>KINH_MOUSE (Q61768) Kinesin heavy chain (Ubiquitous kinesin heavy chain)|
           (UKHC)
          Length = 963

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = +3

Query: 123 QDNIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHKKLVDSTNDEL-WKEKQASTLQPQ 299
           Q+ +H   K   N    + E   A   ++  ++  H+K + S  DE+  KEK  + LQ Q
Sbjct: 677 QEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRETHQKQISSLRDEVEAKEKLITDLQDQ 736

Query: 300 NRR 308
           N++
Sbjct: 737 NQK 739

>YIF5_YEAST (P40523) Hypothetical 70.7 kDa protein in SNP1-GPP1 intergenic|
           region
          Length = 627

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +3

Query: 129 NIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHKKLVDSTNDELWKEKQAS 284
           NI +TS    NGD ++L+A N  T    Q +I HK+L    N++ ++++  +
Sbjct: 343 NIPTTST---NGDDRALQAKNGGTITPSQTQINHKRLKHIFNEKSFRKQMTN 391

>KINH_HUMAN (P33176) Kinesin heavy chain (Ubiquitous kinesin heavy chain)|
           (UKHC)
          Length = 963

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 123 QDNIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHKKLVDSTNDEL-WKEKQASTLQPQ 299
           Q+ +H   K   N    + E   A   ++  ++  H+K + S  DE+  K K  + LQ Q
Sbjct: 677 QEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHRETHQKQISSLRDEVEAKAKLITDLQDQ 736

Query: 300 NRR 308
           N++
Sbjct: 737 NQK 739

>ZG14_HUMAN (Q9Y3A4) Gastric cancer antigen Zg14|
          Length = 280

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +1

Query: 103 PKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTKNWLT 246
           PK +  +++ Y + QKP G++    LK P+     S  ++     W++
Sbjct: 110 PKPVPGFQVAYVVFQKPSGVSAALALKGPLLVSTESHPVKSGIHKWIS 157

>CUT20_SCHPO (O42839) 20S cyclosome/APC complex protein cut20 (Cell untimely|
           torn protein 20)
          Length = 719

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = +3

Query: 138 STSKTIWNGDHQSLEATNACTNE-----LPQNKIQHKKLVDSTNDELWKEKQAS 284
           S S+ IW+ D   LEAT  C N      +   K    K++DS+   L +++ AS
Sbjct: 56  SNSQRIWDVDFHDLEATELCWNHDGNLIVVGFKNGELKIIDSSTGHLVEQRPAS 109

>ZG14_MOUSE (Q9D1C9) Gastric cancer antigen Zg14 homolog|
          Length = 280

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +1

Query: 103 PKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTKNWLT 246
           PK +  +++ Y + QKP G++    LK P+     S  ++     W++
Sbjct: 110 PKPVPGFQVAYVVFQKPSGVSAALNLKGPLLVSTESHLVKSGIHKWIS 157

>XKR7_PANTR (Q49LS1) XK-related protein 7|
          Length = 579

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 24/70 (34%), Positives = 30/70 (42%)
 Frame = -3

Query: 222 SYSGGVHLCMHWSLQGIGGRHSIWFLM*SVYYLVFKYDFGACCVKDVREMAKIVVG*VEQ 43
           SY G V   + W L  I  R   + L  SVY L F    G C V     M   V+     
Sbjct: 295 SYKGAVAQVL-WHLFSIAARGLAFALFASVYKLYF----GICIVGHWSVMTFWVIQGETD 349

Query: 42  WCISFGNEIV 13
           +C+S G EI+
Sbjct: 350 FCMSKGEEII 359

>LNT_RICCN (Q92IC5) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 499

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +3

Query: 111 HI*IQDNIHSTSKTIWNGDHQSLEATNACTNELPQNKIQHKKLVDSTN 254
           HI + +N+  T   IW+      EA     +++PQ K +  K+++STN
Sbjct: 242 HINLSENLEPTDLIIWS------EAALVVPDDIPQVKSKLLKMLNSTN 283

>FAD3C_BRANA (P48618) Omega-3 fatty acid desaturase, chloroplast precursor (EC|
           1.14.19.-) (Fragment)
          Length = 404

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 205 NSPRIRFNTKNW---LTVPMTNYGKKSKPQPCSHKTE 306
           +SPR R N++NW   +T P+T     S P     KT+
Sbjct: 8   SSPRFRLNSRNWALNVTTPLTVDSSSSPPIEEEPKTQ 44

>POLR_KYMVJ (P36304) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1874

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +1

Query: 10  HNNLITKTDAPLFNSTDNNFRHFPYIFDAASPKIIFEYKIIYTLHQKP 153
           HN  +T TD+  F ST  +  + P++F   +       +I++  HQ P
Sbjct: 114 HNYRLTPTDSVRFPSTSPHLPNTPFVFMHDALMYYQPEQILHLFHQVP 161

>CHBBA_CROHO (P81508) CHH-B alpha subunit|
          Length = 127

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 271 KSKPQPCSHKTEENYVDRMDCSM 339
           ++K QPCS    EN VD  DC M
Sbjct: 75  QNKGQPCSSIYSENLVDPFDCFM 97

>UL49_HHV6U (P52441) Protein U33|
          Length = 470

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 253 MTNYGKKSKPQPCSHKTEENYVDRMDCSMSCCCGCRV 363
           + ++G   + Q C H   E  +D  DC ++ C GC++
Sbjct: 428 LVSHGSDFQCQRCQHSFRETCLDLEDC-VNICQGCQI 463

>RNF12_HUMAN (Q9NVW2) RING finger protein 12 (LIM domain-interacting RING finger|
           protein) (RING finger LIM domain-binding protein)
           (R-LIM) (NY-REN-43 antigen)
          Length = 624

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 244 TVPMTNY--GKKSKPQPCSHKTEENYVDRMDCSMSCCCGCR 360
           +V +T Y  G K +  PCSH+   + +DR     S C  CR
Sbjct: 571 SVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611

>ZG14_PONPY (Q5RA17) Gastric cancer antigen Zg14 homolog|
          Length = 280

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +1

Query: 103 PKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTKNWLT 246
           PK +  +++ Y + QKP G++    L+ P+     S  ++     W++
Sbjct: 110 PKPVPGFRVGYVVFQKPSGVSAALALQGPLLVSTESHPVKTGIHKWIS 157

>ZN11B_HUMAN (Q06732) Zinc finger protein 11B|
          Length = 778

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 151 PYGMATTNPLKRPMHAQMNSPRIRFNTKNWLTVPMTNY-GKKS 276
           P+ M  ++   R M  Q +S  + FNT + L +   NY GKKS
Sbjct: 125 PFNMDVSSFPSRKMFCQYDSRGMSFNTVSELVISKINYLGKKS 167

>NFAC3_HUMAN (Q12968) Nuclear factor of activated T-cells, cytoplasmic 3|
           (NF-ATc3) (NFATc3) (T cell transcription factor NFAT4)
           (NF-AT4) (NFATx)
          Length = 1075

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +1

Query: 136 TLHQKPYGMA-TTNPLKRPMHAQMNSPRIRFNTKNWLTVPMTNYGKKSKP-QPCSHK 300
           T HQ+ YG+  + +P + P H    SPR     +NWL+ P    G  S+P  PC  +
Sbjct: 224 TWHQQ-YGLGHSLSPRQSPCH----SPRSSVTDENWLS-PRPASGPSSRPTSPCGKR 274

>PALB_DEBHA (Q6BH66) Calpain-like protease palB/RIM13 (EC 3.4.22.-) (Cysteine|
           protease RIM13)
          Length = 764

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
 Frame = +1

Query: 55  TDNNFRHFPYIFDAASPKIIFEYKIIYTLHQKPYGMATTNPLKRPMHAQMNSPRIRFNTK 234
           +D +  HF Y +   +P   F+YK   T          T+  ++P  + +N      N  
Sbjct: 352 SDQDLHHFKYFYINWNPNAFFKYKFHMTFIYNVKDNTGTHMYQKPQFSLLNPTEDSQNV- 410

Query: 235 NWLT----VPMTNYGKK 273
            WL     +P+ N+ ++
Sbjct: 411 -WLLLEKHLPLKNFSEQ 426


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,286,588
Number of Sequences: 219361
Number of extensions: 1082757
Number of successful extensions: 3093
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3093
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)