1 Query: 199 TTNTGPRSTSSGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCSTGTARPSSEGRSSL 375 T +T R+ S VAA AA HWF S + SR + TA P S+L Sbjct: 93 TASTRARTPSPSGVAAGRPRPAARHWFQAGFSPSGARDGASRRAANRTASPQPPQLSNL 151
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 29.3 bits (64), Expect = 3.9 Identities = 26/88 (29%), Positives = 40/88 (45%) Frame = +1 Query: 118 TSKRTSCSLGKKGVSRSYTHTHVNKLHTTNTGPRSTSSGQVAAMSLALAALHWFSLAASS 297 +S T+ + +S S + + +K TT+T S SS + S ++ S + SS Sbjct: 322 SSTTTTTTTTSTTISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSST--SSSTSS 379 Query: 298 TTMLSMGSRSCSTGTARPSSEGRSSLST 381 TT S S ST + P+S S ST Sbjct: 380 TTSSSTTSSQISTTSTAPTSSTSLSSST 407
>ZAN_HUMAN (Q9Y493) Zonadhesin precursor| Length = 2812 Score = 28.9 bits (63), Expect = 5.1 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = -3 Query: 362 PSDEGRAVPVEQEREPMDNM-VVDEAASENQCNAASASDIAAT*PELVDRGPVLVVCNLF 186 P DE + +P EQ+ P N D + +C AA + + A +D P LV C Sbjct: 2111 PVDE-QQIPAEQQENPSGNCRAADLRRAREKCEAALRAPVWAQCASRIDLTPFLVDCANT 2169 Query: 185 TC 180 C Sbjct: 2170 LC 2171
>STFR_ECOLI (P76072) Side tail fiber protein homolog from lambdoid prophage Rac| Length = 1120 Score = 28.9 bits (63), Expect = 5.1 Identities = 20/71 (28%), Positives = 32/71 (45%) Frame = +1 Query: 172 THTHVNKLHTTNTGPRSTSSGQVAAMSLALAALHWFSLAASSTTMLSMGSRSCSTGTARP 351 +HTH +T+ G ++TSS S H S++ S+ + + + TA Sbjct: 974 SHTHSASASSTDLGTKTTSSFDYGTKSTNNTGAHTHSVSGSTNSAGAHTHSLANVNTASA 1033 Query: 352 SSEGRSSLSTR 384 +S G S STR Sbjct: 1034 NS-GAGSASTR 1043
>21KD_ZYMMO (P15256) 20.9 kDa protein (ORF 2)| Length = 184 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = -3 Query: 410 ATAAPSQPALVESEERPSDEGRAVPVEQEREPM------DNMVVDEAASENQ 273 AT QP + +E P EG VPV+ +R + DN++V++A E Q Sbjct: 2 ATKLRKQP--IRYDENPFIEGMVVPVKSQRVQLSRLGRDDNILVNQATGEMQ 51
>RPOB_MYCHJ (Q4A969) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1220 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +1 Query: 121 SKRTSCSLGKKGVSRSYTHTHVNKLHTTNTG---PRSTSSGQ 237 SKR SLG G++R V +HTT+ G P T GQ Sbjct: 509 SKRKVTSLGPGGLNRDTAQFEVRDVHTTHYGRICPVETPEGQ 550
>RPOB_MYCH7 (Q4A7A9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1220 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +1 Query: 121 SKRTSCSLGKKGVSRSYTHTHVNKLHTTNTG---PRSTSSGQ 237 SKR SLG G++R V +HTT+ G P T GQ Sbjct: 509 SKRKVTSLGPGGLNRDTAQFEVRDVHTTHYGRICPVETPEGQ 550
>RPOB_MYCH2 (Q5ZZS1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1220 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%) Frame = +1 Query: 121 SKRTSCSLGKKGVSRSYTHTHVNKLHTTNTG---PRSTSSGQ 237 SKR SLG G++R V +HTT+ G P T GQ Sbjct: 509 SKRKVTSLGPGGLNRDTAQFEVRDVHTTHYGRICPVETPEGQ 550
>TGM5_HUMAN (O43548) Protein-glutamine gamma-glutamyltransferase 5 (EC| 2.3.2.13) (Transglutaminase-5) (TGase 5) (Transglutaminase X) (TGase X) (TGX) (TG(X)) Length = 719 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/27 (44%), Positives = 14/27 (51%) Frame = -1 Query: 325 SGSPWITWLSTRQPVRTSATLPVPVTS 245 S SPWI WL T T +L P T+ Sbjct: 83 SPSPWIAWLETNGATSTEVSLCAPPTA 109
>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 homolog Length = 692 Score = 28.1 bits (61), Expect = 8.8 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 6/60 (10%) Frame = -1 Query: 373 AKSGPPTRGVPC--RWSRSGSP-WITWLSTRQPVRTSATLP---VPVTSLLPDLSLLTVG 212 A+SG P+RG+P + S SGSP +IT+ ++ P T + P V ++ P + +TVG Sbjct: 382 ARSGSPSRGIPTQPKASYSGSPLFITY--SQPPTTTGSPTPSSRVVMSPSNPTVFKITVG 439
>IF5A_SENVE (Q9SC12) Eukaryotic translation initiation factor 5A (eIF-5A)| Length = 159 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +3 Query: 6 QAAFHTKHGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 Q A + GGH V++ R V V + T K H H +F G+K Sbjct: 22 QQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKK 70
>IF5A1_LYCES (Q9AXQ6) Eukaryotic translation initiation factor 5A-1 (eIF-5A-1)| Length = 159 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/49 (32%), Positives = 22/49 (44%) Frame = +3 Query: 6 QAAFHTKHGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 Q A + GGH V++ R V V + T K H H +F G+K Sbjct: 22 QQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKK 70
>EGR2_HUMAN (P11161) Early growth response protein 2 (EGR-2) (Krox-20 protein)| (AT591) Length = 476 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 364 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 396
>EGR2B_BRARE (Q05159) Early growth response protein 2b (EGR-2b) (Krox-20| protein) (KRX-20 protein) Length = 412 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 323 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 355
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 28.1 bits (61), Expect = 8.8 Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 16/124 (12%) Frame = +1 Query: 4 TKLPFIPSTEVTT*YKRGCTALYTYVTPTR--------RNPIILIFTSKRTSCSLGKKGV 159 TK P ST+ T + T ++ TP+ +N ++ ++ ++ ++ K Sbjct: 279 TKSPSSESTKTTKMVEAMATEIFQPPTPSNFLSTSRFTKNSVVSTTSAIKSQSAVTKTTS 338 Query: 160 ------SRSYTHTHVNKLHTTNTG--PRSTSSGQVAAMSLALAALHWFSLAASSTTMLSM 315 S S + T K +TNTG P ST+ GQ S A + WF++ +S + Sbjct: 339 LFSTIESTSMSTTPCLKQKSTNTGALPISTA-GQEFIESTAAGTVPWFTVEKTSPASTHV 397 Query: 316 GSRS 327 G+ S Sbjct: 398 GTAS 401
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 5/89 (5%) Frame = -3 Query: 404 AAPSQPALVESEERPSDEGRAVPVEQEREPMDNMVVDEAASEN-----QCNAASASDIAA 240 ++PSQP + + P + +P EP+ ++ + + N C A +A D Sbjct: 14 SSPSQPKITHNRPIPHPQSPPLPQRPLSEPLKKQLLVDNSPGNDVVIANCVAVNAQDF-- 71 Query: 239 T*PELVDRGPVLVVCNLFTCVCVYDRLTP 153 + DR PV++ + DR+ P Sbjct: 72 --QNIPDRAPVILDGVFVYSIAKDDRVRP 98
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -1 Query: 415 ARPRPPHLNPLW*RAKSGPPTRGVPCRWSRSGSPWIT 305 A P P W R+ S PP+R P W R G W T Sbjct: 189 ASTSPRATPPTWQRSTSMPPSRASP--WPRYGRRWRT 223
>SNIP_HUMAN (Q9C0H9) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1055 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = -1 Query: 424 AAPARPRPPHLNPLW*RAKSGPPTRGVPCRWS 329 A P P PPH SGPP+RG P R S Sbjct: 355 APPGGPPPPH------SPYSGPPSRGSPVRQS 380
>EGR2_XENLA (Q08427) Early growth response protein 2 (EGR-2) (Krox-20 protein)| Length = 421 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 312 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 344
>SALL3_HUMAN (Q9BXA9) Sal-like protein 3 (Zinc finger protein SALL3) (hSALL3)| Length = 1300 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Frame = -3 Query: 404 AAPSQPALVESEERPSDEG---RAVPVEQEREPMD 309 ++PS+ A E+ E EG A PVE+E EPMD Sbjct: 101 SSPSERAESEAAEEAGAEGAEGEARPVEKEAEPMD 135
>EGR2_RAT (P51774) Early growth response protein 2 (EGR-2) (Krox-20 protein)| Length = 470 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 361 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 393
>EGR2_MOUSE (P08152) Early growth response protein 2 (EGR-2) (Krox-20 protein)| Length = 470 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 361 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 393
>DSRB_ARCFU (Q59110) Sulfite reductase, dissimilatory-type beta subunit (EC| 1.8.99.3) (Hydrogensulfite reductase beta subunit) Length = 366 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Frame = -1 Query: 274 SATLPVPVTSLLPDLSLLTVGL----C*WCVTCLRVCVCMIGLPPFSPRNSWCVLM 119 S P +L PD+ T+ + C +C C +C G+P F P N +M Sbjct: 215 STVAACPTGALKPDMKNKTIKVDVEKCMYCGNCYTMCP---GMPLFDPENDGAAIM 267
>EGR2_POERE (P26635) Early growth response protein 2 (EGR-2) (Krox-20 protein)| (Fragment) Length = 62 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 21 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 53
>EGR2_CRIGR (P26633) Early growth response protein 2 (EGR-2) (Krox-20 protein)| (Fragment) Length = 62 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +3 Query: 27 HGGHNVVQTRLHSPVHVCYTNTTKSYHFDLHIKTHQLFLGEK 152 H GH Q R +C N ++S H HI+TH GEK Sbjct: 21 HTGHKPFQCR------ICMRNFSRSDHLTTHIRTH---TGEK 53 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,894,909 Number of Sequences: 219361 Number of extensions: 1288409 Number of successful extensions: 4533 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4312 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4526 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
