Clone Name | rbastl43h03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MRPD_BACSU (O05229) Na(+)/H(+) antiporter subunit D (Multiple re... | 30 | 3.2 | 2 | CP312_DROME (Q9VVN6) Probable cytochrome P450 312a1 (EC 1.14.-.-... | 28 | 9.4 | 3 | MURC_BUCAI (P57310) UDP-N-acetylmuramate--L-alanine ligase (EC 6... | 28 | 9.4 |
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>MRPD_BACSU (O05229) Na(+)/H(+) antiporter subunit D (Multiple resistance and| pH homeostasis protein D) (Mrp complex subunit D) Length = 493 Score = 29.6 bits (65), Expect = 3.2 Identities = 12/44 (27%), Positives = 24/44 (54%) Frame = +3 Query: 129 NILFFLNAELCASNTILLTRHSFWENEEENPQTTFQHGKASVYP 260 ++L L++ L + + + H+FW E+E P+ + K +YP Sbjct: 408 SMLILLSSLLVLYSVLRIFIHAFWGEEKETPKPNHRTAKGLLYP 451
>CP312_DROME (Q9VVN6) Probable cytochrome P450 312a1 (EC 1.14.-.-) (CYPCCCXIIA1)| Length = 510 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +3 Query: 270 PTELKFTGKIS*LAKLIIP*ELR*LPKLFMVQLDLQKLXAWLTTPVILID 419 P L F G + LAKL+ P LR ++ L + W+ T + L+D Sbjct: 37 PPALPFIGHLHILAKLVGPHPLRRATEMINEHLHDHRAKLWMGTKLYLVD 86
>MURC_BUCAI (P57310) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 484 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 290 GKNILTC*ANHPMRVEVVTQTLHGTA*SPKAXSMVDNAGNFD 415 GKN +T +NH M ++ + QTL G ++ AGN D Sbjct: 432 GKNYVTLISNHNMILDTLIQTLQG-----NDIILIQGAGNID 468 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,721,305 Number of Sequences: 219361 Number of extensions: 1263264 Number of successful extensions: 3209 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3198 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)