Clone Name | rbastl43g07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CFA_ECOLI (P0A9H7) Cyclopropane-fatty-acyl-phospholipid synthase... | 32 | 0.62 | 2 | CFA_ECOL6 (P0A9H8) Cyclopropane-fatty-acyl-phospholipid synthase... | 32 | 0.62 | 3 | COG1_YEAST (P53079) Conserved oligomeric Golgi complex component... | 30 | 2.3 | 4 | CFA_CITFR (P45509) Cyclopropane-fatty-acyl-phospholipid synthase... | 29 | 5.2 |
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>CFA_ECOLI (P0A9H7) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) Length = 381 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 443 LALGFDDKFMRIWEYYLIFSAACFKLRALGDYQVVFSR 330 +A + ++F R++ YYL A F+ R + +QVVFSR Sbjct: 334 IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR 371
>CFA_ECOL6 (P0A9H8) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) Length = 381 Score = 32.3 bits (72), Expect = 0.62 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = -1 Query: 443 LALGFDDKFMRIWEYYLIFSAACFKLRALGDYQVVFSR 330 +A + ++F R++ YYL A F+ R + +QVVFSR Sbjct: 334 IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSR 371
>COG1_YEAST (P53079) Conserved oligomeric Golgi complex component 1 (Complexed| with DOR1 protein 3) Length = 417 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = -2 Query: 253 LLDSLRSFNKSTLEW-----FLHTGSLIRWFGDLSSCFNHEMF 140 L+DS+++ N + L+W L+T +W DL S FN +F Sbjct: 169 LVDSMKTLNLTLLQWVKLYNLLNTEFSSKWDDDLLSIFNESLF 211
>CFA_CITFR (P45509) Cyclopropane-fatty-acyl-phospholipid synthase (EC| 2.1.1.79) (Cyclopropane fatty acid synthase) (CFA synthase) (Fragment) Length = 89 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = -1 Query: 443 LALGFDDKFMRIWEYYLIFSAACFKLRALGDYQVVFSR 330 L+ + F R++ YYL A F+ R + +QV+FSR Sbjct: 42 LSSRYSATFRRMFNYYLCACAGAFRARDIELWQVLFSR 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,867,974 Number of Sequences: 219361 Number of extensions: 1210949 Number of successful extensions: 2619 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2563 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2619 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)