ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 1e-83
2dbj|AK104084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 1e-83
3dbj|AK073724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 1e-83
4dbj|D12633.1|RIC40SSRPD Oryza sativa (japonica cultivar-group) m... 317 1e-83
5ref|XM_469197.1| Oryza sativa (japonica cultivar-group), mRNA 293 2e-76
6emb|X98656.1|ZMRPS21 Z.mays mRNA for 40S subunit ribosomal prote... 270 3e-69
7gb|BT018070.1| Zea mays clone EL01N0551D07.c mRNA sequence 260 3e-66
8emb|Y09636.1|ZM40SS21 Z.mays mRNA for 40S ribosomal subunit prot... 252 7e-64
9gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genom... 176 4e-41
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 176 4e-41
11gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genom... 176 4e-41
12dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
13gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome... 172 5e-40
14gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare str... 172 5e-40
15dbj|D10969.1|RICT62YS Oryza sativa mRNA for ribosomal protein YS25 111 2e-21
16ref|XM_380974.1| Gibberella zeae PH-1 chromosome 1 RS21_NEUCR 40... 68 2e-08
17ref|XM_744399.1| Aspergillus fumigatus Af293 ribosomal protein S... 64 4e-07
18emb|AJ011718.1|CPA011718 Cyanophora paradoxa mRNA for 40S riboso... 62 1e-06
19ref|NM_001005126.1| Xenopus tropicalis ribosomal protein S21 (MG... 58 2e-05
20gb|BC077662.1| Xenopus tropicalis ribosomal protein S21, mRNA (c... 58 2e-05
21emb|CR848394.2| Xenopus tropicalis finished cDNA, clone TNeu092k20 58 2e-05
22ref|XM_656335.1| Aspergillus nidulans FGSC A4 hypothetical prote... 56 9e-05
23dbj|AK108149.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
24ref|NM_115249.2| Arabidopsis thaliana structural constituent of ... 54 3e-04
25gb|AY081547.1| Arabidopsis thaliana 40S ribosomal protein S21 ho... 54 3e-04
26gb|AY065200.1| Arabidopsis thaliana 40S ribosomal protein S21 ho... 54 3e-04
27emb|BX826232.1|CNS0A7PX Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
28emb|BX822239.1|CNS0A777 Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
29emb|BX825864.1|CNS0A69Y Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
30emb|BX842173.1|CNS09YDX Arabidopsis thaliana Full-length cDNA Co... 54 3e-04
31gb|AY086689.1| Arabidopsis thaliana clone 26837 mRNA, complete s... 54 3e-04
32ref|XM_451253.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A05700g ... 52 0.001
33emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 52 0.001
34ref|NM_201191.1| Danio rerio ribosomal protein S21 (rps21), mRNA 52 0.001
35gb|BC071475.1| Danio rerio ribosomal protein S21, mRNA (cDNA clo... 52 0.001
36gb|BC049056.1| Danio rerio ribosomal protein S21, mRNA (cDNA clo... 52 0.001
37ref|NM_122652.2| Arabidopsis thaliana structural constituent of ... 50 0.005
38gb|AY080873.1| Arabidopsis thaliana At5g27700 mRNA sequence 50 0.005
39emb|BX831050.1|CNS0A0SD Arabidopsis thaliana Full-length cDNA Co... 50 0.005
40gb|AY089203.1| Arabidopsis thaliana clone 93174 mRNA, complete s... 50 0.005
41gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana... 50 0.005
42gb|BC077773.1| Xenopus laevis ribosomal protein S21, mRNA (cDNA ... 48 0.022
43gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 48 0.022
44ref|NM_209010.1| Eremothecium gossypii ACR255Cp (ACR255C), mRNA 48 0.022
45dbj|AP004498.1| Lotus japonicus genomic DNA, chromosome 4, clone... 48 0.022
46ref|XM_628993.1| Dictyostelium discoideum 40S ribosomal protein ... 46 0.085
47emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BA... 46 0.085
48gb|AF402830.1| Ictalurus punctatus 40S ribosomal protein S21 mRN... 46 0.085
49emb|BX822942.1|CNS0A7TM Arabidopsis thaliana Full-length cDNA Co... 46 0.085
50emb|BX832972.1|CNS0A23G Arabidopsis thaliana Full-length cDNA Co... 46 0.085
51emb|BX842222.1|CNS09YDV Arabidopsis thaliana Full-length cDNA Co... 46 0.085
52gb|AC107819.8| Mus musculus chromosome 9, clone RP23-158E1, comp... 44 0.34
53dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.34
54gb|AY440700.1| Armigeres subalbatus ASAP ID: 39387 cytosolic sma... 42 1.3
55gb|AY617524.1| Sterkiella histriomuscorum clone UGC1O0002_P16_R ... 42 1.3
56gb|AY433229.1| Aedes aegypti ASAP ID: 34237 cytosolic small ribo... 42 1.3
57gb|DQ440269.1| Aedes aegypti clone AET-342 40S ribosomal protein... 42 1.3
58gb|AC124449.3| Mus musculus BAC clone RP24-212N10 from chromosom... 42 1.3
59ref|XM_753668.1| Ustilago maydis 521 hypothetical protein (UM026... 42 1.3
60ref|XM_846040.1| PREDICTED: Canis familiaris similar to reverse ... 42 1.3
61emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 42 1.3
62gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, co... 42 1.3
63emb|AL115904.1|CNS01CRS Botrytis cinerea strain T4 cDNA library 42 1.3
64emb|AL113374.1|CNS01ATI Botrytis cinerea strain T4 cDNA library 42 1.3
65emb|AL112415.1|CNS01A2V Botrytis cinerea strain T4 cDNA library 42 1.3
66emb|AL111395.1|CNS019AJ Botrytis cinerea strain T4 cDNA library 42 1.3
67emb|BX842195.1|CNS09YE4 Arabidopsis thaliana Full-length cDNA Co... 42 1.3
68gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome... 40 5.3
69gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosom... 40 5.3
70gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.3
71gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, com... 40 5.3
72emb|AL034426.5|HS580G13 Human DNA sequence from clone RP4-580G13... 40 5.3
73emb|BX058617.1|CNS09HE5 Single read from an extremity of a full-... 40 5.3
74emb|BX041174.1|CNS093XM Single read from an extremity of a full-... 40 5.3
75emb|BX041173.1|CNS093XL Single read from an extremity of a full-... 40 5.3
76emb|BX035975.1|CNS08ZX7 Single read from an extremity of a full-... 40 5.3
77emb|BX035570.1|CNS08ZLY Single read from an extremity of a full-... 40 5.3
78emb|BX035569.1|CNS08ZLX Single read from an extremity of a full-... 40 5.3
79emb|BX033338.1|CNS08XVY Single read from an extremity of a full-... 40 5.3
80emb|BX023552.1|CNS08QC4 Single read from an extremity of a full-... 40 5.3
81emb|BX017491.1|CNS08LNR Single read from an extremity of a full-... 40 5.3
82emb|BX016580.1|CNS08KYG Single read from an extremity of a full-... 40 5.3
83emb|BX006574.1|CNS08D8I Single read from an extremity of a full-... 40 5.3
84gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cance... 40 5.3
85gb|AC010856.12| Homo sapiens chromosome 8, clone RP11-138J2, com... 40 5.3
86gb|AD000864.1|CH19R28051 Homo sapiens DNA from chromosome 19-cos... 40 5.3
87gb|AC124649.6| Homo sapiens chromosome 8, clone RP11-23I8, compl... 40 5.3
88gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complet... 40 5.3
89gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, comple... 40 5.3
90gb|AC002133.1|AC002133 Human DNA from chromosome 19 cosmid R3350... 40 5.3
91dbj|AP006139.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.3
92dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 5.3 
>dbj|AK119262.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H10, full
           insert sequence
          Length = 503

 Score =  317 bits (160), Expect = 1e-83
 Identities = 250/280 (89%)
 Strand = Plus / Minus

                                                                       
Query: 89  ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
           ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 375 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 316

                                                                       
Query: 149 acagcctgtccagggagccatcagcatcaccctgagcacggacgaacccagagagagcaa 208
           ||||||| ||||| |  |  |||||||| ||||||||||||| |||||||||||||||||
Sbjct: 315 acagcctatccagagcactgtcagcatctccctgagcacggatgaacccagagagagcaa 256

                                                                       
Query: 209 aggtggtgaagcggccatcatagaggccattctcatcaacgtgaccaatgttgatctgga 268
           ||||||||||||||||||| || || ||||||||||| || || ||||||||||||||||
Sbjct: 255 aggtggtgaagcggccatcgtacagcccattctcatccacatgcccaatgttgatctgga 196

                                                                       
Query: 269 cagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgt 328
           | ||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 195 ccgaggcgtggtccttggcggtgatgatcctgttcgtggccgagcacttcctggggacgt 136

                                                   
Query: 329 agaggtccaccatggctccctcctcattctgcatggtggc 368
           |||||||||||||    |||||||| ||||||||||||||
Sbjct: 135 agaggtccaccatctgaccctcctcgttctgcatggtggc 96
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>dbj|AK104084.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-E05, full
           insert sequence
          Length = 496

 Score =  317 bits (160), Expect = 1e-83
 Identities = 250/280 (89%)
 Strand = Plus / Minus

                                                                       
Query: 89  ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
           ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 368 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 309

                                                                       
Query: 149 acagcctgtccagggagccatcagcatcaccctgagcacggacgaacccagagagagcaa 208
           ||||||| ||||| |  |  |||||||| ||||||||||||| |||||||||||||||||
Sbjct: 308 acagcctatccagagcactgtcagcatctccctgagcacggatgaacccagagagagcaa 249

                                                                       
Query: 209 aggtggtgaagcggccatcatagaggccattctcatcaacgtgaccaatgttgatctgga 268
           ||||||||||||||||||| || || ||||||||||| || || ||||||||||||||||
Sbjct: 248 aggtggtgaagcggccatcgtacagcccattctcatccacatgcccaatgttgatctgga 189

                                                                       
Query: 269 cagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgt 328
           | ||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 188 ccgaggcgtggtccttggcggtgatgatcctgttcgtggccgagcacttcctggggacgt 129

                                                   
Query: 329 agaggtccaccatggctccctcctcattctgcatggtggc 368
           |||||||||||||    |||||||| ||||||||||||||
Sbjct: 128 agaggtccaccatctgaccctcctcgttctgcatggtggc 89
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>dbj|AK073724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063G24, full
           insert sequence
          Length = 524

 Score =  317 bits (160), Expect = 1e-83
 Identities = 250/280 (89%)
 Strand = Plus / Minus

                                                                       
Query: 89  ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
           ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 379 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 320

                                                                       
Query: 149 acagcctgtccagggagccatcagcatcaccctgagcacggacgaacccagagagagcaa 208
           ||||||| ||||| |  |  |||||||| ||||||||||||| |||||||||||||||||
Sbjct: 319 acagcctatccagagcactgtcagcatctccctgagcacggatgaacccagagagagcaa 260

                                                                       
Query: 209 aggtggtgaagcggccatcatagaggccattctcatcaacgtgaccaatgttgatctgga 268
           ||||||||||||||||||| || || ||||||||||| || || ||||||||||||||||
Sbjct: 259 aggtggtgaagcggccatcgtacagcccattctcatccacatgcccaatgttgatctgga 200

                                                                       
Query: 269 cagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgt 328
           | ||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 199 ccgaggcgtggtccttggcggtgatgatcctgttcgtggccgagcacttcctggggacgt 140

                                                   
Query: 329 agaggtccaccatggctccctcctcattctgcatggtggc 368
           |||||||||||||    |||||||| ||||||||||||||
Sbjct: 139 agaggtccaccatctgaccctcctcgttctgcatggtggc 100
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>dbj|D12633.1|RIC40SSRPD Oryza sativa (japonica cultivar-group) mRNA for 40S subunit
           ribosomal protein, complete cds
          Length = 470

 Score =  317 bits (160), Expect = 1e-83
 Identities = 250/280 (89%)
 Strand = Plus / Minus

                                                                       
Query: 89  ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
           ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 339 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 280

                                                                       
Query: 149 acagcctgtccagggagccatcagcatcaccctgagcacggacgaacccagagagagcaa 208
           ||||||| ||||| |  |  |||||||| ||||||||||||| |||||||||||||||||
Sbjct: 279 acagcctatccagagcactgtcagcatctccctgagcacggatgaacccagagagagcaa 220

                                                                       
Query: 209 aggtggtgaagcggccatcatagaggccattctcatcaacgtgaccaatgttgatctgga 268
           ||||||||||||||||||| || || ||||||||||| || || ||||||||||||||||
Sbjct: 219 aggtggtgaagcggccatcgtacagcccattctcatccacatgcccaatgttgatctgga 160

                                                                       
Query: 269 cagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgt 328
           | ||||| ||||||||||| |||||||||||||| ||||| |||||||||||||||||||
Sbjct: 159 ccgaggcgtggtccttggcggtgatgatcctgttcgtggccgagcacttcctggggacgt 100

                                                   
Query: 329 agaggtccaccatggctccctcctcattctgcatggtggc 368
           |||||||||||||    |||||||| ||||||||||||||
Sbjct: 99  agaggtccaccatctgaccctcctcgttctgcatggtggc 60
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>ref|XM_469197.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 455

 Score =  293 bits (148), Expect = 2e-76
 Identities = 241/272 (88%)
 Strand = Plus / Minus

                                                                       
Query: 92  caggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgccaca 151
           |||||||||||| ||||||||| ||  |||||||||||||||||||| ||||||||||||
Sbjct: 379 caggtaaaactagtagcaacatctactgctgcttgacctcagccttcctcttctgccaca 320

                                                                       
Query: 152 gcctgtccagggagccatcagcatcaccctgagcacggacgaacccagagagagcaaagg 211
           |||| ||||| |  |  || || || ||||||||||||| |||||||||||||||||| |
Sbjct: 319 gcctatccagagcactgtcggcgtctccctgagcacggatgaacccagagagagcaaacg 260

                                                                       
Query: 212 tggtgaagcggccatcatagaggccattctcatcaacgtgaccaatgttgatctggacag 271
           |||||||||||||||| || || ||||||||||| || || ||||||||||||||||| |
Sbjct: 259 tggtgaagcggccatcgtacagcccattctcatccacatgcccaatgttgatctggaccg 200

                                                                       
Query: 272 aggcatggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgtaga 331
           |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 199 aggcatggtccttggcggtgatgatcctgttggtggtcgagcacttcctggggacgtaga 140

                                           
Query: 332 ggtccaccatggctccctcctcattctgcatg 363
           ||||||||||    |||||||| |||||||||
Sbjct: 139 ggtccaccatctgaccctcctcgttctgcatg 108
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>emb|X98656.1|ZMRPS21 Z.mays mRNA for 40S subunit ribosomal protein S21
          Length = 409

 Score =  270 bits (136), Expect = 3e-69
 Identities = 199/220 (90%)
 Strand = Plus / Minus

                                                                       
Query: 120 ctgcttgacctcagccttcttcttctgccacagcctgtccagggagccatcagcatcacc 179
           |||||||| ||||||||||||||||||||||||||||||||  || |  |||||||||||
Sbjct: 340 ctgcttgatctcagccttcttcttctgccacagcctgtccaacgaactgtcagcatcacc 281

                                                                       
Query: 180 ctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccatt 239
           |||||||||||| ||||||||||||||||| ||||||||| | ||||| || ||||||||
Sbjct: 280 ctgagcacggacaaacccagagagagcaaacgtggtgaagtgaccatcgtacaggccatt 221

                                                                       
Query: 240 ctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcct 299
           | |||| | ||| |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 220 cgcatccaagtggccaatgttgatctggacagaggcatgatccttggcagtgatgatcct 161

                                                   
Query: 300 gttggtggcggagcacttcctggggacgtagaggtccacc 339
            || ||||| ||||||||||||||||||||||||||||||
Sbjct: 160 attcgtggccgagcacttcctggggacgtagaggtccacc 121
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>gb|BT018070.1| Zea mays clone EL01N0551D07.c mRNA sequence
          Length = 483

 Score =  260 bits (131), Expect = 3e-66
 Identities = 197/219 (89%)
 Strand = Plus / Minus

                                                                       
Query: 120 ctgcttgacctcagccttcttcttctgccacagcctgtccagggagccatcagcatcacc 179
           ||||||||  |||||||||||||| |||||||||||||||| |||||  || || |||||
Sbjct: 331 ctgcttgatatcagccttcttcttttgccacagcctgtccaaggagctgtctgcgtcacc 272

                                                                       
Query: 180 ctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccatt 239
           |||||||||||| ||||||||||||||||| || |||||| | |||||||| ||||||||
Sbjct: 271 ctgagcacggacaaacccagagagagcaaacgttgtgaagtgaccatcatacaggccatt 212

                                                                       
Query: 240 ctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcct 299
           | |||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 211 cgcatccaagtggccaatgttgatctggacagaggcatggtccttggcagtgatgatcct 152

                                                  
Query: 300 gttggtggcggagcacttcctggggacgtagaggtccac 338
           ||| ||||| ||||||||||||||||| |||||||||||
Sbjct: 151 gtttgtggccgagcacttcctggggacatagaggtccac 113
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>emb|Y09636.1|ZM40SS21 Z.mays mRNA for 40S ribosomal subunit protein S21
          Length = 523

 Score =  252 bits (127), Expect = 7e-64
 Identities = 196/219 (89%)
 Strand = Plus / Minus

                                                                       
Query: 120 ctgcttgacctcagccttcttcttctgccacagcctgtccagggagccatcagcatcacc 179
           ||||||||  ||||||||||||||||||| ||||||||||| |||||  || ||||| ||
Sbjct: 329 ctgcttgatatcagccttcttcttctgccgcagcctgtccaaggagctgtctgcatcgcc 270

                                                                       
Query: 180 ctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccatt 239
           |||||||||||| ||||||||||||||||| || |||||| | |||||||| ||||||||
Sbjct: 269 ctgagcacggacaaacccagagagagcaaatgttgtgaagtgaccatcatacaggccatt 210

                                                                       
Query: 240 ctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcct 299
           | |||| | ||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 209 cgcatccaagtggccaatgttgatctggacagaggcatggtccttggcagtgatgatcct 150

                                                  
Query: 300 gttggtggcggagcacttcctggggacgtagaggtccac 338
           ||| ||||| |||||||||||||| || |||||||||||
Sbjct: 149 gtttgtggccgagcacttcctgggaacatagaggtccac 111
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>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete
             sequence
          Length = 125380

 Score =  176 bits (89), Expect = 4e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                         
Query: 179   cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
             |||||||||||| |||||||||||||||||| ||||||||||||||||| || || ||||
Sbjct: 84986 cctgagcacggatgaacccagagagagcaaacgtggtgaagcggccatcgtacagcccat 84927

                                                                         
Query: 239   tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
             ||||||| || || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 84926 tctcatccacatgcccaatgttgatctggaccgaggcatggtccttggcggtgatgatcc 84867

                      
Query: 299   tgttggtgg 307
             |||||||||
Sbjct: 84866 tgttggtgg 84858



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                         
Query: 92    caggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgccaca 151
             |||||||||||| ||||||||| ||  |||||||||||||||||||| ||||||||||||
Sbjct: 85693 caggtaaaactagtagcaacatctactgctgcttgacctcagccttcctcttctgccaca 85634

                       
Query: 152   gcctgtccag 161
             |||| |||||
Sbjct: 85633 gcctatccag 85624



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                
Query: 313   cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatg 363
             |||||||||||||||||||||||||||||    |||||||| |||||||||
Sbjct: 84762 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatg 84712
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  176 bits (89), Expect = 4e-41
 Identities = 119/129 (92%)
 Strand = Plus / Plus

                                                                            
Query: 179      cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
                |||||||||||| |||||||||||||||||| ||||||||||||||||| || || ||||
Sbjct: 26018100 cctgagcacggatgaacccagagagagcaaacgtggtgaagcggccatcgtacagcccat 26018159

                                                                            
Query: 239      tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
                ||||||| || || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 26018160 tctcatccacatgcccaatgttgatctggaccgaggcatggtccttggcggtgatgatcc 26018219

                         
Query: 299      tgttggtgg 307
                |||||||||
Sbjct: 26018220 tgttggtgg 26018228



 Score =  172 bits (87), Expect = 5e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                            
Query: 179      cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
                |||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 12844766 cctgagcacggatgaacccagagagagcaaaggtggtgaagcggccatcgtacagcccat 12844707

                                                                            
Query: 239      tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
                ||||||| || || ||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 12844706 tctcatccacatgcccaatgttgatctggaccgaggcgtggtccttggcggtgatgatcc 12844647

                               
Query: 299      tgttggtggcggagc 313
                |||| ||||| ||||
Sbjct: 12844646 tgttcgtggccgagc 12844632



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 92       caggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgccaca 151
                |||||||||||| ||||||||| ||  |||||||||||||||||||| ||||||||||||
Sbjct: 26017393 caggtaaaactagtagcaacatctactgctgcttgacctcagccttcctcttctgccaca 26017452

                          
Query: 152      gcctgtccag 161
                |||| |||||
Sbjct: 26017453 gcctatccag 26017462



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                            
Query: 89       ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
                ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 12845453 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 12845394

                             
Query: 149      acagcctgtccag 161
                ||||||| |||||
Sbjct: 12845393 acagcctatccag 12845381



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 313      cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatggtggc 368
                |||||||||||||||||||||||||||||    |||||||| ||||||||||||||
Sbjct: 12844543 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatggtggc 12844488



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 313      cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatg 363
                |||||||||||||||||||||||||||||    |||||||| |||||||||
Sbjct: 26018324 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatg 26018374
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>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete
              sequence
          Length = 139187

 Score =  176 bits (89), Expect = 4e-41
 Identities = 119/129 (92%)
 Strand = Plus / Minus

                                                                          
Query: 179    cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
              |||||||||||| |||||||||||||||||| ||||||||||||||||| || || ||||
Sbjct: 138404 cctgagcacggatgaacccagagagagcaaacgtggtgaagcggccatcgtacagcccat 138345

                                                                          
Query: 239    tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
              ||||||| || || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 138344 tctcatccacatgcccaatgttgatctggaccgaggcatggtccttggcggtgatgatcc 138285

                       
Query: 299    tgttggtgg 307
              |||||||||
Sbjct: 138284 tgttggtgg 138276



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                          
Query: 92     caggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgccaca 151
              |||||||||||| ||||||||| ||  |||||||||||||||||||| ||||||||||||
Sbjct: 139111 caggtaaaactagtagcaacatctactgctgcttgacctcagccttcctcttctgccaca 139052

                        
Query: 152    gcctgtccag 161
              |||| |||||
Sbjct: 139051 gcctatccag 139042



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                                 
Query: 313    cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatg 363
              |||||||||||||||||||||||||||||    |||||||| |||||||||
Sbjct: 138180 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatg 138130
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  176 bits (89), Expect = 4e-41
 Identities = 119/129 (92%)
 Strand = Plus / Plus

                                                                            
Query: 179      cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
                |||||||||||| |||||||||||||||||| ||||||||||||||||| || || ||||
Sbjct: 26109409 cctgagcacggatgaacccagagagagcaaacgtggtgaagcggccatcgtacagcccat 26109468

                                                                            
Query: 239      tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
                ||||||| || || ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 26109469 tctcatccacatgcccaatgttgatctggaccgaggcatggtccttggcggtgatgatcc 26109528

                         
Query: 299      tgttggtgg 307
                |||||||||
Sbjct: 26109529 tgttggtgg 26109537



 Score =  172 bits (87), Expect = 5e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                            
Query: 179      cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
                |||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 12841529 cctgagcacggatgaacccagagagagcaaaggtggtgaagcggccatcgtacagcccat 12841470

                                                                            
Query: 239      tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
                ||||||| || || ||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 12841469 tctcatccacatgcccaatgttgatctggaccgaggcgtggtccttggcggtgatgatcc 12841410

                               
Query: 299      tgttggtggcggagc 313
                |||| ||||| ||||
Sbjct: 12841409 tgttcgtggccgagc 12841395



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 92       caggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgccaca 151
                |||||||||||| ||||||||| ||  |||||||||||||||||||| ||||||||||||
Sbjct: 26108702 caggtaaaactagtagcaacatctactgctgcttgacctcagccttcctcttctgccaca 26108761

                          
Query: 152      gcctgtccag 161
                |||| |||||
Sbjct: 26108762 gcctatccag 26108771



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                            
Query: 89       ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
                ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 12842216 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 12842157

                             
Query: 149      acagcctgtccag 161
                ||||||| |||||
Sbjct: 12842156 acagcctatccag 12842144



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                        
Query: 313      cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatggtggc 368
                |||||||||||||||||||||||||||||    |||||||| ||||||||||||||
Sbjct: 12841306 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatggtggc 12841251



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                   
Query: 313      cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatg 363
                |||||||||||||||||||||||||||||    |||||||| |||||||||
Sbjct: 26109633 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatg 26109683
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>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
             complete sequence
          Length = 132243

 Score =  172 bits (87), Expect = 5e-40
 Identities = 123/135 (91%)
 Strand = Plus / Minus

                                                                         
Query: 179   cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
             |||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 82982 cctgagcacggatgaacccagagagagcaaaggtggtgaagcggccatcgtacagcccat 82923

                                                                         
Query: 239   tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
             ||||||| || || ||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 82922 tctcatccacatgcccaatgttgatctggaccgaggcgtggtccttggcggtgatgatcc 82863

                            
Query: 299   tgttggtggcggagc 313
             |||| ||||| ||||
Sbjct: 82862 tgttcgtggccgagc 82848



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Minus

                                                                         
Query: 89    ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
             ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 83669 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 83610

                          
Query: 149   acagcctgtccag 161
             ||||||| |||||
Sbjct: 83609 acagcctatccag 83597



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                     
Query: 313   cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatggtggc 368
             |||||||||||||||||||||||||||||    |||||||| ||||||||||||||
Sbjct: 82759 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatggtggc 82704
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>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0094H06, from chromosome 3, complete sequence
          Length = 118075

 Score =  172 bits (87), Expect = 5e-40
 Identities = 123/135 (91%)
 Strand = Plus / Plus

                                                                         
Query: 179   cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
             |||||||||||| |||||||||||||||||||||||||||||||||||| || || ||||
Sbjct: 94743 cctgagcacggatgaacccagagagagcaaaggtggtgaagcggccatcgtacagcccat 94802

                                                                         
Query: 239   tctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcc 298
             ||||||| || || ||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 94803 tctcatccacatgcccaatgttgatctggaccgaggcgtggtccttggcggtgatgatcc 94862

                            
Query: 299   tgttggtggcggagc 313
             |||| ||||| ||||
Sbjct: 94863 tgttcgtggccgagc 94877



 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 89    ttccaggtaaaactactagcaacatttagagctgcttgacctcagccttcttcttctgcc 148
             ||||||||||||||| |||||| || ||  |||||||||||||||||||| |||||||||
Sbjct: 94056 ttccaggtaaaactagtagcaagatctactgctgcttgacctcagccttcctcttctgcc 94115

                          
Query: 149   acagcctgtccag 161
             ||||||| |||||
Sbjct: 94116 acagcctatccag 94128



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 313   cacttcctggggacgtagaggtccaccatggctccctcctcattctgcatggtggc 368
             |||||||||||||||||||||||||||||    |||||||| ||||||||||||||
Sbjct: 94966 cacttcctggggacgtagaggtccaccatctgaccctcctcgttctgcatggtggc 95021
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>dbj|D10969.1|RICT62YS Oryza sativa mRNA for ribosomal protein YS25
          Length = 203

 Score =  111 bits (56), Expect = 2e-21
 Identities = 113/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 235 ccattctcatcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatg 294
           ||||||||||| || || ||||||||||||||||| ||||  ||||||||||| ||||||
Sbjct: 193 ccattctcatccacatgcccaatgttgatctggaccgaggngtggtccttggcggtgatg 134

                                                                       
Query: 295 atcctgttggtggcggagcacttcctggggacgtagaggtccaccatggctccctcctca 354
           |||||||| || ||  |  |||||||| | |||||||||||||||||    |||||||| 
Sbjct: 133 atcctgttngttgcctatnacttcctgtgtacgtagaggtccaccatctgaccctcctcg 74

                        
Query: 355 ttctgcatggtgg 367
           |||||||||||||
Sbjct: 73  ttctgcatggtgg 61
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>ref|XM_380974.1| Gibberella zeae PH-1 chromosome 1 RS21_NEUCR 40S ribosomal protein
           S21 (CRP7) (FG00798.1) partial mRNA
          Length = 264

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 67/78 (85%)
 Strand = Plus / Minus

                                                                       
Query: 261 gatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcct 320
           ||||||||||||| | || ||||||||| ||||||| | ||||||||||  |||||| | 
Sbjct: 102 gatctggacagagccgtgatccttggccttgatgatgcggttggtggcgctgcacttgcg 43

                             
Query: 321 ggggacgtagaggtccac 338
           ||||||||| ||||||||
Sbjct: 42  ggggacgtaaaggtccac 25
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>ref|XM_744399.1| Aspergillus fumigatus Af293 ribosomal protein S21e (Afu2g03590)
           partial mRNA
          Length = 267

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                       
Query: 261 gatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcct 320
           ||||||||| ||||| ||||| |||||| ||||||| | ||||||||||  |||||| | 
Sbjct: 102 gatctggacggaggcgtggtcgttggccttgatgatgcggttggtggcgctgcacttgcg 43

                       
Query: 321 ggggacgtagag 332
           ||||||||||||
Sbjct: 42  ggggacgtagag 31
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>emb|AJ011718.1|CPA011718 Cyanophora paradoxa mRNA for 40S ribosomal protein S21
          Length = 332

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 79/95 (83%)
 Strand = Plus / Minus

                                                                       
Query: 244 tcaacgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcctgttg 303
           |||||||| || | |||||||||||| | ||| |||||| |||||| ||| | || ||||
Sbjct: 119 tcaacgtggccgacgttgatctggacggcggcgtggtccgtggccgagatcagccggttg 60

                                              
Query: 304 gtggcggagcacttcctggggacgtagaggtccac 338
           || |||||||||||||  |||| ||| ||||||||
Sbjct: 59  gtcgcggagcacttccgcgggatgtacaggtccac 25
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>ref|NM_001005126.1| Xenopus tropicalis ribosomal protein S21 (MGC89730), mRNA
          Length = 393

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 254 caatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagc 313
           ||||||| |||||||  ||||||||||||||||||   ||||| |||||| | || ||||
Sbjct: 173 caatgttaatctggatggaggcatggtccttggccccaatgattctgttgctcgctgagc 114

                                    
Query: 314 acttcctggggacgtagaggtccac 338
           | || | |||||||||||| |||||
Sbjct: 113 atttacgggggacgtagagatccac 89
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>gb|BC077662.1| Xenopus tropicalis ribosomal protein S21, mRNA (cDNA clone
           MGC:89730 IMAGE:7027047), complete cds
          Length = 393

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 254 caatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagc 313
           ||||||| |||||||  ||||||||||||||||||   ||||| |||||| | || ||||
Sbjct: 173 caatgttaatctggatggaggcatggtccttggccccaatgattctgttgctcgctgagc 114

                                    
Query: 314 acttcctggggacgtagaggtccac 338
           | || | |||||||||||| |||||
Sbjct: 113 atttacgggggacgtagagatccac 89
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>emb|CR848394.2| Xenopus tropicalis finished cDNA, clone TNeu092k20
          Length = 375

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Minus

                                                                       
Query: 254 caatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagc 313
           ||||||| |||||||  ||||||||||||||||||   ||||| |||||| | || ||||
Sbjct: 138 caatgttaatctggatggaggcatggtccttggccccaatgattctgttgctcgctgagc 79

                                    
Query: 314 acttcctggggacgtagaggtccac 338
           | || | |||||||||||| |||||
Sbjct: 78  atttacgggggacgtagagatccac 54
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>ref|XM_656335.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3823.2), mRNA
          Length = 267

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 261 gatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcct 320
           ||||||||| ||||| ||||| |||||| | ||||| | ||||||||||  |||||| | 
Sbjct: 102 gatctggaccgaggcgtggtcgttggccttaatgatgcggttggtggcgctgcacttgcg 43

                       
Query: 321 ggggacgtagag 332
           ||||||||||||
Sbjct: 42  ggggacgtagag 31
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>dbj|AK108149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-F08, full
           insert sequence
          Length = 534

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 260 tgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcc 319
           |||||||||| ||| | |||||||||||| ||||||| | |||||| |||  |||||| |
Sbjct: 166 tgatctggacggagccgtggtccttggccttgatgatgcggttggtcgcgctgcacttgc 107

                           
Query: 320 tggggacgtagaggtc 335
            ||||||||| |||||
Sbjct: 106 gggggacgtacaggtc 91
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>ref|NM_115249.2| Arabidopsis thaliana structural constituent of ribosome AT3G53890
           mRNA, complete cds
          Length = 572

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 314 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 255

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 254 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 195

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 194 caatgtt 188
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>gb|AY081547.1| Arabidopsis thaliana 40S ribosomal protein S21 homolog (F5K20.19)
           mRNA, complete cds
          Length = 413

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 229 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 170

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 169 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 110

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 109 caatgtt 103
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>gb|AY065200.1| Arabidopsis thaliana 40S ribosomal protein S21 homolog (F5K20.19)
           mRNA, complete cds
          Length = 497

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 312 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 253

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 252 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 193

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 192 caatgtt 186
to top
>emb|BX826232.1|CNS0A7PX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL92ZG12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 509

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 294 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 235

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 234 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 175

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 174 caatgtt 168
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>emb|BX822239.1|CNS0A777 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB22ZA10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 485

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 301 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 242

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 241 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 182

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 181 caatgtt 175
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>emb|BX825864.1|CNS0A69Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZC11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 500

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 297 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 238

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 237 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 178

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 177 caatgtt 171
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>emb|BX842173.1|CNS09YDX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL16ZD05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 508

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 297 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 238

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 237 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 178

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 177 caatgtt 171
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>gb|AY086689.1| Arabidopsis thaliana clone 26837 mRNA, complete sequence
          Length = 501

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 102/127 (80%)
 Strand = Plus / Minus

                                                                       
Query: 134 ccttcttcttctgccacagcctgtccagggagccatcagcatcaccctgagcacggacga 193
           |||||||||||||||| |||||||||| |   |  || || || |||||||||||||| |
Sbjct: 314 ccttcttcttctgccagagcctgtccacgccactgtctgcgtctccctgagcacggacaa 255

                                                                       
Query: 194 acccagagagagcaaaggtggtgaagcggccatcatagaggccattctcatcaacgtgac 253
           | ||  |||||||||| ||||||||  |||||   ||||| |||||  ||||||  ||||
Sbjct: 254 atccgcagagagcaaaagtggtgaattggccagtgtagagaccattagcatcaagatgac 195

                  
Query: 254 caatgtt 260
           |||||||
Sbjct: 194 caatgtt 188
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>ref|XM_451253.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A05700g predicted mRNA
          Length = 264

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 256 atgttgatctggacagaggcatggtccttggccgtgatgatcctgttggt 305
           |||||||| ||||| ||||  |||||||||||| ||||||| ||||||||
Sbjct: 107 atgttgatttggacggaggagtggtccttggccttgatgattctgttggt 58
to top
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 256    atgttgatctggacagaggcatggtccttggccgtgatgatcctgttggt 305
              |||||||| ||||| ||||  |||||||||||| ||||||| ||||||||
Sbjct: 533599 atgttgatttggacggaggagtggtccttggccttgatgattctgttggt 533550
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>ref|NM_201191.1| Danio rerio ribosomal protein S21 (rps21), mRNA
          Length = 398

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 254 caatgttgatctggacagaggcatggtccttggc 287
           |||||||||||||||  |||||||||||||||||
Sbjct: 174 caatgttgatctggatggaggcatggtccttggc 141
to top
>gb|BC071475.1| Danio rerio ribosomal protein S21, mRNA (cDNA clone MGC:86816
           IMAGE:6901503), complete cds
          Length = 405

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 254 caatgttgatctggacagaggcatggtccttggc 287
           |||||||||||||||  |||||||||||||||||
Sbjct: 174 caatgttgatctggatggaggcatggtccttggc 141
to top
>gb|BC049056.1| Danio rerio ribosomal protein S21, mRNA (cDNA clone MGC:56642
           IMAGE:5916082), complete cds
          Length = 398

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 254 caatgttgatctggacagaggcatggtccttggc 287
           |||||||||||||||  |||||||||||||||||
Sbjct: 174 caatgttgatctggatggaggcatggtccttggc 141
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>ref|NM_122652.2| Arabidopsis thaliana structural constituent of ribosome AT5G27700
           mRNA, complete cds
          Length = 553

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 250 tgaccaatgttgatctggacagaggcatggtccttgg 286
           ||||||||||||| ||| ||||||||||| |||||||
Sbjct: 195 tgaccaatgttgagctgaacagaggcatgatccttgg 159



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 169 tcagcatcaccctgagcacggacgaacccagagagagcaaaggtggtgaa 218
           ||||| || |||||||||||||| || ||  ||||||||||||| |||||
Sbjct: 276 tcagcgtctccctgagcacggacaaaaccgcagagagcaaaggttgtgaa 227



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccttcttcttctgccacagcctgtc 158
           |||||||||||||||||| ||||||
Sbjct: 311 ccttcttcttctgccacaacctgtc 287
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>gb|AY080873.1| Arabidopsis thaliana At5g27700 mRNA sequence
          Length = 501

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 250 tgaccaatgttgatctggacagaggcatggtccttgg 286
           ||||||||||||| ||| ||||||||||| |||||||
Sbjct: 195 tgaccaatgttgagctgaacagaggcatgatccttgg 159



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 169 tcagcatcaccctgagcacggacgaacccagagagagcaaaggtggtgaa 218
           ||||| || |||||||||||||| || ||  ||||||||||||| |||||
Sbjct: 276 tcagcgtctccctgagcacggacaaaaccgcagagagcaaaggttgtgaa 227



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccttcttcttctgccacagcctgtc 158
           |||||||||||||||||| ||||||
Sbjct: 311 ccttcttcttctgccacaacctgtc 287
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>emb|BX831050.1|CNS0A0SD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS53ZD05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 454

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 250 tgaccaatgttgatctggacagaggcatggtccttgg 286
           ||||||||||||| ||| ||||||||||| |||||||
Sbjct: 186 tgaccaatgttgagctgaacagaggcatgatccttgg 150



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 169 tcagcatcaccctgagcacggacgaacccagagagagcaaaggtggtgaa 218
           ||||| || |||||||||||||| || ||  ||||||||||||| |||||
Sbjct: 267 tcagcgtctccctgagcacggacaaaaccgcagagagcaaaggttgtgaa 218



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccttcttcttctgccacagcctgtc 158
           |||||||||||||||||| ||||||
Sbjct: 302 ccttcttcttctgccacaacctgtc 278
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>gb|AY089203.1| Arabidopsis thaliana clone 93174 mRNA, complete sequence
          Length = 477

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 250 tgaccaatgttgatctggacagaggcatggtccttgg 286
           ||||||||||||| ||| ||||||||||| |||||||
Sbjct: 194 tgaccaatgttgagctgaacagaggcatgatccttgg 158



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 169 tcagcatcaccctgagcacggacgaacccagagagagcaaaggtggtgaa 218
           ||||| || |||||||||||||| || ||  ||||||||||||| |||||
Sbjct: 275 tcagcgtctccctgagcacggacaaaaccgcagagagcaaaggttgtgaa 226



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccttcttcttctgccacagcctgtc 158
           |||||||||||||||||| ||||||
Sbjct: 310 ccttcttcttctgccacaacctgtc 286
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>gb|AC069556.4|AC069556 Genomic Sequence For Arabidopsis thaliana Clone T1G16 From Chromosome
             V, complete sequence
          Length = 93672

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 250   tgaccaatgttgatctggacagaggcatggtccttgg 286
             ||||||||||||| ||| ||||||||||| |||||||
Sbjct: 28082 tgaccaatgttgagctgaacagaggcatgatccttgg 28118



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 134   ccttcttcttctgccacagcctgtc 158
             |||||||||||||||||| ||||||
Sbjct: 27815 ccttcttcttctgccacaacctgtc 27839



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 179   cctgagcacggacgaacccagagagagcaaaggtggtgaa 218
             ||||||||||||| || ||  ||||||||||||| |||||
Sbjct: 28011 cctgagcacggacaaaaccgcagagagcaaaggttgtgaa 28050
to top
>gb|BC077773.1| Xenopus laevis ribosomal protein S21, mRNA (cDNA clone MGC:80094
           IMAGE:4963797), complete cds
          Length = 449

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 271 gaggcatggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgtag 330
           ||||||||||||||||||   ||||| |||||| | || ||||| || | ||||||||||
Sbjct: 135 gaggcatggtccttggccccaatgattctgttgctcgctgagcatttacgggggacgtag 76

                   
Query: 331 aggtccac 338
           || |||||
Sbjct: 75  agatccac 68
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                          
Query: 254    caatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagc 313
              ||||||||||||| || ||  | |||||||| ||| ||||||| ||||||||||| || |
Sbjct: 806207 caatgttgatctgcacggaaccgtggtccttagccttgatgattctgttggtggcagaac 806266

                  
Query: 314    actt 317
              ||||
Sbjct: 806267 actt 806270
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>ref|NM_209010.1| Eremothecium gossypii ACR255Cp (ACR255C), mRNA
          Length = 264

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 254 caatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagc 313
           ||||||||||||| || ||  | |||||||| ||| ||||||| ||||||||||| || |
Sbjct: 109 caatgttgatctgcacggaaccgtggtccttagccttgatgattctgttggtggcagaac 50

               
Query: 314 actt 317
           ||||
Sbjct: 49  actt 46
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>dbj|AP004498.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT06A20, TM0030,
            complete sequence
          Length = 82599

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 253  ccaatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggc 308
            |||||||||||||| || || ||||||||||| || ||||| | |||||| |||||
Sbjct: 6942 ccaatgttgatctgaacggaagcatggtcctttgcagtgatcaacctgtttgtggc 6997



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 129  ctcagccttcttcttctgccacag 152
            ||||||||||||||||||||||||
Sbjct: 6062 ctcagccttcttcttctgccacag 6085
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>ref|XM_628993.1| Dictyostelium discoideum 40S ribosomal protein S21 (DDB0231061),
           partial mRNA
          Length = 234

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 247 acgtgaccaatgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtg 306
           |||||||||||||| || ||||| || || || |||||||| ||||| |  | |||||||
Sbjct: 107 acgtgaccaatgttaatttggacggaagcgtgatccttggcggtgattaaacggttggtg 48

                      
Query: 307 gcggagcactt 317
           || ||||||||
Sbjct: 47  gcagagcactt 37
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>emb|AL132960.2|ATF5K20 Arabidopsis thaliana DNA chromosome 3, BAC clone F5K20
          Length = 119407

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 134   ccttcttcttctgccacagcctgtcca 160
             |||||||||||||||| ||||||||||
Sbjct: 58111 ccttcttcttctgccagagcctgtcca 58137



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                         
Query: 179   cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
             ||||||||||||| || ||  |||||||||| ||||||||  |||||   ||||| ||||
Sbjct: 58261 cctgagcacggacaaatccgcagagagcaaaagtggtgaattggccagtgtagagaccat 58320

                                   
Query: 239   tctcatcaacgtgaccaatgtt 260
             |  ||||||  |||||||||||
Sbjct: 58321 tagcatcaagatgaccaatgtt 58342
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>gb|AF402830.1| Ictalurus punctatus 40S ribosomal protein S21 mRNA, complete cds
          Length = 371

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 254 caatgttgatctggacagaggcatggtcctt 284
           |||||||||||||||  ||||||||||||||
Sbjct: 156 caatgttgatctggatggaggcatggtcctt 126
to top
>emb|BX822942.1|CNS0A7TM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZF07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 495

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 134 ccttcttcttctgccacagcctgtcca 160
           |||||||||||||||| ||||||||||
Sbjct: 284 ccttcttcttctgccagagcctgtcca 258



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 178 ccctgagcacggacgaacccagagagagcaaaggtggtgaa 218
           |||||||||||||| || ||  |||||||||| ||||||||
Sbjct: 240 ccctgagcacggacaaatccgcagagagcaaaagtggtgaa 200
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>emb|BX832972.1|CNS0A23G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL27ZB05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 442

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 252 accaatgttgatctggacagaggcatg 278
           ||||||||||||||| |||||||||||
Sbjct: 178 accaatgttgatctgaacagaggcatg 152
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>emb|BX842222.1|CNS09YDV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZB11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 507

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 134 ccttcttcttctgccacagcctgtcca 160
           |||||||||||||||| ||||||||||
Sbjct: 296 ccttcttcttctgccagagcctgtcca 270
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>gb|AC107819.8| Mus musculus chromosome 9, clone RP23-158E1, complete sequence
          Length = 172309

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 69    agacatgggaaggaaacaagtt 90
             ||||||||||||||||||||||
Sbjct: 29458 agacatgggaaggaaacaagtt 29437
to top
>dbj|AB024028.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K1G2
          Length = 70952

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 85/106 (80%)
 Strand = Plus / Plus

                                                                         
Query: 179   cctgagcacggacgaacccagagagagcaaaggtggtgaagcggccatcatagaggccat 238
             ||||||||||||| || ||  ||||||||||||| |||||  | |||   ||||| ||||
Sbjct: 58761 cctgagcacggacaaaaccgcagagagcaaaggtagtgaattgaccagtgtagagtccat 58820

                                                           
Query: 239   tctcatcaacgtgaccaatgttgatctggacagaggcatggtcctt 284
             |  ||||||  ||||||||||||| ||| || || ||||| |||||
Sbjct: 58821 tagcatcaagatgaccaatgttgagctgcactgaagcatgatcctt 58866
to top
>gb|AY440700.1| Armigeres subalbatus ASAP ID: 39387 cytosolic small ribosomal
           subunit S21 mRNA sequence
          Length = 394

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 256 atgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcac 315
           |||||||||||||  |||||||||||||| ||   |||||| | |||| |||  ||||||
Sbjct: 176 atgttgatctggatggaggcatggtccttagcgtggatgattcggttgctggacgagcac 117

                
Query: 316 ttcct 320
           |||||
Sbjct: 116 ttcct 112
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>gb|AY617524.1| Sterkiella histriomuscorum clone UGC1O0002_P16_R genomic sequence
          Length = 685

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 280 tccttggccgtgatgatcctgttggtggcggagcacttcctggggacgtagag 332
           |||||||| |||||||  ||||||||||| ||||| || || |||| ||||||
Sbjct: 475 tccttggcagtgatgagtctgttggtggcagagcattttcttgggatgtagag 527
to top
>gb|AY433229.1| Aedes aegypti ASAP ID: 34237 cytosolic small ribosomal subunit S21
           mRNA sequence
          Length = 390

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 256 atgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcac 315
           |||||||||||||  |||||||| ||||||||   |||||| | |||| |||  ||||||
Sbjct: 174 atgttgatctggatggaggcatgatccttggcgtggatgattcggttgctggacgagcac 115

                
Query: 316 ttcct 320
           |||||
Sbjct: 114 ttcct 110
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>gb|DQ440269.1| Aedes aegypti clone AET-342 40S ribosomal protein S21 mRNA,
           complete cds
          Length = 252

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 256 atgttgatctggacagaggcatggtccttggccgtgatgatcctgttggtggcggagcac 315
           |||||||||||||  |||||||| ||||||||   |||||| | |||| |||  ||||||
Sbjct: 107 atgttgatctggatggaggcatgatccttggcgtggatgattcggttgctggacgagcac 48

                
Query: 316 ttcct 320
           |||||
Sbjct: 47  ttcct 43
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>gb|AC124449.3| Mus musculus BAC clone RP24-212N10 from chromosome 15, complete
             sequence
          Length = 165858

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 144   ctgccacagcctgtccaggga 164
             |||||||||||||||||||||
Sbjct: 92406 ctgccacagcctgtccaggga 92426
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>ref|XM_753668.1| Ustilago maydis 521 hypothetical protein (UM02614.1) partial mRNA
          Length = 1707

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 294  gatcctgttggtggcggagca 314
            |||||||||||||||||||||
Sbjct: 1090 gatcctgttggtggcggagca 1110
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>ref|XM_846040.1| PREDICTED: Canis familiaris similar to reverse transcriptase
            (LOC608895), mRNA
          Length = 2184

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 295  atcctgttggtggcggagcac 315
            |||||||||||||||||||||
Sbjct: 1189 atcctgttggtggcggagcac 1209
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>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 277     tggtccttggccgtgatgatcctgttggtggcggagcacttcctggggacgta 329
               |||||||||||| | ||||| ||||||||||| || || || || ||||||||
Sbjct: 1259221 tggtccttggccttcatgattctgttggtggcagaacattttcttgggacgta 1259273
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>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence
          Length = 187350

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 144    ctgccacagcctgtccaggga 164
              |||||||||||||||||||||
Sbjct: 111633 ctgccacagcctgtccaggga 111653
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>emb|AL115904.1|CNS01CRS Botrytis cinerea strain T4 cDNA library
          Length = 480

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 277 tggtccttggccgtgatgatcctgttggtggcg 309
           |||||||||||| ||||||| | ||||||||||
Sbjct: 153 tggtccttggccttgatgatacggttggtggcg 121
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>emb|AL113374.1|CNS01ATI Botrytis cinerea strain T4 cDNA library
          Length = 516

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 277 tggtccttggccgtgatgatcctgttggtggcg 309
           |||||||||||| ||||||| | ||||||||||
Sbjct: 153 tggtccttggccttgatgatacggttggtggcg 121
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>emb|AL112415.1|CNS01A2V Botrytis cinerea strain T4 cDNA library
          Length = 420

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 277 tggtccttggccgtgatgatcctgttggtggcg 309
           |||||||||||| ||||||| | ||||||||||
Sbjct: 102 tggtccttggccttgatgatacggttggtggcg 70
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>emb|AL111395.1|CNS019AJ Botrytis cinerea strain T4 cDNA library
          Length = 480

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 277 tggtccttggccgtgatgatcctgttggtggcg 309
           |||||||||||| ||||||| | ||||||||||
Sbjct: 101 tggtccttggccttgatgatacggttggtggcg 69
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>emb|BX842195.1|CNS09YE4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL46ZG11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 525

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 134 ccttcttcttctgccacagcctgtc 158
           |||||||||||||||| ||||||||
Sbjct: 299 ccttcttcttctgccagagcctgtc 275
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>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence
          Length = 154390

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   gagctgcttgacctcagcct 136
             ||||||||||||||||||||
Sbjct: 60162 gagctgcttgacctcagcct 60143
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>gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosome 3, complete sequence
          Length = 205852

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ggacagaggcatggtccttg 285
             ||||||||||||||||||||
Sbjct: 46416 ggacagaggcatggtccttg 46397
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     tggccgtgatgatcctgttg 303
               ||||||||||||||||||||
Sbjct: 3043389 tggccgtgatgatcctgttg 3043408
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>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence
          Length = 176356

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 117    gagctgcttgacctcagcct 136
              ||||||||||||||||||||
Sbjct: 152418 gagctgcttgacctcagcct 152437
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>emb|AL034426.5|HS580G13 Human DNA sequence from clone RP4-580G13 on chromosome 20p11.2-11.21
              Contains a GAPD (glyceraldehyde-3-phosphate dehydrogenase)
              pseudogene, the 5' end of the C20orf39 gene for chromosome
              20 open reading frame 39 and a CpG island, complete
              sequence
          Length = 148642

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cagcatcaccctgagcacgg 189
              ||||||||||||||||||||
Sbjct: 130114 cagcatcaccctgagcacgg 130095
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>emb|BX058617.1|CNS09HE5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC39AE02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 296

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 48  atgttgatctggatggaggcatgatccttggc 17
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>emb|BX041174.1|CNS093XM Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC12BF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 401

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 194 atgttgatctggatggaggcatgatccttggc 225
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>emb|BX041173.1|CNS093XL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC12BF04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 300

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 48  atgttgatctggatggaggcatgatccttggc 17
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>emb|BX035975.1|CNS08ZX7 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA7CC08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 407

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 189 atgttgatctggatggaggcatgatccttggc 220
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>emb|BX035570.1|CNS08ZLY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA6DH08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 287

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 209 atgttgatctggatggaggcatgatccttggc 240
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>emb|BX035569.1|CNS08ZLX Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA6DH08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 427

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 178 atgttgatctggatggaggcatgatccttggc 147
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>emb|BX033338.1|CNS08XVY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA49DB02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 280

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 48  atgttgatctggatggaggcatgatccttggc 17
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>emb|BX023552.1|CNS08QC4 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA36AA06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 513

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 241 atgttgatctggatggaggcatgatccttggc 210
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>emb|BX017491.1|CNS08LNR Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA26BG04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 313

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 48  atgttgatctggatggaggcatgatccttggc 17
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>emb|BX016580.1|CNS08KYG Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA24DG08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 423

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 182 atgttgatctggatggaggcatgatccttggc 151
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>emb|BX006574.1|CNS08D8I Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA11AE04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 305

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 atgttgatctggacagaggcatggtccttggc 287
           |||||||||||||  |||||||| ||||||||
Sbjct: 48  atgttgatctggatggaggcatgatccttggc 17
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>gb|AC104831.3| Homo sapiens 3 BAC RP11-451G4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 118   agctgcttgacctcagccttcttcttct 145
             ||||||||||||| ||||||| ||||||
Sbjct: 57177 agctgcttgacctaagccttcctcttct 57150
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>gb|AC010856.12| Homo sapiens chromosome 8, clone RP11-138J2, complete sequence
          Length = 27312

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  gcatggtggcagctggaggg 378
            ||||||||||||||||||||
Sbjct: 3493 gcatggtggcagctggaggg 3512
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>gb|AD000864.1|CH19R28051 Homo sapiens DNA from chromosome 19-cosmid R28051  containing
           APLP1, genomic sequence
          Length = 39146

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 64  taggtagacatgggaaggaa 83
           ||||||||||||||||||||
Sbjct: 117 taggtagacatgggaaggaa 98
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>gb|AC124649.6| Homo sapiens chromosome 8, clone RP11-23I8, complete sequence
          Length = 191004

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 359    gcatggtggcagctggaggg 378
              ||||||||||||||||||||
Sbjct: 185861 gcatggtggcagctggaggg 185880
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>gb|AC012497.8| Homo sapiens BAC clone RP11-349I7 from 2, complete sequence
          Length = 212104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   acagaggcatggtccttggc 287
             ||||||||||||||||||||
Sbjct: 17290 acagaggcatggtccttggc 17271
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>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence
          Length = 199954

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   cctcagccttcttcttctgc 147
             ||||||||||||||||||||
Sbjct: 53837 cctcagccttcttcttctgc 53856
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>gb|AC002133.1|AC002133 Human DNA from chromosome 19 cosmid R33502, genomic sequence, complete
             sequence
          Length = 41525

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    taggtagacatgggaaggaa 83
             ||||||||||||||||||||
Sbjct: 40977 taggtagacatgggaaggaa 40958
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>dbj|AP006139.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT02A16, TM0243,
             complete sequence
          Length = 86350

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 129   ctcagccttcttcttctgccacag 152
             ||||||||||||| ||||||||||
Sbjct: 33917 ctcagccttcttcctctgccacag 33894
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>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151,
             complete sequence
          Length = 109264

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 129   ctcagccttcttcttctgccacag 152
             |||||||||||||||||| |||||
Sbjct: 31277 ctcagccttcttcttctgtcacag 31300


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,540,331
Number of Sequences: 3902068
Number of extensions: 4540331
Number of successful extensions: 75715
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75442
Number of HSP's gapped (non-prelim): 258
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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