ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl43h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragm... 48 0.008
2dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome 48 0.008
3gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 44 0.12
4gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 42 0.48
5gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome... 42 0.48
6emb|AL645564.6| Mouse DNA sequence from clone RP23-35N22 on chro... 42 0.48
7gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp... 42 0.48
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.48
9gb|AC158687.2| Mus musculus 10 BAC RP24-423N13 (Roswell Park Can... 42 0.48
10gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 42 0.48
11dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.48
12gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 42 0.48
13gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 1.9
14emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in... 40 1.9
15ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ... 40 1.9
16gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel... 40 1.9
17gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co... 40 1.9
18gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 40 1.9
19gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA 40 1.9
20gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 1.9
21gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 1.9
22gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome... 40 1.9
23gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm... 40 1.9
24emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro... 40 1.9
25emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chr... 40 1.9
26ref|XM_636497.1| Dictyostelium discoideum hypothetical protein (... 38 7.5
27gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosom... 38 7.5
28ref|XM_475051.1| Oryza sativa (japonica cultivar-group), predic... 38 7.5
29ref|NM_191752.1| Oryza sativa (japonica cultivar-group), predic... 38 7.5
30gb|U32514.1|HSMXI1S3 Homo sapiens max interactor 1 (MXI1) gene, ... 38 7.5
31gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 7.5
32gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, co... 38 7.5
33gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N... 38 7.5
34ref|XM_707442.1| Candida albicans SC5314 putative cytosolic ribo... 38 7.5
35ref|XM_707412.1| Candida albicans SC5314 putative cytosolic ribo... 38 7.5
36gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA... 38 7.5
37gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1... 38 7.5
38gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.5
39gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.5
40gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 7.5
41gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, com... 38 7.5
42gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genom... 38 7.5
43gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, com... 38 7.5
44ref|XM_571100.1| Cryptococcus neoformans var. neoformans JEC21 f... 38 7.5
45gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosom... 38 7.5
46emb|Z69885.1|CET04C10 Caenorhabditis elegans Cosmid T04C10, comp... 38 7.5
47gb|AC098744.3| Mus musculus BAC clone RP23-122P15 from 8, comple... 38 7.5
48gb|AC115785.9| Mus musculus chromosome 12, clone RP23-170K17, co... 38 7.5
49gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complet... 38 7.5
50gb|AC158684.7| Mus musculus 6 BAC RP23-332N21 (Roswell Park Canc... 38 7.5
51emb|AL627143.13| Human DNA sequence from clone RP11-14O9 on chro... 38 7.5
52emb|AL606843.16| Human DNA sequence from clone RP11-94F13 on chr... 38 7.5
53emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chr... 38 7.5
54emb|AL360182.15| Human DNA sequence from clone RP11-549L6 on chr... 38 7.5
55gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-1... 38 7.5
56gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA... 38 7.5
57gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar N... 38 7.5
58emb|AL139149.10| Human DNA sequence from clone RP4-660H19 on chr... 38 7.5
59emb|AL050307.13|HSDJ689N3 Human DNA sequence from clone RP4-689N... 38 7.5
60emb|AL031734.9|HS652L8 Human DNA sequence from clone RP4-652L8 o... 38 7.5
61emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome 38 7.5
62emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, ... 38 7.5
63emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor... 38 7.5
64emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,... 38 7.5
65gb|AC161888.5| Mus musculus 6 BAC RP23-448G18 (Roswell Park Canc... 38 7.5
66emb|CR352217.9| Zebrafish DNA sequence from clone CH211-129P13 i... 38 7.5
67gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.5
68gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,... 38 7.5
69gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N... 38 7.5
70gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, comp... 38 7.5
71gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, com... 38 7.5
72gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, co... 38 7.5
73gb|AC097638.2| Homo sapiens chromosome 3 clone RP11-353H3, compl... 38 7.5
74gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, comp... 38 7.5
75gb|DQ363334.1| Filobasidiella neoformans fatty acid synthase bet... 38 7.5
76dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
77dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
78dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
79dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
80dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
81dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
82dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
83gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosom... 38 7.5
84gb|AC013469.8| Homo sapiens BAC clone RP11-463B12 from 2, comple... 38 7.5
85dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
86dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
87gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome 38 7.5
88gb|AF263282.1|AF263282 Filobasidiella neoformans var. neoformans... 38 7.5
89gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, comp... 38 7.5
90dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.5
91dbj|AK065152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.5
92emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 i... 38 7.5
93emb|AJ011417.1|CAL011417 Candida albicans ssm1b gene 38 7.5
94gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ... 38 7.5
95gb|AC148202.3| Carollia perspicillata clone 598J23, complete seq... 38 7.5
96dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP... 38 7.5
97dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 38 7.5
98gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 7.5
99gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.5
100emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial se... 38 7.5
101dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ... 38 7.5
102dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome 38 7.5
103emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 38 7.5
104gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 38 7.5
105gb|AC171405.1| Mus musculus BAC clone RP23-103K10 from chromosom... 38 7.5
106gb|AC152950.2| Mus musculus 10 BAC RP23-138J18 (Roswell Park Can... 38 7.5
107gb|AC153841.1| Mus musculus 6 BAC RP23-260M5 (Roswell Park Cance... 38 7.5
108gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HB... 38 7.5
109gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, com... 38 7.5
110emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chro... 38 7.5
111dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochond... 38 7.5
112gb|AC090159.12| Homo sapiens chromosome 11, clone RP11-406D1, co... 38 7.5

>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA
             polymerase subunit (rpo) genes
          Length = 21245

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 27    atttcagagaagttgcttttgaagtgga 54
             |||||||||||||| |||||||||||||
Sbjct: 10920 atttcagagaagtttcttttgaagtgga 10893



to top

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 48.1 bits (24), Expect = 0.008
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 27    atttcagagaagttgcttttgaagtgga 54
             |||||||||||||| |||||||||||||
Sbjct: 22274 atttcagagaagtttcttttgaagtgga 22247



to top

>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 126   catttgaattttctataaatgt 147
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687



to top

>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   atttgaattttctataaatgt 147
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196



to top

>gb|AC124558.4| Mus musculus BAC clone RP23-248O8 from chromosome 10, complete
            sequence
          Length = 199938

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 12   ggccaagtataagtcatttcagaga 36
            ||||||||| |||||||||||||||
Sbjct: 7822 ggccaagtagaagtcatttcagaga 7846



to top

>emb|AL645564.6| Mouse DNA sequence from clone RP23-35N22 on chromosome 11 Contains part
              of a novel gene and two CpG islands, complete sequence
          Length = 205101

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     tcatttcagagaagttgcttt 45
              |||||||||||||||||||||
Sbjct: 111642 tcatttcagagaagttgcttt 111662



to top

>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  attttctataaatgtgacatt 153
            |||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacatt 1981



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 62       cactcacagatcaacatcatt 82
                |||||||||||||||||||||
Sbjct: 18717892 cactcacagatcaacatcatt 18717872



to top

>gb|AC158687.2| Mus musculus 10 BAC RP24-423N13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 154559

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 12     ggccaagtataagtcatttcagaga 36
              ||||||||| |||||||||||||||
Sbjct: 132926 ggccaagtagaagtcatttcagaga 132950



to top

>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   attttctataaatgtgacatt 153
             |||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacatt 23794



to top

>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    cactcacagatcaacatcatt 82
             |||||||||||||||||||||
Sbjct: 43643 cactcacagatcaacatcatt 43623



to top

>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 128    tttgaattttctataaatgtgacat 152
              |||||| ||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacat 132190



to top

>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   ccatttgaattttctataaa 144
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189



to top

>emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in linkage group 6, complete
              sequence
          Length = 219514

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ataagtcatttcagagaagt 39
              ||||||||||||||||||||
Sbjct: 171568 ataagtcatttcagagaagt 171549



to top

>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  gaattttctataaatgtgac 150
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743



to top

>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gaattttctataaatgtgac 150
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223



to top

>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    tgaattttctataaatgtga 149
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076



to top

>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    catttgaattttctataaat 145
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080



to top

>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  gaattttctataaatgtgac 150
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711



to top

>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    gaattttctataaatgtgac 150
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377



to top

>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tgaattttctataaatgtga 149
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358



to top

>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence
          Length = 155999

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 13     gccaagtataagtcatttcagaga 36
              |||||||||||| |||||||||||
Sbjct: 122000 gccaagtataagccatttcagaga 122023



to top

>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  gaattttctataaatgtgac 150
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699



to top

>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    tttgaattttctataaatgt 147
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461



to top

>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete
              sequence
          Length = 202686

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     gtggacactcaacactcaca 69
              ||||||||||||||||||||
Sbjct: 191713 gtggacactcaacactcaca 191732



to top

>ref|XM_636497.1| Dictyostelium discoideum hypothetical protein (DDB0205976), partial
           mRNA
          Length = 1605

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 116 ttcattgtcccatttgaat 134
           |||||||||||||||||||
Sbjct: 366 ttcattgtcccatttgaat 348



to top

>gb|AC165258.2| Mus musculus BAC clone RP23-127F20 from chromosome 17, complete
             sequence
          Length = 203927

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 128   tttgaattttctataaatg 146
             |||||||||||||||||||
Sbjct: 95019 tttgaattttctataaatg 95037



to top

>ref|XM_475051.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3204

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 32   agagaagttgcttttgaagtgga 54
            ||||||||| |||||||||||||
Sbjct: 2327 agagaagtttcttttgaagtgga 2305



to top

>ref|NM_191752.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2721

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 133  attttctataaatgtgaca 151
            |||||||||||||||||||
Sbjct: 2373 attttctataaatgtgaca 2355



to top

>gb|U32514.1|HSMXI1S3 Homo sapiens max interactor 1 (MXI1) gene, exon 3
          Length = 478

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 105 gaaactggagtttcattgt 123
           |||||||||||||||||||
Sbjct: 25  gaaactggagtttcattgt 7



to top

>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 2       gaaccctcaaggccaagta 20
               |||||||||||||||||||
Sbjct: 1227906 gaaccctcaaggccaagta 1227924



to top

>gb|AC102497.7| Mus musculus chromosome 18, clone RP24-570C15, complete sequence
          Length = 165977

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   tttctataaatgtgacatt 153
             |||||||||||||||||||
Sbjct: 45225 tttctataaatgtgacatt 45243



to top

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
             complete genome
          Length = 134551

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 21566 agagaagtttcttttgaagtgga 21544



to top

>ref|XM_707442.1| Candida albicans SC5314 putative cytosolic ribosomal protein L1
           (CaO19.10969), mRNA
          Length = 654

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  attgtgagaaactggagtt 116
           |||||||||||||||||||
Sbjct: 423 attgtgagaaactggagtt 405



to top

>ref|XM_707412.1| Candida albicans SC5314 putative cytosolic ribosomal protein L1
           (CaO19.3465), mRNA
          Length = 654

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  attgtgagaaactggagtt 116
           |||||||||||||||||||
Sbjct: 423 attgtgagaaactggagtt 405



to top

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
             complete genome
          Length = 134551

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 21566 agagaagtttcttttgaagtgga 21544



to top

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast,
             complete genome
          Length = 134496

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 21524 agagaagtttcttttgaagtgga 21502



to top

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0034M22, complete sequence
          Length = 149435

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 32     agagaagttgcttttgaagtgga 54
              ||||||||| |||||||||||||
Sbjct: 143596 agagaagtttcttttgaagtgga 143574



to top

>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone
            P0508G08, complete sequence
          Length = 141383

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 32   agagaagttgcttttgaagtgga 54
            ||||||||| |||||||||||||
Sbjct: 6683 agagaagtttcttttgaagtgga 6661



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 17957235 agagaagtttcttttgaagtgga 17957257



to top

>gb|AC120856.6| Mus musculus chromosome 1, clone RP23-284B21, complete sequence
          Length = 261249

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Minus

                                           
Query: 104   agaaactggagtttcatt--gtcccatttg 131
             ||||||||||||||||||  ||||||||||
Sbjct: 53656 agaaactggagtttcattaggtcccatttg 53627



to top

>gb|AC099041.7| Oryza sativa chromosome 3 BAC OSJNBa0036E17 genomic sequence, complete
             sequence
          Length = 142896

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 65057 agagaagtttcttttgaagtgga 65035



to top

>gb|AC139934.9| Mus musculus chromosome 12, clone RP23-39G14, complete sequence
          Length = 312488

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 130    tgaattttctataaatgtg 148
              |||||||||||||||||||
Sbjct: 281166 tgaattttctataaatgtg 281184



to top

>ref|XM_571100.1| Cryptococcus neoformans var. neoformans JEC21 fatty-acid synthase
            complex protein (CNE04370) partial mRNA
          Length = 7692

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    gaaccctcaaggccaagta 20
            |||||||||||||||||||
Sbjct: 6446 gaaccctcaaggccaagta 6464



to top

>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete
             sequence
          Length = 216834

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 101   gtgagaaactggagtttca 119
             |||||||||||||||||||
Sbjct: 78487 gtgagaaactggagtttca 78469



to top

>emb|Z69885.1|CET04C10 Caenorhabditis elegans Cosmid T04C10, complete sequence
          Length = 20958

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 54    acactcaacactcacagat 72
             |||||||||||||||||||
Sbjct: 10014 acactcaacactcacagat 9996



to top

>gb|AC098744.3| Mus musculus BAC clone RP23-122P15 from 8, complete sequence
          Length = 204779

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Minus

                                            
Query: 104    agaaactggagtttcatt--gtcccatttg 131
              ||||||||||||||||||  ||||||||||
Sbjct: 100540 agaaactggagtttcattaggtcccatttg 100511



to top

>gb|AC115785.9| Mus musculus chromosome 12, clone RP23-170K17, complete sequence
          Length = 261721

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 130   tgaattttctataaatgtg 148
             |||||||||||||||||||
Sbjct: 87372 tgaattttctataaatgtg 87390



to top

>gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complete sequence
          Length = 136006

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 130   tgaattttctataaatgtg 148
             |||||||||||||||||||
Sbjct: 12048 tgaattttctataaatgtg 12030



to top

>gb|AC158684.7| Mus musculus 6 BAC RP23-332N21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 210307

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     gaagtggacactcaacact 65
              |||||||||||||||||||
Sbjct: 170547 gaagtggacactcaacact 170529



to top

>emb|AL627143.13| Human DNA sequence from clone RP11-14O9 on chromosome X Contains the
            3' end of the RP2 gene for retinitis pigmentosa 2
            (X-linked recessive), a novel gene, the 5' end of a novel
            gene (KIAA0215) and a CpG island, complete sequence
          Length = 81195

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 129  ttgaattttctataaatgt 147
            |||||||||||||||||||
Sbjct: 1837 ttgaattttctataaatgt 1855



to top

>emb|AL606843.16| Human DNA sequence from clone RP11-94F13 on chromosome 1 Contains a
             proteasome (prosome, macropain) 26S subunit ATPase 1
             (PSMC10 pseudogene, complete sequence
          Length = 96028

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 127   atttgaattttctataaat 145
             |||||||||||||||||||
Sbjct: 29976 atttgaattttctataaat 29994



to top

>emb|AL590115.7| Human DNA sequence from clone RP11-255O17 on chromosome 1 Contains a
              novel gene, the LHX9 gene for LIM homeobox 9 and a CpG
              island, complete sequence
          Length = 182527

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 129    ttgaattttctataaatgt 147
              |||||||||||||||||||
Sbjct: 158626 ttgaattttctataaatgt 158644



to top

>emb|AL360182.15| Human DNA sequence from clone RP11-549L6 on chromosome 10 Contains the
             MXI1 gene for MAX interacting protein 1 (MAD2,MXD2), a
             ribosomal protein L21 (RPL21) pseudogene, a novel gene,
             the SPF30 gene for splicing factor 30, survival of motor
             neuron-related (SMNR) and three CpG islands, complete
             sequence
          Length = 145256

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   gaaactggagtttcattgt 123
             |||||||||||||||||||
Sbjct: 64195 gaaactggagtttcattgt 64177



to top

>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion,
              complete genome
          Length = 491515

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     agagaagttgcttttgaagtgga 54
              ||||||||| |||||||||||||
Sbjct: 293031 agagaagtttcttttgaagtgga 293053



to top

>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion,
              complete genome
          Length = 490673

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     agagaagttgcttttgaagtgga 54
              ||||||||| |||||||||||||
Sbjct: 292221 agagaagtttcttttgaagtgga 292243



to top

>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion,
              complete genome
          Length = 490669

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     agagaagttgcttttgaagtgga 54
              ||||||||| |||||||||||||
Sbjct: 292218 agagaagtttcttttgaagtgga 292240



to top

>emb|AL139149.10| Human DNA sequence from clone RP4-660H19 on chromosome 1p31.1-31.3
             Contains a novel gene, complete sequence
          Length = 21958

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 20    ataagtcatttcagagaagttgc 42
             ||||||||||||| |||||||||
Sbjct: 17527 ataagtcatttcaaagaagttgc 17549



to top

>emb|AL050307.13|HSDJ689N3 Human DNA sequence from clone RP4-689N3 on chromosome Xp11.1-11.4
           Contains the 5' end of the RP2 gene for retinitis
           pigmentosa 2 (X-linked recessive), the 5' end of the
           SLC9A7 gene for solute carrier family 9 (sodium/hydrogen
           exchanger), isoform 7 (NHE7), and two CpG Islands,
           complete sequence
          Length = 121502

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 129 ttgaattttctataaatgt 147
           |||||||||||||||||||
Sbjct: 164 ttgaattttctataaatgt 146



to top

>emb|AL031734.9|HS652L8 Human DNA sequence from clone RP4-652L8 on chromosome 1q24.1-25.2
              Contains a novel gene, the 5' end of the PLAC3 gene for
              placenta-specific 3 (PLAC3) and a protein tyrosine
              phosphatase type IVA (member 1) (PTP4A1) pseudogene,
              complete sequence
          Length = 168835

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     tgaagtggacactcaacac 64
              |||||||||||||||||||
Sbjct: 148022 tgaagtggacactcaacac 148004



to top

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 23818 agagaagtttcttttgaagtgga 23796



to top

>emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, rpoC1 gene, rpoC2 gene and
            rps2 gene for transfer RNA-Cys, RNA polymerase subunits
            beta, beta-1, beta-2 and ribosomal protein S2
            respectively
          Length = 12503

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 32   agagaagttgcttttgaagtgga 54
            ||||||||| |||||||||||||
Sbjct: 3732 agagaagtttcttttgaagtgga 3710



to top

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 21564 agagaagtttcttttgaagtgga 21542



to top

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 32     agagaagttgcttttgaagtgga 54
              ||||||||| |||||||||||||
Sbjct: 104937 agagaagtttcttttgaagtgga 104915



to top

>gb|AC161888.5| Mus musculus 6 BAC RP23-448G18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 189867

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     gaagtggacactcaacact 65
              |||||||||||||||||||
Sbjct: 109727 gaagtggacactcaacact 109709



to top

>emb|CR352217.9| Zebrafish DNA sequence from clone CH211-129P13 in linkage group 15,
              complete sequence
          Length = 162948

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 133    attttctataaatgtgaca 151
              |||||||||||||||||||
Sbjct: 151722 attttctataaatgtgaca 151704



to top

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 19779 agagaagtttcttttgaagtgga 19757



to top

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 85897 agagaagtttcttttgaagtgga 85875



to top

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 94712 agagaagtttcttttgaagtgga 94690



to top

>gb|AC104184.2| Homo sapiens chromosome 3 clone RP11-188P20, complete sequence
          Length = 143034

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 21     taagtcatttcagagaagt 39
              |||||||||||||||||||
Sbjct: 113153 taagtcatttcagagaagt 113171



to top

>gb|AC024474.8| Homo sapiens chromosome 15, clone RP11-686I6, complete sequence
          Length = 194973

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 129    ttgaattttctataaatgt 147
              |||||||||||||||||||
Sbjct: 167857 ttgaattttctataaatgt 167839



to top

>gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, complete sequence
          Length = 191464

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 115   tttcattgtcccatttgaatttt 137
             ||||||||||| |||||||||||
Sbjct: 71160 tttcattgtccgatttgaatttt 71138



to top

>gb|AC097638.2| Homo sapiens chromosome 3 clone RP11-353H3, complete sequence
          Length = 170330

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 21     taagtcatttcagagaagt 39
              |||||||||||||||||||
Sbjct: 141793 taagtcatttcagagaagt 141775



to top

>gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, complete sequence
          Length = 183494

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 113   agtttcattgtcccatttg 131
             |||||||||||||||||||
Sbjct: 58321 agtttcattgtcccatttg 58303



to top

>gb|DQ363334.1| Filobasidiella neoformans fatty acid synthase beta subunit (FAS1)
            gene, complete cds
          Length = 10068

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 2    gaaccctcaaggccaagta 20
            |||||||||||||||||||
Sbjct: 7457 gaaccctcaaggccaagta 7475



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 32      agagaagttgcttttgaagtgga 54
               ||||||||| |||||||||||||
Sbjct: 9250816 agagaagtttcttttgaagtgga 9250794



 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 32      agagaagttgcttttgaagtgga 54
               ||||||||| |||||||||||||
Sbjct: 9146911 agagaagtttcttttgaagtgga 9146889



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 13391847 agagaagtttcttttgaagtgga 13391869



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 10313387 agagaagtttcttttgaagtgga 10313365



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 12846137 agagaagtttcttttgaagtgga 12846115



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 17950776 agagaagtttcttttgaagtgga 17950798



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 14374778 agagaagtttcttttgaagtgga 14374800



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 133      attttctataaatgtgaca 151
                |||||||||||||||||||
Sbjct: 29762090 attttctataaatgtgaca 29762072



to top

>gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosome 13, complete sequence
          Length = 202134

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 30     tcagagaagttgcttttga 48
              |||||||||||||||||||
Sbjct: 157718 tcagagaagttgcttttga 157736



to top

>gb|AC013469.8| Homo sapiens BAC clone RP11-463B12 from 2, complete sequence
          Length = 171419

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 104   agaaactggagtttcattg 122
             |||||||||||||||||||
Sbjct: 49565 agaaactggagtttcattg 49583



to top

>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683B11
          Length = 155955

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 133  attttctataaatgtgaca 151
            |||||||||||||||||||
Sbjct: 6185 attttctataaatgtgaca 6167



to top

>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 133   attttctataaatgtgaca 151
             |||||||||||||||||||
Sbjct: 91821 attttctataaatgtgaca 91803



to top

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 23815 agagaagtttcttttgaagtgga 23793



to top

>gb|AF263282.1|AF263282 Filobasidiella neoformans var. neoformans clone CRYP01, complete
             sequence
          Length = 109900

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     gaaccctcaaggccaagta 20
             |||||||||||||||||||
Sbjct: 17701 gaaccctcaaggccaagta 17683



to top

>gb|AC154121.6| Mus musculus chromosome 1, clone RP24-93A17, complete sequence
          Length = 228353

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Plus

                                            
Query: 104    agaaactggagtttcatt--gtcccatttg 131
              ||||||||||||||||||  ||||||||||
Sbjct: 111806 agaaactggagtttcattaggtcccatttg 111835



to top

>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0022A24
          Length = 148347

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 96700 agagaagtttcttttgaagtgga 96722



to top

>dbj|AK065152.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002B10, full
            insert sequence
          Length = 4179

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 133  attttctataaatgtgaca 151
            |||||||||||||||||||
Sbjct: 3452 attttctataaatgtgaca 3434



to top

>emb|BX914195.11| Zebrafish DNA sequence from clone CH211-170L6 in linkage group 18,
              complete sequence
          Length = 156691

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 133    attttctataaatgtgaca 151
              |||||||||||||||||||
Sbjct: 113724 attttctataaatgtgaca 113706



to top

>emb|AJ011417.1|CAL011417 Candida albicans ssm1b gene
          Length = 1146

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 98  attgtgagaaactggagtt 116
           |||||||||||||||||||
Sbjct: 825 attgtgagaaactggagtt 807



to top

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 25189 agagaagtttcttttgaagtgga 25211



to top

>gb|AC148202.3| Carollia perspicillata clone 598J23, complete sequence
          Length = 130753

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   tttcattgtcccatttgaa 133
             |||||||||||||||||||
Sbjct: 62324 tttcattgtcccatttgaa 62342



to top

>dbj|AP006296.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-137N23, complete
             sequence
          Length = 57462

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 128   tttgaattttctataaatg 146
             |||||||||||||||||||
Sbjct: 16301 tttgaattttctataaatg 16319



to top

>dbj|AP001786.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-176J24, complete
              sequences
          Length = 171744

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     aaggcaattgtgagaaact 110
              |||||||||||||||||||
Sbjct: 107765 aaggcaattgtgagaaact 107783



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 10319426 agagaagtttcttttgaagtgga 10319404



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 32       agagaagttgcttttgaagtgga 54
                ||||||||| |||||||||||||
Sbjct: 13346121 agagaagtttcttttgaagtgga 13346143



to top

>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104259

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 41133 agagaagtttcttttgaagtgga 41111



to top

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 24270 agagaagtttcttttgaagtgga 24248



to top

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 32    agagaagttgcttttgaagtgga 54
             ||||||||| |||||||||||||
Sbjct: 21498 agagaagtttcttttgaagtgga 21476



to top

>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    aacactcacagatcaacat 78
             |||||||||||||||||||
Sbjct: 29969 aacactcacagatcaacat 29987



to top

>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 115     tttcattgtcccatttgaa 133
               |||||||||||||||||||
Sbjct: 1222039 tttcattgtcccatttgaa 1222057



to top

>gb|AC171405.1| Mus musculus BAC clone RP23-103K10 from chromosome 17, complete
             sequence
          Length = 181342

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Plus

                                           
Query: 104   agaaactggagtttcatt--gtcccatttg 131
             ||||||||||||||||||  ||||||||||
Sbjct: 94631 agaaactggagtttcattaggtcccatttg 94660



to top

>gb|AC152950.2| Mus musculus 10 BAC RP23-138J18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 181465

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Plus

                                            
Query: 104    agaaactggagtttcatt--gtcccatttg 131
              ||||||||||||||||||  ||||||||||
Sbjct: 140160 agaaactggagtttcattaggtcccatttg 140189



to top

>gb|AC153841.1| Mus musculus 6 BAC RP23-260M5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190541

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 55     cactcaacactcacagatcaaca 77
              ||||| |||||||||||||||||
Sbjct: 114410 cactcgacactcacagatcaaca 114432



to top

>gb|AC171730.1| Lycopersicon esculentum chromosome 01 clone C01HBa0256E08, complete
             sequence
          Length = 147630

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 125   ccatttgaattttctataa 143
             |||||||||||||||||||
Sbjct: 53107 ccatttgaattttctataa 53125



to top

>gb|AC127522.7| Homo sapiens chromosome 15, clone RP13-126C7, complete sequence
          Length = 166914

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 129    ttgaattttctataaatgt 147
              |||||||||||||||||||
Sbjct: 117972 ttgaattttctataaatgt 117954



to top

>emb|AL645586.9| Mouse DNA sequence from clone RP23-302O5 on chromosome X, complete
              sequence
          Length = 202500

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 28/30 (93%), Gaps = 2/30 (6%)
 Strand = Plus / Plus

                                            
Query: 104    agaaactggagtttcatt--gtcccatttg 131
              ||||||||||||||||||  ||||||||||
Sbjct: 105777 agaaactggagtttcattaggtcccatttg 105806



to top

>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome
          Length = 490520

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     agagaagttgcttttgaagtgga 54
              ||||||||| |||||||||||||
Sbjct: 292070 agagaagtttcttttgaagtgga 292092



to top

>gb|AC090159.12| Homo sapiens chromosome 11, clone RP11-406D1, complete sequence
          Length = 173557

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     cagagaagttgcttttgaa 49
              |||||||||||||||||||
Sbjct: 101654 cagagaagttgcttttgaa 101636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,886,275
Number of Sequences: 3902068
Number of extensions: 1886275
Number of successful extensions: 139563
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 139036
Number of HSP's gapped (non-prelim): 533
length of query: 156
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 134
effective length of database: 17,147,199,772
effective search space: 2297724769448
effective search space used: 2297724769448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top