ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43h02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds 432 e-118
2gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRN... 424 e-116
3gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full... 115 6e-23
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 2e-16
5emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 94 2e-16
6gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genom... 94 2e-16
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 2e-16
8dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 2e-16
9ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA 92 9e-16
10gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-... 92 9e-16
11gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds 84 2e-13
12gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds 84 2e-13
13gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequ... 76 5e-11
14ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA 70 3e-09
15gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 70 3e-09
16gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genom... 70 3e-09
17gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full ... 68 1e-08
18gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complet... 64 2e-07
19gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence 60 3e-06
20gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 ge... 60 3e-06
21gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 ge... 60 3e-06
22gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 ge... 60 3e-06
23gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 ge... 60 3e-06
24gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 ge... 60 3e-06
25gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 ge... 60 3e-06
26gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 ge... 60 3e-06
27gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 ge... 60 3e-06
28gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 ge... 60 3e-06
29gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 ge... 60 3e-06
30gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 ge... 60 3e-06
31gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 ge... 60 3e-06
32gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 ge... 60 3e-06
33gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 geno... 60 3e-06
34ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA 56 5e-05
35ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA 56 5e-05
36gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual posit... 56 5e-05
37dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
38dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
39dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
40dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
41gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partia... 54 2e-04
42gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, ... 46 0.047
43gb|AY103567.1| Zea mays PCO116252 mRNA sequence 44 0.18
44emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354... 40 2.9
45emb|AL671969.39| Mouse DNA sequence from clone RP23-339O7 on chr... 40 2.9
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
47gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
48dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
49dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.9
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
51emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 40 2.9
52emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on ch... 40 2.9
53gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible l... 40 2.9
54gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9 
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds
          Length = 2818

 Score =  432 bits (218), Expect = e-118
 Identities = 223/225 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740

                                                                        
Query: 61   agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680

                                                                        
Query: 121  ccatggttgccgatggcttagattagatggagatgctgttgggggtgcccttggcggtaa 180
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620

                                                         
Query: 181  gcccggcagcggcgcccttgtggtcggaggtgttggggtngagca 225
            ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2619 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagca 2575
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>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds
          Length = 1331

 Score =  424 bits (214), Expect = e-116
 Identities = 222/225 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1    ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1228 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 1169

                                                                        
Query: 61   agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 1109

                                                                        
Query: 121  ccatggttgccgatggcttagattagatggagatgctgttgggggtgcccttggcggtaa 180
            |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 1108 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 1049

                                                         
Query: 181  gcccggcagcggcgcccttgtggtcggaggtgttggggtngagca 225
            ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1048 gcccggcagcggcgcccttgtggtcggaggtgttggggtagagca 1004
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>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA
           sequence
          Length = 1020

 Score =  115 bits (58), Expect = 6e-23
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||| |
Sbjct: 751 agatggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgat 692

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 691 cggaggtgttggggtagagca 671
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 140      agattagatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgccctt 199
                |||| |||||||||||||||||||| ||||| ||||||  || ||||||||| |||||||
Sbjct: 30026452 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30026393

                                          
Query: 200      gtggtcggaggtgttggggtngagca 225
                | ||||||||||||| |||| |||||
Sbjct: 30026392 gaggtcggaggtgtttgggtagagca 30026367



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                            
Query: 145      agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
                |||| ||||||||||||||| ||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 27803105 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 27803046

                               
Query: 205      cggaggtgttggggt 219
                |||||||||||||||
Sbjct: 27803045 cggaggtgttggggt 27803031



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 145      agatggagatgctgttgggggtgcccttggcggtaagccc 184
                |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 27821684 agatggagatgctgttggggatgcccatggcggtgagccc 27821645



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     agattagatggagatgctgttggg 163
               |||| |||||||||||||||||||
Sbjct: 4174771 agatcagatggagatgctgttggg 4174748
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>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2
          Length = 2830

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 140  agattagatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgccctt 199
            |||| |||||||||||||||||||| ||||| ||||||  || ||||||||| |||||||
Sbjct: 2698 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2639

                                      
Query: 200  gtggtcggaggtgttggggtngagca 225
            | ||||||||||||| |||| |||||
Sbjct: 2638 gaggtcggaggtgtttgggtagagca 2613
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>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete
             sequence
          Length = 155106

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                         
Query: 140   agattagatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgccctt 199
             |||| |||||||||||||||||||| ||||| ||||||  || ||||||||| |||||||
Sbjct: 81299 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 81358

                                       
Query: 200   gtggtcggaggtgttggggtngagca 225
             | ||||||||||||| |||| |||||
Sbjct: 81359 gaggtcggaggtgtttgggtagagca 81384
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                            
Query: 140      agattagatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgccctt 199
                |||| |||||||||||||||||||| ||||| ||||||  || ||||||||| |||||||
Sbjct: 30117874 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 30117815

                                          
Query: 200      gtggtcggaggtgttggggtngagca 225
                | ||||||||||||| |||| |||||
Sbjct: 30117814 gaggtcggaggtgtttgggtagagca 30117789



 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                            
Query: 145      agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
                |||| ||||||||||||||| ||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 27894429 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 27894370

                               
Query: 205      cggaggtgttggggt 219
                |||||||||||||||
Sbjct: 27894369 cggaggtgttggggt 27894355



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                        
Query: 145      agatggagatgctgttgggggtgcccttggcggtaagccc 184
                |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 27913008 agatggagatgctgttggggatgcccatggcggtgagccc 27912969



 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     agattagatggagatgctgttggg 163
               |||| |||||||||||||||||||
Sbjct: 4174880 agatcagatggagatgctgttggg 4174857
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>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full
            insert sequence
          Length = 2928

 Score = 93.7 bits (47), Expect = 2e-16
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 140  agattagatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgccctt 199
            |||| |||||||||||||||||||| ||||| ||||||  || ||||||||| |||||||
Sbjct: 2731 agatcagatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgccctt 2672

                                      
Query: 200  gtggtcggaggtgttggggtngagca 225
            | ||||||||||||| |||| |||||
Sbjct: 2671 gaggtcggaggtgtttgggtagagca 2646
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>ref|XM_469655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2613

 Score = 91.7 bits (46), Expect = 9e-16
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||||||||||||||||||| ||||| ||||||  || ||||||||| |||||||| |||
Sbjct: 2611 agatggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggt 2552

                                 
Query: 205  cggaggtgttggggtngagca 225
            |||||||||| |||| |||||
Sbjct: 2551 cggaggtgtttgggtagagca 2531
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>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds
          Length = 2267

 Score = 91.7 bits (46), Expect = 9e-16
 Identities = 72/81 (88%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||||||||||||||||||| |||||||||| || ||||| || ||||||||  ||||||
Sbjct: 2062 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 2003

                                 
Query: 205  cggaggtgttggggtngagca 225
            | ||||||||||||| |||||
Sbjct: 2002 cagaggtgttggggtagagca 1982
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>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds
          Length = 5013

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||||||||||||||||||| |||||||||| || ||||| || ||||||||  ||||||
Sbjct: 4660 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 4601

                                 
Query: 205  cggaggtgttggggtngagca 225
            | ||||||||||| | |||||
Sbjct: 4600 cagaggtgttgggatagagca 4580
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>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds
          Length = 2595

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||||||||||||||||||| |||||||||| || ||||| || ||||||||  ||||||
Sbjct: 2593 agatggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggt 2534

                                 
Query: 205  cggaggtgttggggtngagca 225
            | ||||||||||| | |||||
Sbjct: 2533 cagaggtgttgggatagagca 2513
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>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence
          Length = 934

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 153 atgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggtcggaggtg 212
           |||||||||||| ||||||||||||| || ||||| ||||| |||||||||||  |||||
Sbjct: 1   atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtcttaggtg 60

                        
Query: 213 ttggggtngagca 225
           || |||| |||||
Sbjct: 61  ttagggtagagca 73
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>ref|XM_469409.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2601

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                        
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
            |||| ||||||||||||||| ||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 2599 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 2540

                           
Query: 205  cggaggtgttggggt 219
            |||||||||||||||
Sbjct: 2539 cggaggtgttggggt 2525
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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                         
Query: 145   agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
             |||| ||||||||||||||| ||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 47235 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 47176

                            
Query: 205   cggaggtgttggggt 219
             |||||||||||||||
Sbjct: 47175 cggaggtgttggggt 47161



 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 145   agatggagatgctgttgggggtgcccttggcggtaagccc 184
             |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 65814 agatggagatgctgttggggatgcccatggcggtgagccc 65775
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>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete
             sequence
          Length = 119329

 Score = 69.9 bits (35), Expect = 3e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                         
Query: 145   agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
             |||| ||||||||||||||| ||||||||||||| |  ||||| ||||||||  ||  ||
Sbjct: 10788 agatcgagatgctgttggggatgcccttggcggtgatgccggcggcggcgccggtgacgt 10847

                            
Query: 205   cggaggtgttggggt 219
             |||||||||||||||
Sbjct: 10848 cggaggtgttggggt 10862
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>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA
           sequence
          Length = 1129

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||||||| ||||| |||| || |||||  | ||   |||| ||||||
Sbjct: 904 agatggagatgctgttggggatgcccctggccgtgagcccctcggcctggcccgtgtggt 845

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 844 cggaggtgttggggtagagca 824
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>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds
          Length = 2845

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                        
Query: 147  atggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggtcg 206
            |||||||||||||| ||  ||||||||||||| |  ||||| ||| |||||||   ||||
Sbjct: 2618 atggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgcccttcgtgtcg 2559

                               
Query: 207  gaggtgttggggtngagca 225
            ||||||||||||| |||||
Sbjct: 2558 gaggtgttggggtagagca 2540
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>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence
          Length = 810

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 794 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 735

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 734 cggaggtgttggggtagagca 714
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>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence
          Length = 805

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                       
Query: 145 agatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgcccttgtggt 204
           |||||||||||||||| ||  ||||||||||||| |  ||||| ||  |||| || | ||
Sbjct: 789 agatggagatgctgtttggaatgcccttggcggtgatgccggcggcatcgccattcttgt 730

                                
Query: 205 cggaggtgttggggtngagca 225
           ||||||||||||||| |||||
Sbjct: 729 cggaggtgttggggtagagca 709
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>ref|XM_469412.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2686

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 2444 agatggagatgctgttggggatgcccatggcggtgagccc 2405
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>ref|XM_469411.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3165

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 2923 agatggagatgctgttggggatgcccatggcggtgagccc 2884
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>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity
            lipoxygenase mRNA, complete cds
          Length = 3154

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 2917 agatggagatgctgttggggatgcccatggcggtgagccc 2878
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>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full
            insert sequence
          Length = 1560

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 1330 agatggagatgctgttggggatgcccatggcggtgagccc 1291
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>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full
            insert sequence
          Length = 2851

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 2595 agatggagatgctgttggggatgcccatggcggtgagccc 2556
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>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full
            insert sequence
          Length = 3167

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 2925 agatggagatgctgttggggatgcccatggcggtgagccc 2886
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>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full
            insert sequence
          Length = 1726

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 145  agatggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 1495 agatggagatgctgttggggatgcccatggcggtgagccc 1456
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>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds
          Length = 1814

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 145  agatggagatgctgttgggggtgcccttggc 175
            |||||||||||||||||||| ||||||||||
Sbjct: 1554 agatggagatgctgttggggatgcccttggc 1524
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>gb|L37358.1|BLYLOXC Hordeum vulgare lipoxygenase 2 (LoxC) mRNA, complete cds
          Length = 2910

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 140  agattagatggagatgctgttgggggtgcccttggcggtaagcccggcagcggcgccctt 199
            |||| ||||||| |||||||| ||| ||||| ||||||| |||||  | ||    ||| |
Sbjct: 2661 agatcagatggatatgctgttcgggatgcccctggcggtgagcccctcggcctgtcccgt 2602

                                      
Query: 200  gtggtcggaggtgttggggtngagca 225
            ||||||||||||||| |||| |||||
Sbjct: 2601 gtggtcggaggtgtttgggtagagca 2576
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>gb|AY103567.1| Zea mays PCO116252 mRNA sequence
          Length = 3135

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 147  atggagatgctgttgggggtgcccttggcggtaagccc 184
            |||||||||||||||||  ||||| |||| ||||||||
Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
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>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an
             STS and GSSs, complete sequence
          Length = 60837

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cacagacacacactacacca 77
             ||||||||||||||||||||
Sbjct: 58806 cacagacacacactacacca 58825
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>emb|AL671969.39| Mouse DNA sequence from clone RP23-339O7 on chromosome 11 Contains part
             of a novel gene and the Nmu2r gene for neuromedin U
             receptor 2, complete sequence
          Length = 118473

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   gatggagatgctgttggggg 165
             ||||||||||||||||||||
Sbjct: 52539 gatggagatgctgttggggg 52558
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 147      atggagatgctgttgggggtgccc 170
                |||||||||||||||||| |||||
Sbjct: 22970456 atggagatgctgttggggatgccc 22970433
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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 140   agattagatggagatgctgttggg 163
             |||| |||||||||||||||||||
Sbjct: 75408 agatcagatggagatgctgttggg 75385
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>dbj|AK109440.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-A07, full
            insert sequence
          Length = 1212

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  agattagatggagatgctgttggg 163
            |||| |||||||||||||||||||
Sbjct: 1125 agatcagatggagatgctgttggg 1102
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>dbj|AK121637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052A03, full
            insert sequence
          Length = 3067

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  agattagatggagatgctgttggg 163
            |||| |||||||||||||||||||
Sbjct: 2960 agatcagatggagatgctgttggg 2937
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 147      atggagatgctgttgggggtgccc 170
                |||||||||||||||||| |||||
Sbjct: 22898647 atggagatgctgttggggatgccc 22898624
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   atggagatgctgttgggggtgccc 170
             |||||||||||||||||| |||||
Sbjct: 79733 atggagatgctgttggggatgccc 79710
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>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete
             sequence
          Length = 140383

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cacagacacacactacacca 77
             ||||||||||||||||||||
Sbjct: 40251 cacagacacacactacacca 40232
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>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA,
            complete cds
          Length = 3054

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 147  atggagatgctgttgggggtgccc 170
            |||||||||||||||||| |||||
Sbjct: 2912 atggagatgctgttggggatgccc 2889
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>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0076N15, complete sequence
          Length = 134307

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 140  agattagatggagatgctgttggg 163
            |||| |||||||||||||||||||
Sbjct: 3386 agatcagatggagatgctgttggg 3363


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,964,939
Number of Sequences: 3902068
Number of extensions: 1964939
Number of successful extensions: 219863
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 219454
Number of HSP's gapped (non-prelim): 393
length of query: 225
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 203
effective length of database: 17,147,199,772
effective search space: 3480881553716
effective search space used: 3480881553716
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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