ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
2dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
3dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
4emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
5emb|Z69721.1|HSU201H11 Human DNA sequence from clone LL0XNC01-20... 44 0.37
6gb|AC005879.3|AC005879 citb_287_c_20, complete sequence 44 0.37
7emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chr... 44 0.37
8gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome... 42 1.5
9gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, compl... 42 1.5
10gb|AC073332.13| Homo sapiens BAC clone RP11-435M6 from 7, comple... 42 1.5
11gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, com... 42 1.5
12emb|AL160175.5| Human DNA sequence from clone RP11-243J16 on chr... 42 1.5
13ref|XM_693513.1| PREDICTED: Danio rerio similar to PI-3-kinase-r... 42 1.5
14ref|XM_693217.1| PREDICTED: Danio rerio similar to PI-3-kinase-r... 42 1.5
15emb|BX323078.8| Zebrafish DNA sequence from clone DKEYP-55A5 in ... 42 1.5
16emb|BX004999.8| Zebrafish DNA sequence from clone DKEY-66I24 in ... 42 1.5
17gb|AY996787.1| Cunninghamella elegans unknown mRNA 42 1.5
18gb|AC009962.11| Homo sapiens BAC clone RP11-366L5 from 2, comple... 42 1.5
19gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, comple... 42 1.5
20gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome ... 42 1.5
21gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosom... 40 5.8
22emb|CR352342.9| Zebrafish DNA sequence from clone CH211-134H7 in... 40 5.8
23emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on ch... 40 5.8
24emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chr... 40 5.8
25emb|AL034369.1|HSA149D17 Human DNA sequence from clone RP6-149D1... 40 5.8
26emb|X97751.1|SCIV23 S.cerevisiae chrIV genes STE7, CLB3, MSH5, R... 40 5.8
27emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BA... 40 5.8
28emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 40 5.8
29emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 i... 40 5.8
30gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park C... 40 5.8
31gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, com... 40 5.8
32emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chro... 40 5.8
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
34gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355... 40 5.8
35gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complet... 40 5.8
36dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37emb|CR753886.11| Zebrafish DNA sequence from clone DKEY-189E1 in... 40 5.8
38emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in ... 40 5.8
39emb|Z74196.1|SCYDL148C S.cerevisiae chromosome IV reading frame ... 40 5.8
40emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2... 40 5.8
41emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on ch... 40 5.8
42emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on ch... 40 5.8 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 190      attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 245
                ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 22320973 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 22320918
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>dbj|AK068842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162C23, full
            insert sequence
          Length = 3754

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 190  attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 245
            ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 3621 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 3566
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>dbj|AK060713.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C12, full
            insert sequence
          Length = 1344

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 190  attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 245
            ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 1205 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 1150
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 190   attccttctgggaaaatgaagaagaaaatcctcaaaccacttttcagcatggaaaa 245
             ||||||||||||||||||| | |||||| | | ||||| |||||||||| ||||||
Sbjct: 71877 attccttctgggaaaatgagggagaaaaccttaaaacctcttttcagcagggaaaa 71822
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>emb|Z69721.1|HSU201H11 Human DNA sequence from clone LL0XNC01-201H11 on chromosome X Contains
             part of the IL1RAPL2 gene for  interleukin 1 receptor
             accessory protein-like 2, complete sequence
          Length = 32886

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 195   ttctgggaaaatgaagaagaaa 216
             ||||||||||||||||||||||
Sbjct: 21224 ttctgggaaaatgaagaagaaa 21203
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>gb|AC005879.3|AC005879 citb_287_c_20, complete sequence
          Length = 190982

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 202    aaaatgaagaagaaaatcctca 223
              ||||||||||||||||||||||
Sbjct: 176727 aaaatgaagaagaaaatcctca 176748
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>emb|AL772205.12| Mouse DNA sequence from clone RP23-162C3 on chromosome 2, complete
              sequence
          Length = 142565

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 112    agaagtataaaaaagaaaacatccta 137
              ||||||||||||||||||| ||||||
Sbjct: 132173 agaagtataaaaaagaaaagatccta 132148
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>gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome 1, complete sequence
          Length = 141921

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 337    ggtagttacccaaactcttca 357
              |||||||||||||||||||||
Sbjct: 121300 ggtagttacccaaactcttca 121320
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>gb|AC115721.11| Mus musculus chromosome 3, clone RP23-9P8, complete sequence
          Length = 218746

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    aaatgaagaagaaaatcctca 223
              |||||||||||||||||||||
Sbjct: 208786 aaatgaagaagaaaatcctca 208806
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>gb|AC073332.13| Homo sapiens BAC clone RP11-435M6 from 7, complete sequence
          Length = 132191

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     ctttcttttctgaaacaagga 102
              |||||||||||||||||||||
Sbjct: 101856 ctttcttttctgaaacaagga 101836
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>gb|AC160549.5| Mus musculus chromosome 3, clone RP23-276K18, complete sequence
          Length = 157222

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 203    aaatgaagaagaaaatcctca 223
              |||||||||||||||||||||
Sbjct: 105136 aaatgaagaagaaaatcctca 105156
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>emb|AL160175.5| Human DNA sequence from clone RP11-243J16 on chromosome 20 Contains the
             BCL2L1 gene for the apoptosis regulator BCL2-like 1, the
             C20orf1 gene encoding the targeting protein for XKLP2
             (FLS353), the MYLK gene for myosin light chain kinase 2
             (skeletal muscle), the FKHL18 gene for forkhead-like 18
             (Drosophila)(FREAC10), an ATP synthase H+ transporting
             mitochondrial F0 complex subunit f isoform 2 (ATP5J2)
             pseudogene, the DUSP15 gene for dual specificity
             phosphatase-like 15, the 3' end of a novel gene, the 5'
             end of the C20orf125 gene and seven CpG islands, complete
             sequence
          Length = 168860

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   gagaagtataaaaaagaaaac 131
             |||||||||||||||||||||
Sbjct: 21072 gagaagtataaaaaagaaaac 21052
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>ref|XM_693513.1| PREDICTED: Danio rerio similar to PI-3-kinase-related kinase SMG-1
           (LOC570080), mRNA
          Length = 11034

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 aaccacttttcagcatggaaa 244
           |||||||||||||||||||||
Sbjct: 447 aaccacttttcagcatggaaa 467
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>ref|XM_693217.1| PREDICTED: Danio rerio similar to PI-3-kinase-related kinase SMG-1
           (LOC569810), mRNA
          Length = 11022

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 aaccacttttcagcatggaaa 244
           |||||||||||||||||||||
Sbjct: 447 aaccacttttcagcatggaaa 467
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>emb|BX323078.8| Zebrafish DNA sequence from clone DKEYP-55A5 in linkage group 3, complete
              sequence
          Length = 174108

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    aaccacttttcagcatggaaa 244
              |||||||||||||||||||||
Sbjct: 147114 aaccacttttcagcatggaaa 147094
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>emb|BX004999.8| Zebrafish DNA sequence from clone DKEY-66I24 in linkage group 3, complete
              sequence
          Length = 168839

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    aaccacttttcagcatggaaa 244
              |||||||||||||||||||||
Sbjct: 132305 aaccacttttcagcatggaaa 132285
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>gb|AY996787.1| Cunninghamella elegans unknown mRNA
          Length = 916

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 120 aaaaaagaaaacatcctattc 140
           |||||||||||||||||||||
Sbjct: 655 aaaaaagaaaacatcctattc 675
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>gb|AC009962.11| Homo sapiens BAC clone RP11-366L5 from 2, complete sequence
          Length = 177512

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     agaaaattatgcaaaatttta 24
             |||||||||||||||||||||
Sbjct: 51140 agaaaattatgcaaaatttta 51120
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>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence
          Length = 198278

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 1      aaaagaaaattatgcaaaattttagatca 29
              |||| ||||||||||||||||||| ||||
Sbjct: 181709 aaaaaaaaattatgcaaaattttatatca 181737
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>gb|AC154793.2| Mus musculus BAC clone RP23-88B6 from chromosome 13, complete sequence
          Length = 182356

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 261   tgaaaaccccccacagagctg 281
             |||||||||||||||||||||
Sbjct: 54903 tgaaaaccccccacagagctg 54923
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>gb|AC154593.2| Mus musculus BAC clone RP23-350J12 from chromosome 14, complete sequence
          Length = 214057

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    cacttttcagcatggaaaag 246
              ||||||||||||||||||||
Sbjct: 112030 cacttttcagcatggaaaag 112049
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>emb|CR352342.9| Zebrafish DNA sequence from clone CH211-134H7 in linkage group 12,
              complete sequence
          Length = 186937

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 127    aaaacatcctattctttctg 146
              ||||||||||||||||||||
Sbjct: 165214 aaaacatcctattctttctg 165233
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>emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on chromosome 10 Contains a
              ribosomal protein L7 (RPL7) pseudogene, complete sequence
          Length = 200536

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    gagaagtataaaaaagaaaa 130
              ||||||||||||||||||||
Sbjct: 132440 gagaagtataaaaaagaaaa 132421
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>emb|AL157813.11| Human DNA sequence from clone RP11-165D7 on chromosome 13 Contains the
             CHC1L gene for chromosome condensation 1-like, 3 novel
             genes and a CpG island, complete sequence
          Length = 114519

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   gagaagtataaaaaagaaaa 130
             ||||||||||||||||||||
Sbjct: 83863 gagaagtataaaaaagaaaa 83844
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>emb|AL034369.1|HSA149D17 Human DNA sequence from clone RP6-149D17 on chromosome Xq22.2-23
             Contains the gene for a novel protein similar to
             pancreatic lipase-related protein 2 (PNLIPRP2), the 5' end
             of the COL4A6 gene for type IV alpha 6 collagen and the 5'
             end of the COL4A5 gene for type IV alpha 5 collagen
             (Alport syndrome), complete sequence
          Length = 122157

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ctttcttttctgaaacaagg 101
             ||||||||||||||||||||
Sbjct: 27341 ctttcttttctgaaacaagg 27322
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>emb|X97751.1|SCIV23 S.cerevisiae chrIV genes STE7, CLB3, MSH5, RPC53, RET1
          Length = 23096

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ttctgggaaaatgaagaaga 214
             ||||||||||||||||||||
Sbjct: 16896 ttctgggaaaatgaagaaga 16877
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>emb|AL080283.1|ATF3L17 Arabidopsis thaliana DNA chromosome 4, BAC clone F3L17 (ESSA project)
          Length = 94319

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aaaaaagaaaacatcctatt 139
             ||||||||||||||||||||
Sbjct: 40476 aaaaaagaaaacatcctatt 40457
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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   aaaaaagaaaacatcctatt 139
             ||||||||||||||||||||
Sbjct: 28541 aaaaaagaaaacatcctatt 28522
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>emb|BX511171.13| Zebrafish DNA sequence from clone DKEY-264K15 in linkage group 4
            Contains the ascl1a gene for achaete-scute complex-like
            1a (Drosophila), the gene for a novel protein similar to
            vertebrate RecQ protein-like DNA helicase Q1-like
            (RECQL), the gene for a novel protein similar to tyrosine
            hydroxylase (th), the pah gene for phenylalanine
            hydroxylase, the 5' end of the gene for a novel protein
            similar to vertebrate uncharacterized hematopoietic
            stem/progenitor cells protein MDS028 (MDS028) and a CpG
            island, complete sequence
          Length = 166242

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  tgggaaaatgaagaagaaaa 217
            ||||||||||||||||||||
Sbjct: 3466 tgggaaaatgaagaagaaaa 3485
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>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 190858

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 218  tcctcaaaccacttttcagc 237
            ||||||||||||||||||||
Sbjct: 7843 tcctcaaaccacttttcagc 7862
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>gb|AC022387.8| Homo sapiens chromosome 10 clone RP11-111N20, complete sequence
          Length = 185819

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   gagaagtataaaaaagaaaa 130
             ||||||||||||||||||||
Sbjct: 26079 gagaagtataaaaaagaaaa 26060
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>emb|CR385036.3| Human DNA sequence from clone WI2-2890K7 on chromosome 9, complete
             sequence
          Length = 26133

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tttcttttctgaaacaagga 102
             ||||||||||||||||||||
Sbjct: 15806 tttcttttctgaaacaagga 15825
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 8        aattatgcaaaattttagat 27
                ||||||||||||||||||||
Sbjct: 35699023 aattatgcaaaattttagat 35699042
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>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete
             sequence
          Length = 173386

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   gaaaatcctcaaaccacttt 232
             ||||||||||||||||||||
Sbjct: 62330 gaaaatcctcaaaccacttt 62311
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>gb|AC007282.4| Homo sapiens BAC clone RP11-484N9 from 2, complete sequence
          Length = 182632

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aagaaaattatgcaaaattt 22
             ||||||||||||||||||||
Sbjct: 40769 aagaaaattatgcaaaattt 40788
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>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_D06
          Length = 102239

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     aattatgcaaaattttagat 27
             ||||||||||||||||||||
Sbjct: 59637 aattatgcaaaattttagat 59656
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>emb|CR753886.11| Zebrafish DNA sequence from clone DKEY-189E1 in linkage group 24,
             complete sequence
          Length = 142977

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 120   aaaaaagaaaacatcctattcttt 143
             |||||| |||||||||||||||||
Sbjct: 82494 aaaaaaaaaaacatcctattcttt 82517
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>emb|BX914215.7| Zebrafish DNA sequence from clone DKEY-245F7 in linkage group 4,
             complete sequence
          Length = 141185

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tgggaaaatgaagaagaaaa 217
             ||||||||||||||||||||
Sbjct: 59199 tgggaaaatgaagaagaaaa 59180
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>emb|Z74196.1|SCYDL148C S.cerevisiae chromosome IV reading frame ORF YDL148c
          Length = 3005

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  ttctgggaaaatgaagaaga 214
            ||||||||||||||||||||
Sbjct: 1666 ttctgggaaaatgaagaaga 1647
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>emb|AL133162.4|CNS01DU5 Human chromosome 14 DNA sequence BAC C-2591A6 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196431

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 202   aaaatgaagaagaaaatcctcaaa 225
             ||||| ||||||||||||||||||
Sbjct: 94938 aaaattaagaagaaaatcctcaaa 94915
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>emb|CT010582.12| Mouse DNA sequence from clone RP23-385M20 on chromosome 14, complete
              sequence
          Length = 216611

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    cacttttcagcatggaaaag 246
              ||||||||||||||||||||
Sbjct: 168711 cacttttcagcatggaaaag 168730
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>emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete
              sequence
          Length = 173477

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ataaaaaagaaaacatccta 137
              ||||||||||||||||||||
Sbjct: 154817 ataaaaaagaaaacatccta 154798


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,114,771
Number of Sequences: 3902068
Number of extensions: 6114771
Number of successful extensions: 119574
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119423
Number of HSP's gapped (non-prelim): 151
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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